KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:24 2014 Check: 00 .. Name: ENSTTRP00000013967/1-1008 Len: 1054 Check: 3910 Weight: 1.00 Name: ENSBTAP00000028964/1-1010 Len: 1054 Check: 9506 Weight: 1.00 Name: ENSP00000363216/1-1010 Len: 1054 Check: 144 Weight: 1.00 Name: bmy_04279T0/1-1054 Len: 1054 Check: 3332 Weight: 1.00 Name: BACU007599/1-1010 Len: 1054 Check: 1294 Weight: 1.00 // 1 50 ENSTTRP00000013967/1-1008 ---------- ---------- ---------- ---------- ----MSQLRL ENSBTAP00000028964/1-1010 ---------- ---------- ---------- ---------- ----MSQLRL ENSP00000363216/1-1010 ---------- ---------- ---------- ---------- ----MSQLRL bmy_04279T0/1-1054 MKTLACPLEV GSQVPMLGAN LLLVALRSPL SLAQGDRLPA LCLIMSHLRL BACU007599/1-1010 ---------- ---------- ---------- ---------- ----MSQLRL 51 100 ENSTTRP00000013967/1-1008 LPSRLGAQAS RLLAAHGVQR FSWYSRSSGP PVTFPSSKVG GGSSYMEEMY ENSBTAP00000028964/1-1010 LPSRLGTQAS RLLAPHGVQR FSWCSRSSGP PAPFASSRAG GGSSYMEEMY ENSP00000363216/1-1010 LPSRLGVQAA RLLAAHDVPV FGWRSRSSGP PATFPSSKGG GGSSYMEEMY bmy_04279T0/1-1054 LPSRLGTQAS RLLAAHGVQR FTWYSRSSGP PATFPSSKVG GGSSYMEEMY BACU007599/1-1010 LPSRLGAQAS RLLATHGVHR FSWYSRSSGP PATFPSSKVG GGSSYMEEMY 101 150 ENSTTRP00000013967/1-1008 FAWLENPQSV HKSWDSFFRK ASEEASYGPA QPRPLSVVPE SRPAVLSRTK ENSBTAP00000028964/1-1010 FAWLENPQSV HKSWDSFFRK ASEEASYSLA QPQPLSVVSE KRLAASSRTK ENSP00000363216/1-1010 FAWLENPQSV HKSWDSFFRE ASEEAFSGSA QPRPPSVVHE SRSAVSSRTK bmy_04279T0/1-1054 FAWLENPQSV HKSWDSFFRK ASEEASYGPA QPRPLSVVPE SRPAVLSRTK BACU007599/1-1010 FAWLENPQSV HKSWDSFFRK ASEEASYGPA QPRPLSVVPE SRPAVLSRTK 151 200 ENSTTRP00000013967/1-1008 TSKLVEDHLA VQSLIRAYQI RGHHVAQLDP LGILDADLDS FVPSDLITTI ENSBTAP00000028964/1-1010 TSKLVEDHLA VQSLIRAYQI RGHHVAQLDP LGILDADLDS FVPSDLITTV ENSP00000363216/1-1010 TSKLVEDHLA VQSLIRAYQI RGHHVAQLDP LGILDADLDS FVPSDLITTI bmy_04279T0/1-1054 TSKLVEDHLA VQSLIRAYQI RGHHVAQLDP LGILDADLDS FVPSDLITTI BACU007599/1-1010 TSKLVEDHLA VQSLIRAYQI RGHHVAQLDP LGILDADLDS FVPSDLITTI 201 250 ENSTTRP00000013967/1-1008 DKLAFYDLRE ADLDKEFQLP TTTFIGGSEN TLSLREIIRR LENTYCQHIG ENSBTAP00000028964/1-1010 DKLAFYDLQE ADLDKEFQLP TTTFIGGSEN TLSLREIIRR LESTYCQHIG ENSP00000363216/1-1010 DKLAFYDLQE ADLDKEFQLP TTTFIGGSEN TLSLREIIRR LENTYCQHIG