KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:15 2014 Check: 00 .. Name: bmy_11679T0/1-286 Len: 557 Check: 4707 Weight: 1.00 Name: ENSTTRP00000007949/1-519 Len: 557 Check: 7897 Weight: 1.00 Name: BACU009505/1-466 Len: 557 Check: 5031 Weight: 1.00 Name: ENSP00000366093/1-459 Len: 557 Check: 701 Weight: 1.00 Name: ENSBTAP00000028921/1-459 Len: 557 Check: 77 Weight: 1.00 // 1 50 bmy_11679T0/1-286 ---------- ---------- ---------- --MAGRGGKG DRRAKRKQLR ENSTTRP00000007949/1-519 QRRQQTSPSG HGVHLKGWFS RQSSSSPTTF LTRAERDFWA LRGSGWEQLH BACU009505/1-466 ---------- ---------- ---------- ---------- ---------- ENSP00000366093/1-459 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028921/1-459 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_11679T0/1-286 K--LKNVCFP LSAQIEVIPC KICGDKSSGI HYGVITCEGC KSSSIKTDEL ENSTTRP00000007949/1-519 DYAERESGYT MRXXXXXXXX XXXXXXXXXX XXXXXXXXXX X--------- BACU009505/1-466 ---MDGFGPG SQAQIEVIPC KICGDKSSGI HYGVITCEGC K--------- ENSP00000366093/1-459 ---------- MRAQIEVIPC KICGDKSSGI HYGVITCEGC K--------- ENSBTAP00000028921/1-459 ---------- MRAQIEVIPC KICGDKSSGI HYGVITCEGC K--------- 101 150 bmy_11679T0/1-286 RLCLLTAFTG FFRRSQQNNA SYSCPRQRNC LIDRTNRNRC QHCRLQKFAN ENSTTRP00000007949/1-519 ---------G FFRRSQQNNA SYSCPRQRNC LIDRTNRNRC QHCRLQK--- BACU009505/1-466 ---------G FFRRSQQNNA SYSCPRQRNC LIDRTNRNRC QHCRLQK--- ENSP00000366093/1-459 ---------G FFRRSQQNNA SYSCPRQRNC LIDRTNRNRC QHCRLQK--- ENSBTAP00000028921/1-459 ---------G FFRRSQQNNA SYSCPRQRNC LIDRTNRNRC QHCRLQK--- 151 200 bmy_11679T0/1-286 HIHLLLGKKE RGNMPSNIVS MRNTSITVKF GRMSKKQRDS LYAEVQKHQQ ENSTTRP00000007949/1-519 ---------- -------CLA LGMSRDAVKF GRMSKKQRDS LYAEVQKHQQ BACU009505/1-466 ---------- -------CLA LGMSRDAVKF GRMSKKQRDS LYAEVQKHQQ ENSP00000366093/1-459 ---------- -------CLA LGMSRDAVKF GRMSKKQRDS LYAEVQKHQQ ENSBTAP00000028921/1-459 ---------- -------CLA LGMSRDAVKF GRMSKKQRDS LYAEVQKHQQ 201 250 bmy_11679T0/1-286 RLQEQRQQQG GEAEALARVY GSGVSNGLSS LNSEASGTYA NGHVMDLPKS ENSTTRP00000007949/1-519 RLQEQRQQQS GEAEALARVY SSSISNGLSN LSNEASGTYA NGHVMDLPKS BACU009505/1-466 RLQEQRQQQS GEAEALARVY SSGVSNGLSS LNSEASGTYA NGHVMDLPKS ENSP00000366093/1-459 RLQEQRQQQS GEAEALARVY SSSISNGLSN LNNETSGTYA NGHVIDLPKS ENSBTAP00000028921/1-459 RLQEQRQQQS GEAEALARVY GSSISNGLSN LNNEASGTYA NGHVIDLPKS 251 300 bmy_11679T0/1-286 EGYYSVDSGQ PSPDQSGLDM TGIKQIKQEP IYDLTSVPNL