KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:26 2014 Check: 00 .. Name: ENSTTRP00000013424/1-433 Len: 909 Check: 493 Weight: 1.00 Name: BACU008961/1-852 Len: 909 Check: 5239 Weight: 1.00 Name: ENSP00000298852/1-439 Len: 909 Check: 7848 Weight: 1.00 Name: bmy_04131T0/1-464 Len: 909 Check: 5423 Weight: 1.00 Name: ENSBTAP00000028983/1-456 Len: 909 Check: 1594 Weight: 1.00 // 1 50 ENSTTRP00000013424/1-433 ---------- ---------- ---------- ---------- ---------- BACU008961/1-852 MGQDQTKQQI AKGLQLYQSN QTEKALQVWT KVLEKSSDLV GRFRVLGCLV ENSP00000298852/1-439 ---------- ---------- ---------- ---------- ---------- bmy_04131T0/1-464 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028983/1-456 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000013424/1-433 ---------- ---------- ---------- ---------- ---------- BACU008961/1-852 TAHSEMGRYK EMLKFAVVQI DTARELEDAD FLLESYLNLA RSNEKLCEFH ENSP00000298852/1-439 ---------- ---------- ---------- ---------- ---------- bmy_04131T0/1-464 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028983/1-456 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000013424/1-433 ---------- ---------- ---------- ---------- ---------- BACU008961/1-852 KTISYCKTCL GLPGTRAATQ LGGQVSLSMG NAFLGLSLFQ KALESFEKAL ENSP00000298852/1-439 ---------- ---------- ---------- ---------- ---------- bmy_04131T0/1-464 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028983/1-456 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000013424/1-433 ---------- ---------- ---------- ---------- ---------- BACU008961/1-852 RYAHNNDDTM LECRVCCSLG SFYAQVKDYE KALFFPCKAA ELVNDYGKGW ENSP00000298852/1-439 ---------- ---------- ---------- ---------- ---------- bmy_04131T0/1-464 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028983/1-456 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000013424/1-433 ---------- ---------- ---------- ---------- ---------- BACU008961/1-852 SLKYRAMSQY HMAVAYRLLG HLGSAMECCE ESMKIALQHG DRPLQALCLL ENSP00000298852/1-439 ---------- ---------- ---------- ---------- ---------- bmy_04131T0/1-464 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028983/1-456 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000013424/1-433 ---------- ---------- ---------- ---------- ---------- BACU008961/1-852 CFADIHRSRG DLETAFPRYD SAMSIMTEIG NRLGQVQVLL GVAKCWVARK ENSP00000298852/1-439 ---------- ---------- ---------- ---------- ---------- bmy_04131T0/1-464 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028983/1-456 ---------- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000013424/1-433 ---------- ---------- ---------- ---------- ---------- BACU008961/1-852 ALDKALDAIE RAQDLAEEVG NKVRTESVCW VWSQEPKLGQ LKLHCLSESI ENSP00000298852/1-439 ---------- ---------- ---------- ---------- ---------- bmy_04131T0/1-464 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028983/1-456 ---------- ---------- ---------- ---------- ---------- 351 400 ENSTTRP00000013424/1-433 ---------- ---------- ---------- ---------- ---------- BACU008961/1-852 YRSRGLQREL RAHVVRFHEC VEETELYCGL CGESIGEKNS RLQALPCSHI ENSP00000298852/1-439 ---------- ---------- ---------- ---------- ---------- bmy_04131T0/1-464 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028983/1-456 ---------- ---------- ---------- ---------- ---------- 401 450 ENSTTRP00000013424/1-433 ---------- ---VNLLPKL ESPVTRQEKM ATVWDEAEQD GIGEEVLKMS BACU008961/1-852 FHLSLIFGLL LQEVNLLPKL ENPVTRQEKM ATVWDEAEQD GIGEEVLKMS ENSP00000298852/1-439 ---------- ---MNLLPNI ESPVTRQEKM ATVWDEAEQD GIGEEVLKMS bmy_04131T0/1-464 ---------- ---------- ---------M ATVWDEAEQD GIGEEVLKMS ENSBTAP00000028983/1-456 ---------- --MVNLLPKL ESPVTRQEKM ATVWDEAEQD GIGEEVLKMS 