bmy_04279T0/1-1054 DKLAFYDLRE ADLDKEFQLP TTTFIGGSEN TLSLREIIRR LENTYCQHIG BACU007599/1-1010 DKLAFYDLRE ADLDKEFQLP TTTFIGGSEN TLSLREIIRR LENTYCQHIG 251 300 ENSTTRP00000013967/1-1008 LEFMFINDVE QCQXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXFEDFLA ENSBTAP00000028964/1-1010 LEFMFINDVE QCQWIRQKFE SPGVMQFSSE EKRTLLARLV RSMRFEDFLA ENSP00000363216/1-1010 LEFMFINDVE QCQWIRQKFE TPGVMQFSSE EKRTLLARLV RSMRFEDFLA bmy_04279T0/1-1054 LEFMFINDVE QCQWIRQKFE TPGVMQFSSE EKRTLLARLV RSMRFEDFLA BACU007599/1-1010 LEFMFINDVE QCQWIRQKFE TPGVMQFSSE EKRTLLARLV RSMRFEDFLA 301 350 ENSTTRP00000013967/1-1008 RKWSSEKRFG LEGCEVMIPA LKTIIDKSSE MGIENVILGM PHRGRLNVLA ENSBTAP00000028964/1-1010 RKWSSEKRFG LEGCEVMIPA LKTIIDKSSE MGIENVILGM PHRGRLNVLA ENSP00000363216/1-1010 RKWSSEKRFG LEGCEVMIPA LKTIIDKSSE MGIENVILGM PHRGRLNVLA bmy_04279T0/1-1054 RKWSSEKRFG LEGCEVMIPA LKTIIDKSSE MGIENVILGM PHRGRLNVLA BACU007599/1-1010 RKWSSEKRFG LEGCEVMIPA LKTIIDKSSE MGIENVILGM PHRGRLNVLA 351 400 ENSTTRP00000013967/1-1008 NVIRKDLEQI FCQFDPKLEA ADEXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000028964/1-1010 NVIRKDLEQI FCQFDPKLEA ADEGSGDVKY HLGMYHERIN RVTNRNITLS ENSP00000363216/1-1010 NVIRKDLEQI FCQFDPKLEA ADEGSGDVKY HLGMYHERIN RVTNRNITLS bmy_04279T0/1-1054 NVIRKDLEQI FCQFDPKLEA ADEGSGDVKY HLGMYHERIN RVTNRNITLS BACU007599/1-1010 NVIRKDLEQI FCQFDPKLEA ADEGSGDVKY HLGMYHERIN RVTNRNITLS 401 450 ENSTTRP00000013967/1-1008 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000028964/1-1010 LVANPSHLEA VDPVVQGKTK AEQFYRGDAQ GKKVMSILVH GDAAFAGQGV ENSP00000363216/1-1010 LVANPSHLEA VDPVVQGKTK AEQFYRGDAQ GKKVMSILVH GDAAFAGQGV bmy_04279T0/1-1054 LVANPSHLEA VDPVVQGKTK AEQFYRGDAE GKKVMSILVH GDAAFAGQGV BACU007599/1-1010 LVANPSHLEA VDPVVQGKTK AEQFYRGDAQ GKKVMSILVH GDAAFAGQGV 451 500 ENSTTRP00000013967/1-1008 XXXXXXXXXX XXXXXXXXXX XXXXXXIGFT TDPRMARSSP YPTDVARVVN ENSBTAP00000028964/1-1010 VYETFHLSDL PSYTTNGTVH VVVNNQIGFT TDPRMARSSP YPTDVARVVN ENSP00000363216/1-1010 VYETFHLSDL PSYTTNGTVH VVVNNQIGFT TDPRMARSSP YPTDVARVVN bmy_04279T0/1-1054 VYETFHLSDL PSYTTNGTVH VVVNNQIGFT TDPRMARSSP YPTDVARVVN BACU007599/1-1010 VYETFHLSDL PSYTTNGTVH VVVNNQIGFT TDPRMARSSP YPTDVARVVN 501 550 ENSTTRP00000013967/1-1008 APIFHVNADD PEAVMYVCSV AAEWRNTFNK