FTYSSFNNGQ ENSTTRP00000007949/1-519 EGYYNVDSGQ PSPDQSGLDV TGIKQIKQEP IYDLTSVPNL FTYSSFNNGQ BACU009505/1-466 EGYYSVDSGQ PSPDQSGLDM TGIKQIKQEP IYDLTSVPNL FTYSSFNNGQ ENSP00000366093/1-459 EGYYNVDSGQ PSPDQSGLDM TGIKQIKQEP IYDLTSVPNL FTYSSFNNGQ ENSBTAP00000028921/1-459 EGYYNVDSGQ PSPDQSGLDM TGIKQIKQEP IYDLTSVPNL FTYSSFNNGQ 301 350 bmy_11679T0/1-286 LAPGITMTEI ---------- ---------- ---------- ---------- ENSTTRP00000007949/1-519 LAPGITMTEI DRIAQNIIKS HLETCQYTME ELHQLAWQIH TYEEIKAYQS BACU009505/1-466 LAPGITMTEI DRIAQNIIKS HLETCQYTME ELHQLAWQIH TYEEIKAYQS ENSP00000366093/1-459 LAPGITMTEI DRIAQNIIKS HLETCQYTME ELHQLAWQTH TYEEIKAYQS ENSBTAP00000028921/1-459 LAPGITMSEI DRIAQNIIKS HLETCQYTME ELHQLAWQTH TYEEIKAYQS 351 400 bmy_11679T0/1-286 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007949/1-519 KSREALWQQC AIQITHAIQY VVEFAKRITG FMELCQNDQI LLLKSGCLEV BACU009505/1-466 KSREALWQQC AIQITHAIQY VVEFAKRITG FMELCQNDQI LLLKSGCLEV ENSP00000366093/1-459 KSREALWQQC AIQITHAIQY VVEFAKRITG FMELCQNDQI LLLKSGCLEV ENSBTAP00000028921/1-459 KSREALWQQC AIQITHAIQY VVEFAKRITG FMELCQNDQI LLLKSGCLEV 401 450 bmy_11679T0/1-286 ---------- --ANSSITEA EY-------- ---------- ---------- ENSTTRP00000007949/1-519 VLVRMCRAFN PLNNTVLFEG KYGGMQMFKA LGSDDLVNEA FDFAKNLCSL BACU009505/1-466 VLVRMCRAFN PLNNTVLFEG KYGGMQMFKA LGSDDLVNEA FDFAKNLCSL ENSP00000366093/1-459 VLVRMCRAFN PLNNTVLFEG KYGGMQMFKA LGSDDLVNEA FDFAKNLCSL ENSBTAP00000028921/1-459 VLVRMCRAFN PLNNTVLFEG KYGGMQMFKA LGSDDLVNEA FDFAKNLCSL 451 500 bmy_11679T0/1-286 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007949/1-519 QLTEEEIALF SSAVLISPDR AWLIEPRKVQ KLQEKIYFAL QHVIQKNHLD BACU009505/1-466 QLTEEEIALF SSAVLISPDR AWLIEPRKVQ KLQEKIYFAL QHVIQKNHLD ENSP00000366093/1-459 QLTEEEIALF SSAVLISPDR AWLIEPRKVQ KLQEKIYFAL QHVIQKNHLD ENSBTAP00000028921/1-459 QLTEEEIALF SSAVLISPDR AWLIEPRKVQ KLQEKIYFAL QHVIQKNHLD 501 550 bmy_11679T0/1-286 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007949/1-519 DETLAKLIAK IPTITAVCNL HGEKLQVFKQ SHPDIVNTLF PPLYKELFNP BACU009505/1-466 DETLAKLIAK IPTITAVCNL HGEKLQVFKQ SHPDIVNTLF PPLYKELFNP ENSP00000366093/1-459 DETLAKLIAK IPTITAVCNL HGEKLQVFKQ SHPEIVNTLF PPLYKELFNP ENSBTAP00000028921/1-459 DETLAKLIAK IPTITAVCNL HGEKLQVFKQ SHPDIVNTLF PPLYKELFNP 551 600 bmy_11679T0/1-286 ------- ENSTTRP00000007949/1-519 DCATVCK BACU009505/1-466 DCATVCK ENSP00000366093/1-459 DCATGCK ENSBTAP00000028921/1-459 DCATVCK