451 500 ENSTTRP00000013424/1-433 TEEIIQRTRL LDSEIKIMKS EVLRVTHELQ AMKDKIKENS EKIKVNKTLP BACU008961/1-852 TEEIIQRTRL LDSEIKIMKS EVLRVTHELQ AMKDKIKENS EKIKVNKTLP ENSP00000298852/1-439 TEEIIQRTRL LDSEIKIMKS EVLRVTHELQ AMKDKIKENS EKIKVNKTLP bmy_04131T0/1-464 TEEIIQRTRL LDSEIKIMKS EVLRVTHELQ AMKDKIKENS EKIKVNKTLP ENSBTAP00000028983/1-456 TEEIIQRTRL LDSEIKIMKS EVLRVTHELQ AMKDKIKENS EKIKVNKTLP 501 550 ENSTTRP00000013424/1-433 YLVSNVIELL DVDPNDQEED GANIDLDSQR KGKCAVIKTS TRQTYFLPVI BACU008961/1-852 YLVSNVIELL DVDPNDQEED GANIDLDSQR KGKCAVIKTS TRQTYFLPVI ENSP00000298852/1-439 YLVSNVIELL DVDPNDQEED GANIDLDSQR KGKCAVIKTS TRQTYFLPVI bmy_04131T0/1-464 YLVSNVIELL DVDPNDQEED GANIDLDSQR KGKCAVIKTS TRQTYFLPVI ENSBTAP00000028983/1-456 YLVSNVIELL DVDPNDQEED GANIDLDSQR KGKCAVIKTS TRQTYFLPVI 551 600 ENSTTRP00000013424/1-433 GLVDAEKLKP GDLVGVNKDS YLILETLPTE YDSRVKAMEV DERPTEQYSD BACU008961/1-852 GLVDAEKLKP GDLVGVNKDS YLILETLPTE YDSRVKAMEV DERPTEQYSD ENSP00000298852/1-439 GLVDAEKLKP GDLVGVNKDS YLILETLPTE YDSRVKAMEV DERPTEQYSD bmy_04131T0/1-464 GLVDAEKLKP GDLVGVNKDS YLILETLPTE YDSRVKAMEV DERPTEQYSD ENSBTAP00000028983/1-456 GLVDAEKLKP GDLVGVNKDS YLILETLPTE YDSRVKAMEV DERPTEQYSD 601 650 ENSTTRP00000013424/1-433 IGGLDKQIQE ---------- ------LVEA IVLPMNHKEK FENLGIQPPK BACU008961/1-852 IGGLDKQIQE ---------- ------LVEA IVLPMNHKEK FENLGIQPPK ENSP00000298852/1-439 IGGLDKQIQE ---------- ------LVEA IVLPMNHKEK FENLGIQPPK bmy_04131T0/1-464 IGGLDKQIQE ---------- ------LVEA IVLPMNHKEK FENLGIQPPK ENSBTAP00000028983/1-456 IGGLDKQIQE VREARHLTSL LCLSASLVEA IVLPMNHKEK FENLGIQPPK 651 700 ENSTTRP00000013424/1-433 GVLMYGPPG- GKTLLARACA AQTA------ ---------- ---------- BACU008961/1-852 GVLMYGPPGT GKTLLARACA AQTK------ ---------- ---------- ENSP00000298852/1-439 GVLMYGPPGT GKTLLARACA AQTK------ ---------- ---------- bmy_04131T0/1-464 GVLMYGPPGT GKTLLARACA AQTKVSALGG MRRRWAGAKA LPMGSNRRGF ENSBTAP00000028983/1-456 GVLMYGPPGT GKTLLARACA AQTK------ ---------- ---------- 701 750 ENSTTRP00000013424/1-433 ---------- --------TQ KLCPQLVQM- IGDGAKLVRD AF-LAKEKAP BACU008961/1-852 ---------- -----ATFLK LAGPQLVQMF IGDGAKLVRD AFALAKEKAP ENSP00000298852/1-439 ---------- -----ATFLK LAGPQLVQMF IGDGAKLVRD AFALAKEKAP bmy_04131T0/1-464 SSCLWPDLST PPPPQATFLK LAGPQLVQMF IGDGAKLVRD AFALAKEKAP ENSBTAP00000028983/1-456 ---------- -----ATFLK LAGPQLVQMF IGDGAKLVRD AFALAKEKAP 751 800 ENSTTRP00000013424/1-433 SIIFIDELDA IGTKRFDSEK AGDREVQRTM LELLNQLDGF QPNTQVKVIA BACU008961/1-852 SIIFIDELDA IGTKRFDSEK AGDREVQRTM LELLNQLDGF QPNTQVKVIA ENSP00000298852/1-439 SIIFIDELDA IGTKRFDSEK AGDREVQRTM LELLNQLDGF QPNTQVKVIA bmy_04131T0/1-464 SIIFIDELDA IGTKRFDSEK AGDREVQRTM LELLNQLDGF QPNTQVKVIA ENSBTAP00000028983/1-456 SIIFIDELDA IGTKRFDSEK AGDREVQRTM LELLNQLDGF QPNTQVKVIA 801 850 ENSTTRP00000013424/1-433 ATNRVDILDP ALLRSGRLDR KIEFPMPNEE ARARIMQIHS RKMNVSPDVN BACU008961/1-852 ATNRVDILDP ALLRSGRLDR KIEFPMPNEE ARARIMQIHS RKMNVSPDVN ENSP00000298852/1-439 ATNRVDILDP ALLRSGRLDR KIEFPMPNEE ARARIMQIHS RKMNVSPDVN bmy_04131T0/1-464 ATNRVDILDP ALLRSGRLDR KIEFPMPNEE ARARIMQIHS RKMNVSPDVN ENSBTAP00000028983/1-456 ATNRVDILDP ALLRSGRLDR KIEFPMPNEE ARARIMQIHS RKMNVSPDVN 851 900 ENSTTRP00000013424/1-433 YEELARCTDD FNGAQCKAVC VEAGMIALRR GATELTHEDY MEGILEVQAK BACU008961/1-852 YEELARCTDD FNGAQCKAVC VEAGMIALRR GATELTHEDY MEGILEVQAK ENSP00000298852/1-439 YEELARCTDD FNGAQCKAVC VEAGMIALRR GATELTHEDY MEGILEVQAK bmy_04131T0/1-464 YEELARCTDD FNGAQCKAVC VEAGMIALRR GATELTHEDY MEGILEVQAK ENSBTAP00000028983/1-456 YEELARCTDD FNGAQCKAVC VEAGMIALRR GATELTHEDY MEGILEVQAK 901 950 ENSTTRP00000013424/1-433 KKANLQYYA BACU008961/1-852 KKANLQYYA ENSP00000298852/1-439 KKANLQYYA bmy_04131T0/1-464 KKANLQYYA ENSBTAP00000028983/1-456 KKANLQYYA