DVVVDLVCYR RRGHNEMDEP ENSBTAP00000028964/1-1010 APIFHVNADD PEAVIYVCSV AAEWRNTFNK DVVVDLVCYR RRGHNEMDEP ENSP00000363216/1-1010 APIFHVNADD PEAVIYVCSV AAEWRNTFNK DVVVDLVCYR RRGHNEMDEP bmy_04279T0/1-1054 APIFHVNADD PEAVIYVCSV AAEWRNTFNK DVVVDLVCYR RRGHNEMDEP BACU007599/1-1010 APIFHVNADD PEAVIYVCSV AAEWRNTFNK DVVVDLVCYR RRGHNEMDEP 551 600 ENSTTRP00000013967/1-1008 MFTQPLMYKQ IHRQVPVLKK YADKLIAEGT VTLQEFEEEI AKYDRICEEA ENSBTAP00000028964/1-1010 MFTQPLMYKQ IHRQVPVLKK YADKLIAEGT VTLQEFEEEI AKYDRICEEA ENSP00000363216/1-1010 MFTQPLMYKQ IHRQVPVLKK YADKLIAEGT VTLQEFEEEI AKYDRICEEA bmy_04279T0/1-1054 MFTQPLMYKQ IHRQVPVLKK YADKLIAEGA VTLQEFEEEI AKYDRICEEA BACU007599/1-1010 MFTQPLMYKQ IHRQVPVLKK YADKLIAEGA VTLQEFEEEI AKYDRICEEA 601 650 ENSTTRP00000013967/1-1008 FGRSKDKKIL HIKHWLDSPW PGFFTVD-EP KSMTCSATGI PEDMLTHIVE ENSBTAP00000028964/1-1010 YGKSKDKKIL HIKHWLDSPW PGFFNMDGEP KSMTCPATGV PEDTLTHIGE ENSP00000363216/1-1010 YGRSKDKKIL HIKHWLDSPW PGFFNVDGEP KSMTCPATGI PEDMLTHIGS bmy_04279T0/1-1054 FGRSKDKKIL HIKHWLDSPW PGFFTVDGEP KSMTCPATGI PEDMLTHIGE BACU007599/1-1010 FGRSKDKKIL HIKHWLDSPW PGFFTVDGEP KSMTCPATGI PEDMLTHIGE 651 700 ENSTTRP00000013967/1-1008 VASSVPLEDF -IHTGLSRIL RGRADMTRKR TVDWALAEYM AFGSLLKEGI ENSBTAP00000028964/1-1010 VASSVPLEDF KIHVGLSRIL RGRADMTRKR TVDWALAEYM AFGSLLKEGI ENSP00000363216/1-1010 VASSVPLEDF KIHTGLSRIL RGRADMTKNR TVDWALAEYM AFGSLLKEGI bmy_04279T0/1-1054 VASSVPLEDF KIHTGLSRIL RGRADMTRKR TVDWALAEYM AFGSLLKEGI BACU007599/1-1010 VASSVPLEDF KIHTGLSRIL RGRADMTRKR TVDWALAEYM AFGSLLKEGI 701 750 ENSTTRP00000013967/1-1008 HVRLSGQDVE RGTFSHRHHV LHDQEVDRRT CVPMNHLWPH QAPYTVCNSS ENSBTAP00000028964/1-1010 HVRLSGQDVE RGTFSHRHHV LHDQDIDRRT CVPMNHLWPD QAPYTVCNSS ENSP00000363216/1-1010 HVRLSGQDVE RGTFSHRHHV LHDQEVDRRT CVPMNHLWPD QAPYTVCNSS bmy_04279T0/1-1054 HVRLSGQDVE RGTFSHRHHV LHDQEVDRRT CVPMNHLWPD QAPYTVCNSS BACU007599/1-1010 HVRLSGQDVE RGTFSHRHHV LHDQEVDRRT CVPMNHLWPD QAPYTVCNSS 751 800 ENSTTRP00000013967/1-1008 LSEYGVLGFE LGYAMASPNA LVLWEAQFGD FHNTAQCIID QFISTGQAKW ENSBTAP00000028964/1-1010 LSEYGVLGFE LGYAMASPNA LVLWEAQFGD FHNTAQCIID QFISTGQAKW ENSP00000363216/1-1010 LSEYGVLGFE LGYAMASPNA LVLWEAQFGD FHNTAQCIID QFISTGQAKW bmy_04279T0/1-1054 LSEYGVLGFE LGYAMASPNA LVLWEAQFGD