KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:20 2014 Check: 00 .. Name: ENSP00000362273/1-363 Len: 469 Check: 7420 Weight: 1.00 Name: ENSBTAP00000028950/1-365 Len: 469 Check: 2176 Weight: 1.00 Name: BACU009667/1-469 Len: 469 Check: 7245 Weight: 1.00 Name: ENSTTRP00000014309/1-365 Len: 469 Check: 1694 Weight: 1.00 Name: bmy_10788T0/1-284 Len: 469 Check: 8841 Weight: 1.00 // 1 50 ENSP00000362273/1-363 -------MAA AAMAAAAGGG AGAARSLSRF RGCLAGA--- ---------- ENSBTAP00000028950/1-365 ------MAAA AAMTAAGCGG AGAARSLSRF RGCLAGA--- ---------- BACU009667/1-469 MRAAGPPLVT RGAAATPGRG AALWGRGSRA VGCARAAPEV AVGPRGWRXX ENSTTRP00000014309/1-365 ------MAAA AVMTAAGCGG AGAARSLSRF RGCLAGA--- ---------- bmy_10788T0/1-284 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000362273/1-363 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028950/1-365 ---------- ---------- ---------- ---------- ---------- BACU009667/1-469 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSTTRP00000014309/1-365 ---------- ---------- ---------- ---------- ---------- bmy_10788T0/1-284 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000362273/1-363 ---------- ---------- ---------- -----LLGDC VGSFYEAHDT ENSBTAP00000028950/1-365 ---------- ---------- ---------- -----LLGDC VGAVYEARDT BACU009667/1-469 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXGDC VGAVYEARDT ENSTTRP00000014309/1-365 ---------- ---------- ---------- -----LLGDC VGAVYEARDT bmy_10788T0/1-284 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000362273/1-363 VDLTSVLRHV QSLEPDPGTP GSERTEALYY TDDTAMARAL VQSLLAKEAF ENSBTAP00000028950/1-365 VDLTSVLRQV QDLEPDPGSP GSARTEALCY TDDTAMARAL VQSLLAKEAF BACU009667/1-469 VDLTSVLRRV QDLEPDPGSP GSARPEALCY TDDTAMARAL VQSLLAKEAF ENSTTRP00000014309/1-365 VDLTSVLRRV QDLEPDPGSP GSTRTEALCY TDDTAMARAL VQSLLAKEAF bmy_10788T0/1-284 ---------- ---------- ---------- -----MARAL VQSLLAKEAF 201 250 ENSP00000362273/1-363 DEVDMAHRFA QEYKKDPDRG YGAGVVTVFK KLLNPKCRDV FEPARAQFNG ENSBTAP00000028950/1-365 DEVDMAHRFA QEYKKDPDRG YGAGVITVFR KLLSPRCRDV FEPARAQFNG BACU009667/1-469 DEMDMAHRFA QEYKKDPDRG YGAGVITVFR KLLSPKCRDV FEPARAQFNG ENSTTRP00000014309/1-365 DEMDMAHRFA QEYKKDPDRG YGAGVITVFR KLLSPKCRDV FEPARAQFNG bmy_10788T0/1-284 DEMDMAHRFA QEYKKDPDRG YGAGVITVFR KLLSPKCRDV FEPARAQFNG 251 300 ENSP00000362273/1-363 KGSYGNGGAM RVAGISLAYS SVQDVQKFAR LSAQLTHASS LGYNGAILQA ENSBTAP00000028950/1-365 KGSYGNGGAM RVAGISLAYS SVQDVQKFAR LSAQLTHASS LGYNGAILQA BACU009667/1-469 KGSYGNGGAM RVAGISLAYS SVQDVQKFAR LSAQLTHASS LGYNGAILQA ENSTTRP00000014309/1-365 KGSYGNGGAM RVAGISLAYS SVQDVQKFAR LSAQLTHASS LGYNGAILQA bmy_10788T0/1-284 KGSYGNGGAM RVAGISLAYS SVQDVQKFAR LSAQLTHASS LGYNGAILQA 301 350 ENSP00000362273/1-363 LAVHLALQGE SSSEHFLKQL LGHMEDLEGD AQSVLDAREL GMEERPYSSR ENSBTAP00000028950/1-365 LAVHLALQGE SSSEHFLEQL LGHMEELESD AQSVLDAREL GMEERPYSSR BACU009667/1-469 LAVHLALQGE SSSEHFLEQL LGHMEELESD AQSVSDAREL GMEERPYSSR ENSTTRP00000014309/1-365 LAVHLALQGE SSSEHFLEQL LGHMEELESD AQSVSDAREL GMEERPYSSR bmy_10788T0/1-284 LAVHLALQGE SSSEHFLEQL LGHMEELESD AQSVSDAREL GMEERPYSSR 351 400 ENSP00000362273/1-363 LKKIGELLDQ ASVTREEVVS ELGNGIAAFE SVPTAIYCFL RCMEPDPEIP ENSBTAP00000028950/1-365 LKKIGELLEQ DSVTREEVVS ELGNGIAAFE SVPTAIYCFL RCMEPDPEIP BACU009667/1-469 LKKIGELLEQ DSVTREEVVS ELGNGIAAFE SVPTAIYCFL RCMEPDPEIP ENSTTRP00000014309/1-365 LKKIGELLEQ DSVTREEVVS KLGNGIAAFE SVPTAIYCFL RCMEPDPEIP bmy_10788T0/1-284 LKKIGELLEQ DSVTREEVVS ELGNGIAAFE SVPTAIYCFL RCMEPDPEIP 401 450 ENSP00000362273/1-363 SAFNSLQRTL IYSISLGGDT DTIATMAGAI AGAYYGMDQV PESWQQSCEG ENSBTAP00000028950/1-365 STFNSLQRTL VYSISLGGDT DTIATMAGAI AGAYYGMEQV PESWQQSCEG BACU009667/1-469 SAFNSLQRTL VYSISLGGDT DTIATMAGAI AGAYYGMEQV PESWQQSCEG ENSTTRP00000014309/1-365 SAFNSLQRTL IYSISLGGDT DTIATMAGAI AGAYYGMEQV PESWQQSCEG bmy_10788T0/1-284 SAFNSLQRTL IYSISLGGDT DTIATMAGAI AGAYYGMEQV PESWQQSCEG 451 500 ENSP00000362273/1-363 YEETDILAQS LHRVFQKS- ENSBTAP00000028950/1-365 YEETDVLAQS LHRVFQKSL BACU009667/1-469 YEETDVLAQS LHRVFQKNL ENSTTRP00000014309/1-365 YEETDVLAQS LHRVFQKNL bmy_10788T0/1-284 YEETDVLAQS LHRVFQKNL