KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:37:24 2014 Check: 00 .. Name: ENSBTAP00000028965/1-275 Len: 755 Check: 5218 Weight: 1.00 Name: ENSP00000437121/1-750 Len: 755 Check: 2807 Weight: 1.00 Name: bmy_08960T0/1-283 Len: 755 Check: 4203 Weight: 1.00 Name: ENSTTRP00000008390/1-279 Len: 755 Check: 295 Weight: 1.00 // 1 50 ENSBTAP00000028965/1-275 ---------- ---------- ---------- ---------- ---------- ENSP00000437121/1-750 MLFFAGETGL PLFPRFALSV EGAEPTDHGH PQAVSKGHNR CALTIDELAQ bmy_08960T0/1-283 ---------- ---------- ---DPGDEAQ ITSEERGSK- ---------- ENSTTRP00000008390/1-279 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000028965/1-275 ---------- ---------- ---------- ---------- ---------- ENSP00000437121/1-750 DVEACFQQLS TLQPGSRGWQ CSASACRGEN WSFAQKWHSG WERAHSQQVW bmy_08960T0/1-283 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008390/1-279 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000028965/1-275 ---------- ---------- ---------- ---------- ---------- ENSP00000437121/1-750 GNWGICSNEE AKSKESGEGD KPGKTTALGT SEVPGNPGTL PHWDEASPNP bmy_08960T0/1-283 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008390/1-279 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000028965/1-275 ---------- ---------- ---------- ---------- ---------- ENSP00000437121/1-750 PQGPAEPWGA LERVRSRFHQ LISGLKKQRS QILHDNTKLH GDQERFHERV bmy_08960T0/1-283 ---------- ---------- ---------- -----GTKLP RKAKLFCKSW ENSTTRP00000008390/1-279 ---------- ---------- ---------- ---------- ---------- 201 250 ENSBTAP00000028965/1-275 ---------- --------Q- ---------- ---------- ---------- ENSP00000437121/1-750 CALERERERE VTKISRLERD NHRLVGDISQ LKKELDQYLQ AISDLEDCNG bmy_08960T0/1-283 SWILRNHSER PSVFDRAQP- ---------- ---------- ---------- ENSTTRP00000008390/1-279 ---------- --------R- ---------- ---------- ---------- 251 300 ENSBTAP00000028965/1-275 ---------- ---------- ---------- ---------- ---------- ENSP00000437121/1-750 KSYCKILELE EENETLKGNL GQLQKATSES VRKSKDTMEQ VTLENWKLQT bmy_08960T0/1-283 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008390/1-279 ---------- ---------- ---------- ---------- ---------- 301 350 ENSBTAP00000028965/1-275 ---------- ---------- ---------- ---------- ---------- ENSP00000437121/1-750 LISELGVSYK ELIKDIVLGI EDMIRALSGE NEHLLRRVHV LEREVTLQRS bmy_08960T0/1-283 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008390/1-279 ---------- ---------- ---------- ---------- ---------- 351 400 ENSBTAP00000028965/1-275 ---------- ---------- ---------- ---------- ---------- ENSP00000437121/1-750 TDQGRLVRGR EHLQGKAKMH ALDKEVQVTP LTGQLLSRAC GPPLEEEMSL bmy_08960T0/1-283 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008390/1-279 ---------- ---------- ---------- ---------- ---------- 401 450 ENSBTAP00000028965/1-275 ---------- ---------- ---------- ---------- ---------- ENSP00000437121/1-750 AAGQTGPSTG TGNSRRGADS PPPSLVWRNT GVANALQGNV SGAEVKEAHL bmy_08960T0/1-283 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008390/1-279 ---------- ---------- ---------- ---------- ---------- 451 500 ENSBTAP00000028965/1-275 ---------- ---------- -----LQDRE ASASEEDLRL HIRRLHHQVL ENSP00000437121/1-750 EKEEKRPRCS VAQGQALSSL SNGPMLRDSE AEVTEEDPRL RAQQLHHRVL bmy_08960T0/1-283 ---------- ---------- -----LQDPE AEASKEDLRL CVRQLHHQVL ENSTTRP00000008390/1-279 ---------- ---------- -----LQDPE AEASKEDLRL CVRQLRHQVL 501 550 ENSBTAP00000028965/1-275 TLQRQLRDQW SAHRELQSSL EEAEHLKGKI QEKLDELQKK HHEVNLAVTP ENSP00000437121/1-750 TLQCQLRDQG AAH---QASL DEATRLQEEL QAKLEELQKK QHEAKLAVTP bmy_08960T0/1-283 TLQCQLRDQG SAHQELQASR DEAARLRCEL KDKVDALQKK HHEANLAVTP ENSTTRP00000008390/1-279 TLQCQLRDQG SAHQELQASR DEAARLRCEL KDKLDALQKK HQEANLAVTP 551 600 ENSBTAP00000028965/1-275 LKELVHACCI KTVASRHFLR TH--SQIRHY GL--IGFNTL IEDVVWNDVA ENSP00000437121/1-750 LKAKI-ASLV RKCRERNRLI THLLQELHRH GLGNLLLSEL AQNML-NDVA bmy_08960T0/1-283 LKAKL-ASLV QKCRERNHLI THLLQELHRH GVENHRLSET ASNMV-NDMA ENSTTRP00000008390/1-279 LKAKL-ASLV QKCRERNHLI THLLQELHRH GVENHQLSET ASNMV-NDAA 601 650 ENSBTAP00000028965/1-275 LAEYAATFLA PRVPETSHHL DVESEMTAFV RVQKCLLNPQ MDSVLQRPLH ENSP00000437121/1-750 LAEYTATFLA PGVPETSHHL DVKSEMTAAL RAQTYLLNPE MDSVLQSSLS bmy_08960T0/1-283 LAEYAATFLA PGVPQTSHHL DVESEKTAV- ---------- ---------- ENSTTRP00000008390/1-279 LAEYAATFLA PGVPQTSHHL DVESEKTTVV RAQKYLLNPE MDSVLQRPLH 651 700 ENSBTAP00000028965/1-275 SETWPIPEAE WPAWTAELDS LKLPLPSGLM ADPEICQASV TMEPGLPVQC ENSP00000437121/1-750 SESWPIPEPE WPAQTAQLDS LKLPLSLVST LDPGTCLAAV TVEPGLPAQR bmy_08960T0/1-283 ---------- ---------- --LPWPSGLT PDPGMCQASI AVEPGLPVQR ENSTTRP00000008390/1-279 SESWPIPEAE WPAQTAQLGS LKLPWPSGPT PDPGMCQASI AVEPGLPVQR 701 750 ENSBTAP00000028965/1-275 LQEKGGTSCP GLQSDDLLPS PELLSPARIL ALHQELRRSF SSTSQVNKSP ENSP00000437121/1-750 LQEKGGMPCP ALQVDNVPAP SELLSPARIL AFHQELRQSI CSNSQVHKSP bmy_08960T0/1-283 LQEKGGMSCP GLQAEHLLPS PELLSPARIL ALHQELRQSI CSTSLVNKSP ENSTTRP00000008390/1-279 LQEKGGMSWP GLQAEHLLPS PELLSPARIL ALHQELRQSI CSTSQVNKSP 751 800 ENSBTAP00000028965/1-275 LEL-- ENSP00000437121/1-750 LELEM bmy_08960T0/1-283 LDL-- ENSTTRP00000008390/1-279 LELME