KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:20 2014 Check: 00 .. Name: ENSP00000307713/1-391 Len: 395 Check: 8639 Weight: 1.00 Name: ENSBTAP00000028949/1-388 Len: 395 Check: 6369 Weight: 1.00 Name: ENSTTRP00000003302/1-392 Len: 395 Check: 5456 Weight: 1.00 Name: bmy_13126T0/1-379 Len: 395 Check: 3265 Weight: 1.00 Name: BACU007712/1-360 Len: 395 Check: 8598 Weight: 1.00 // 1 50 ENSP00000307713/1-391 MFSPWKISMF LSVREDSVPT TASFSADMLN VTLQ--GPTL NGTFAQ-SKC ENSBTAP00000028949/1-388 MFSAWRRPMF LSIHEDTVPT TASFGAEMFN LTSQVLEPAL NGTLPEGSSC ENSTTRP00000003302/1-392 VFSAWKRSMI QSVHEDAVPT TASFSAKMFN VTLQALEPAL NGTPPQSSSC bmy_13126T0/1-379 --------MI QSVHEDAVPT TASFSAKMFN ITSQVLEPAL AGTPPQSSGC BACU007712/1-360 ---------- ---------- -------MFN ITSQVLEPAL TGTPPQSSGC 51 100 ENSP00000307713/1-391 PQVEWLGWLN TIQPPFLWVL FVLATLENIF VLSVFCLHKS SCTVAEIYLG ENSBTAP00000028949/1-388 FQSDLWNWLN TIQPPFLWIL FLLAALENTF VLSVFCLHKS SCTVAEIYLG ENSTTRP00000003302/1-392 VHSDWWSSLN TIQPPFLWVL FILAALENAF VLSVFCLHRS SCTVAEVYLG bmy_13126T0/1-379 VHSDWWSWLN IIQSPFLWVL FILAALENVF VLSVFCLHKS SCTVAEVYLG BACU007712/1-360 VHSDWWSWLN TIQSPFLWVL FILAALENVF VLSVFCLHKS SCTVAEVYLG 101 150 ENSP00000307713/1-391 NLAAADLILA CGLPFWAITI SNNFDWLFGE TLCRVVNAII SMNLYSSICF ENSBTAP00000028949/1-388 NLAVADLILA CGLPFWAITI ANNFDWLFGE ALCRVVNTIL YMNLYSSIYF ENSTTRP00000003302/1-392 NLAAADLLLA CGLPFWAITI ANNFDWLFGE VLCRVVNTVL YMNLYSSICF bmy_13126T0/1-379 NLAAADLLLA CGLPFWAITI ANNFDWLFGE VLCRVVNAAL YMNLYSSICF BACU007712/1-360 NLAAADLLLA CGLPFWAITI ANNFDWLFGE VLCRVVNAAL YMNLYSSICF 151 200 ENSP00000307713/1-391 LMLVSIDRYL ALVKTMSMGR MRGVRWAKLY SLVIWGCTLL LSSPMLVFRT ENSBTAP00000028949/1-388 LMLVSIDRYL ALVKTMSMGR MRGVRWAKLY SLVIWGCALL LSSPMLAFRT ENSTTRP00000003302/1-392 LMLVSIDRYL ALVKTMSMGR MRGVRWARLY SLVIWGCSLF LSLPMLVFRT bmy_13126T0/1-379 LMLVSIDRYL ALVKTMSMGR MRGVRWARLC SLVIWGCTLL LSLPMLVFRT BACU007712/1-360 LMLVSIDRYL ALVKTMSMGR MRGVRWARLY SLVIWGCTLL LSLPMLVFRT 201 250 ENSP00000307713/1-391 MKEYSDEGHN VTACVISYPS LIWEVFTNML LNVVGFLLPL SVITFCTMQI ENSBTAP00000028949/1-388 MQEYNAEGHN VTACVINYPS HSWEVFTNIL LNSVGFLLPL SVITFCTVQI ENSTTRP00000003302/1-392 MREYGAEGHN VTACIIIYPS RSWEVFTNSL LNSVGFLLPL SVITFCTVHI bmy_13126T0/1-379 MREYGAEGHN VTACIIIYPS RSWEVFTNIL LNSVGFLLPL SVITFCTVQI BACU007712/1-360 MREYGAEGHN VTACIIIYPS RSWEVFTNIL LNSVGFLLPF GVITFCTVQI 251 300 ENSP00000307713/1-391 MQVLRNNEMQ KFKEIQTERR ATVLVLVVLL LFIICWLPFQ ISTFLDTLHR ENSBTAP00000028949/1-388 MQVLRNNEMQ KFKEIQTERK ATLLVLAVLL LFVVCWLPFQ ISTFLDTLLR ENSTTRP00000003302/1-392 IRVLRNNEMQ KFKEIQTERK ATVLVLAVLL LFVVCWLPFQ LSTFLDTLQR bmy_13126T0/1-379 LRVLRNNEMQ KFKEIQTERK ATVLVLAVLL LFIVCWLPFQ ISTFLDTLQR BACU007712/1-360 LRVLRNNEMQ KFKEIQTERK ATVLVLAVLL LFIVCWLPFQ ISTFLDTLQR 301 350 ENSP00000307713/1-391 LGILSSCQDE RIIDVITQIA SFMAYSNSCL NPLVYVIVGK RFRKKSWEVY ENSBTAP00000028949/1-388 LHVLSGCWDE YVIDIFTQIA SFVAYSNSCL NPLVYVIVGK RFRKKSQEVY ENSTTRP00000003302/1-392 LGILSSCWDE HVVDVFTQIA SYVAYSNSCL NPLVYVIVGK SFRKKSREVY bmy_13126T0/1-379 LDVLSSCWDE HVIDVFTQIA SYVAYSNSCL NPLVYVIVGK SFRKKSREVY BACU007712/1-360 LDVLSSCWDE HVIDVFTQIA SYVAYSNSCL NPLVYVIVGK SFRKKSREVY 351 400 ENSP00000307713/1-391 QGVCQKGGCR S-EPIQMENS MGTLRTSISV ERQIHKLQDW AGSRQ ENSBTAP00000028949/1-388 ARLCRPGGCG SAEPSQTENS MGTLRTSISV ERNIHKLQ-- ----- ENSTTRP00000003302/1-392 GRLCRQGCCG A-EPSQTEAS MGTLRTSI-V ERQIHKLS-W VGSSQ bmy_13126T0/1-379 RRLCRQGGCG S-EPSQMENS MGTLRTSISV EQQIHKLS-- ----- BACU007712/1-360 GRLCRQAGCG S-EPSHMENS MGTLRTSISV ERQIHRLS-- -----