KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:21 2014 Check: 00 .. Name: ENSP00000246505/1-453 Len: 462 Check: 7133 Weight: 1.00 Name: ENSTTRP00000004181/1-433 Len: 462 Check: 7594 Weight: 1.00 Name: ENSBTAP00000028959/1-408 Len: 462 Check: 5435 Weight: 1.00 Name: bmy_15909T0/1-232 Len: 462 Check: 8664 Weight: 1.00 Name: BACU018902/1-431 Len: 462 Check: 7053 Weight: 1.00 // 1 50 ENSP00000246505/1-453 MAHITINQYL QQVYEAIDSR DGASCAELVS FKHPHVANPR LQMASPEEKC ENSTTRP00000004181/1-433 ---------- --VYEAIDTR DGSSLAELVS FKHPHVANPR LQMASPEEKC ENSBTAP00000028959/1-408 MAHITINQYL QQVCEAIDTR DGASLAELVS FKHPHVANPR LQMASPEEKC bmy_15909T0/1-232 ---------- ---------- ---------- ---------- ---------- BACU018902/1-431 ---------- --VCEAVDTR DGSSLAELVS FKHPHVANPR LQMASPEEKC 51 100 ENSP00000246505/1-453 QQVLEPPYDE MFAAHLRCTY AVGNHDFIEA YKCQTVIVQY PLSFMAAVPH ENSTTRP00000004181/1-433 QQVLEPPYDE MFAAHLRCTY AVGNHDFIEA YKCQTVIVQY LLSWV-LVQC ENSBTAP00000028959/1-408 QQVLEPPYDE MFAAHLRCTY AVGNHDFIEA YKCQTVIVQ- ---------- bmy_15909T0/1-232 ---------- ---------- ---------- ---------- ---------- BACU018902/1-431 QQVLEPPYDE MFAAHLRCTY AAGNHDFIEA YKCQTVIVQY LLS-V-TVQC 101 150 ENSP00000246505/1-453 RTHAVDYLGL ETRKHWASCS FLQLERNDSV LEQKLVSALS LGTSFLRAFQ ENSTTRP00000004181/1-433 LTGTAGYLGA KILKRQASLV PPLVRKQEKL T------ALP LSTSFLRAFQ ENSBTAP00000028959/1-408 ---------- ---------- ---------- ---------- ---SFLRAFQ bmy_15909T0/1-232 ---------- ---------- ---------- ---------- ---------- BACU018902/1-431 LTDTAGYLGA KILKHQALVT PFI--RKQEK L------ALP LSTSFLRAFQ 151 200 ENSP00000246505/1-453 AHKEENWALP VMYAVALDLR VFANNADQQL VKKGKSKVGD MLEKAAELLM ENSTTRP00000004181/1-433 AHKEENWALP VMYAVALDLR IFANNADQQL VKKGKSKVGD MLEKAAELLM ENSBTAP00000028959/1-408 AHKEENWALP VMYAVALDLR IFANNADQQL VKKGKSKVGD MLEKAAELLM bmy_15909T0/1-232 ---------- ---------- ---------- ---------- ---------- BACU018902/1-431 AHKEENWALP VMYAVALDLR IFANNADQQL VKKGKSKVGD MLEKAAELLM 201 250 ENSP00000246505/1-453 SCFRVCASDT RAGIEDSKKW GMLFLVNQLF KIYFKINKLH LCKPLIRAID ENSTTRP00000004181/1-433 SCFRVCASDT RAGIEDSKKW GMLFLVNQLF KIYFKINKLH LCKPLIRAID ENSBTAP00000028959/1-408 GCFRVCASDT RAGIEDSKKW GMLFLVNQLF KIYFKINKLH LCKPLIRAID bmy_15909T0/1-232 ---------- ---------- -MLFLVNQLF KIYFKINKLH LCKPLIRAID BACU018902/1-431 SCFRVCASDT RAGIEDSKKW GMLFLVNQLF KIYFKINKLH LCKPLIRAID 251 300 ENSP00000246505/1-453 SSNLKDDYST AQRVTYKYYV GRKAMFDSDF KQAEEYLSFA FEHCHRSSQK ENSTTRP00000004181/1-433 SSNLKDDYST AQRVTYRYYV GRKAMFDSDF KQAEEYLSFA FEHCHRLSQT ENSBTAP00000028959/1-408 SSNLKDDYST AQRVTYRYYV GRKAMFDSDF KQAEEYLSFA FEHCHRSSQK bmy_15909T0/1-232 SSNLKDDYST AQRVTYRYYV GRKAMFDSDF KQAEEYLSFA FEHCHRLSQK BACU018902/1-431 SSNLKDDYST AQRVTYRYYV GRKAMFDSDF KQAEEYLSFA FEHCHRLSQK 301 350 ENSP00000246505/1-453 NKRMILIYLL PVKMLLGHMP TVELLKKYHL MQFAEVTRAV SEGNLLLLHE ENSTTRP00000004181/1-433 NKRMVLIYLL PVKMLLGHMP TIELLRKYHL MQFAEVTKAV SEGNLLLLNE ENSBTAP00000028959/1-408 NKRMVLIYLL PVKMLLGHMP TIELLRKYHL MQFAEVTRAV SEGNLLLLNE bmy_15909T0/1-232 NKRMVLIYLL PVKMLLGHMP TIELLRKYHL MQFAEVTKAV SEGNLLLLNE BACU018902/1-431 NKRMVLIYLL PVKMLLGHMP TIELLRKYHL MQFAEVTKAV SEGNLLLLNE 351 400 ENSP00000246505/1-453 ALAKHEAFFI RCGIFLILEK LKIITYRNLF KKV------- --YLLLKTHQ ENSTTRP00000004181/1-433 VLANSDTFFF RCGIFLIL-K LNIITYRNLF RKV------- --YLLLKTHQ ENSBTAP00000028959/1-408 ALAAHETFFI RCGIFLILEK LKIITYRNLF KKVNSLSSAS SRYLLLKTHQ bmy_15909T0/1-232 ALAKHETFFI RCGIFLILEK LKIITYRNLF KKV------- --YLLLKTHQ BACU018902/1-431 ALAKHETFFI RCGIFLILEK LKIITYRNLF KKV------- --YLLLKTHQ 401 450 ENSP00000246505/1-453 LSLDAFLVAL KFMQVEDVDI DEVQCILANL IYMGHVKGYI SHQHQKLVVS ENSTTRP00000004181/1-433 LSLDAFLVAL KFMQVEDVDI AEVQCILANL IYMGHIKGYI SHQHQKLVVS ENSBTAP00000028959/1-408 LSLDAFLVAL KFMQVEDVDI AEVQCILANL IYMGHIKGYI SHQHQKLVVS bmy_15909T0/1-232 LSLDAFLVAL KFMQVEDVDI AEVQCILANL IYMGHIKGYI SHQHQKLVVS BACU018902/1-431 LSLDAFLVAL KFMQVEDVDI AEVQCILANL IYMGHIKGYI SHQHQKLVVS 451 500 ENSP00000246505/1-453 KQNPFPPLST VC ENSTTRP00000004181/1-433 KQNPFPPLST VC ENSBTAP00000028959/1-408 KQNPFPPLST VC bmy_15909T0/1-232 KQNPFPPLST VC BACU018902/1-431 KQNPFPPLST VC