FHNTAQCIID QFISTGQAKW BACU007599/1-1010 LSEYGVLGFE LGYAMASPNA LVLWEAQFGD FHNTAQCIID QFISTGQAKW 801 850 ENSTTRP00000013967/1-1008 VRHNGVVLLL PHGMEGMGPE HSSARPERFL QMSNDDSDAY PAFTQDFEVR ENSBTAP00000028964/1-1010 VRHNGIVLLL PHGMEGMGPE HSSARPERFL QMSNDDSDAY PAFTQDFEVR ENSP00000363216/1-1010 VRHNGIVLLL PHGMEGMGPE HSSARPERFL QMSNDDSDAY PAFTKDFEVS bmy_04279T0/1-1054 VRHNGVVLLL PHGMEGMGPE HSSARPERFL QMSNDDSDAY PAFTQDFEVR BACU007599/1-1010 VRHNGVVLLL PHGMEGMGPE HSSARPERFL QMSNDDSDAY PAFTQDFEVR 851 900 ENSTTRP00000013967/1-1008 QLYDCNWIVV NCSTPASYFH VLRRQILLPF RKPLIIFTPK SLLRHPEAKS ENSBTAP00000028964/1-1010 QLYDCNWIVV NCSTPASYFH VLRRQILLPF RKPLIIFTPK SLLRHPEAKS ENSP00000363216/1-1010 QLYDCNWIVV NCSTPANYFH VLRRQILLPF RKPLIIFTPK SLLRHPEAKS bmy_04279T0/1-1054 QLYDCNWIVV NCSTPASYFH VLRRQILLPF RKPLIIFTPK SLLRHPEAKS BACU007599/1-1010 QLYDCNWIVV NCSTPASYFH VLRRQILLPF RKPLIIFTPK SLLRHPEAKS 901 950 ENSTTRP00000013967/1-1008 SFDQMVSGTS FQRVIPEDGA AAQAPGQVRR LIFCTGKVYY DLVKERSSQG ENSBTAP00000028964/1-1010 SFDQMVSGTS FQRVIPEDGA AARAPGQVRR LIFCTGKVFY DLVKERSSQG ENSP00000363216/1-1010 SFDQMVSGTS FQRVIPEDGA AARAPEQVQR LIFCTGKVYY DLVKERSSQD bmy_04279T0/1-1054 SFDQMVSGTS FQRVIPEDGA AAQAPGQVRR LIFCTGKVYY DLVKERSSQG BACU007599/1-1010 SFDQMVSGTS FQRVIPEDGA AAQAPGQVRR LIFCTGKVYY DLVKERSSQG 951 1000 ENSTTRP00000013967/1-1008 LDEQVAITRL EQISPFPFDL IRREAEKYPG AELVWCQEEH KNMGYYDYIS ENSBTAP00000028964/1-1010 LDELVAITRL EQISPFPFDL IQREAEKYPG VQLVWCQEEH KNMGYYDYIS ENSP00000363216/1-1010 LEEKVAITRL EQISPFPFDL IKQEAEKYPG AELAWCQEEH KNMGYYDYIS bmy_04279T0/1-1054 LDQHVAITRL EQISPFPFDL IKREAEKYPG AELVWCQEEH KNMGYYDYIS BACU007599/1-1010 LDQHVAITRL EQISPFPFDL IKREAEKYPG AELVWCQEEH KNMGYYDYIS 1001 1050 ENSTTRP00000013967/1-1008 PRFMTILGRA RPIWYVGRDP AAAPATGNRN THLVSLKKFL DTAFNLQAFE ENSBTAP00000028964/1-1010 PRFRAVLGRA RPVWYVGRDP AAAPATGNRN THLVSLKKFL DTAFNLQAFE ENSP00000363216/1-1010 PRFMTILRRA RPIWYVGRDP AAAPATGNRN THLVSLKKFL DTAFNLQAFE bmy_04279T0/1-1054 PRFMTILGRA RPIWYVGRDP AAAPATGNRN THLVSLKKFL DTAFNLQAFE BACU007599/1-1010 PRFMTILGRA RPIWYVGRDP AAAPATGNRN THLVSLKKFL DTAFNLQAFE 1051 1100 ENSTTRP00000013967/1-1008 GKTF ENSBTAP00000028964/1-1010 GKTF ENSP00000363216/1-1010 GKTF bmy_04279T0/1-1054 GKTF BACU007599/1-1010 GKTF