KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:27 2014 Check: 00 .. Name: BACU006680/1-116 Len: 741 Check: 3881 Weight: 1.00 Name: ENSTTRP00000001937/1-736 Len: 741 Check: 6399 Weight: 1.00 Name: bmy_05705T0/1-518 Len: 741 Check: 7122 Weight: 1.00 Name: ENSP00000365630/1-740 Len: 741 Check: 9245 Weight: 1.00 Name: ENSBTAP00000028993/1-740 Len: 741 Check: 229 Weight: 1.00 // 1 50 BACU006680/1-116 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001937/1-736 MEPDGDLEEL ARLRSVFAAC DANRSGRLER EEFSALCAEL RVRPADAEAV bmy_05705T0/1-518 ---------- ---------- ---------- ---------- ---------- ENSP00000365630/1-740 MEADGDGEEL ARLRSVFAAC DANRSGRLER EEFRALCTEL RVRPADAEAV ENSBTAP00000028993/1-740 MEADGDLEEL ARLRSVFAAC DANRSGRLER EEFRALCAEL RVRPADAEAV 51 100 BACU006680/1-116 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001937/1-736 FQRLDADRDG SITFQEFARG FRGAHRGRRR WGRGPREPAF TAALVGSDPG bmy_05705T0/1-518 ---------- ---------- ---------- ---------- ---------- ENSP00000365630/1-740 FQRLDADRDG AITFQEFARG FLGSLRGGRR RDWGPLDPAP AVSEAGPETH ENSBTAP00000028993/1-740 FQRLDADRDG AITFQEFARG FRGARRVGPR RGWGPREPAP AAAQVGSDSG 101 150 BACU006680/1-116 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001937/1-736 DSQEDEGDED AAAALAAHWD SASPGQAWQD FQARLGDEVK FIPRKEQVST bmy_05705T0/1-518 ---------- ---------- ---------- ---------N FFGRKEQVST ENSP00000365630/1-740 DSEEDEGDED AAAALATSCG PASPGRAWQD FQARLGDEAK FIPREEQVST ENSBTAP00000028993/1-740 SGEEDEGDED AAAALAAPWD PASSGQAWQD FQARLGDEVK FIPRKEQVST 151 200 BACU006680/1-116 ---------- ---------- ---------- ---MENLAIA VKR------- ENSTTRP00000001937/1-736 LYQNINLVEP RLIQPYEHVI KNFIREIKLQ STEMENLAIA VKRAQDKAAM bmy_05705T0/1-518 LYQNINLVEP RLIQPYEHVI KNFIREIKLQ STEMENLAIA VKRAQDKAAM ENSP00000365630/1-740 LYQNINLVEP RLIQPYEHVI KNFIREIRLQ STEMENLAIA VKRAQDKAAM ENSBTAP00000028993/1-740 LYQNINLVEP RLIQPYEHVI KNFIREIKLQ STEMENLAIA VKRAQDKAAM 201 250 BACU006680/1-116 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001937/1-736 QLSELEEEMD QRIQAAEHKT RKDEKRKAEE ALSDLRRQYE TDVGDLQVTI bmy_05705T0/1-518 QLSELEEEMD QRIQAAEHKT RKDEKRKAEE ALSDLRRQYE TEVGDLQVTI ENSP00000365630/1-740 QLSELEEEMD QRIQAAEHKT RKDEKRKAEE ALSDLRRQYE TEVGDLQVTI ENSBTAP00000028993/1-740 QLSELEEEMD QRIQAAEHKT RKDEKRKAEE ALSDLRRQYE TEVGDLQVTI 251 300 BACU006680/1-116 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001937/1-736 KKLKKLEEQS KHISQKEDVA ALKKQIYDLS MENQKVKKDL LEAQTNIAFL bmy_05705T0/1-518 KKLKKLEEQS KHISQKEDVA ALKKQIYDLS MENQKVKKDL LEAQTNIAFL ENSP00000365630/1-740 KKLRKLEEQS KRVSQKEDVA ALKKQIYDLS MENQKVKKDL LEAQTNIAFL ENSBTAP00000028993/1-740 KKLKKLEEQS KHISQKQDVA ALKKQIYDLS MENQKVKKDL LEAQTNIAFL 301 350 BACU006680/1-116 ---------- ---------- DLEIIREYTE DRNSLERQIE ILQF------ ENSTTRP00000001937/1-736 QSELDSLKSD YADQSLNSEX XXXXXXXXXX XXXXXXXXXX XXXTANRKLH bmy_05705T0/1-518 QSELDSLKSD YADQSLNSER DLEIIREYTE DRNSLERQIE ILQTANRKLH ENSP00000365630/1-740 QSELDALKSD YADQSLNTER DLEIIRAYTE DRNSLERQIE ILQTANRKLH ENSBTAP00000028993/1-740 QSELDSLKSD YADQSLNSER DLEIIREYTE DRNSLERQIE ILQTANRKLH 351 400 BACU006680/1-116 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001937/1-736 DSNDGLRSAL ENSYSKFNRS LRINNISPGN TISRSSPKFN AHSPQPLGYD bmy_05705T0/1-518 DSNDGLRSAL ENSYSKFNRS LRINNISPGN TISRSSPKFN AHSPQPLGYD ENSP00000365630/1-740 DSNDGLRSAL ENSYSKFNRS LHINNISPGN TISRSSPKFI GHSPQPLGYD ENSBTAP00000028993/1-740 DSNDGLRSAL ENSCSKLSRA LRINNISPGN TVSRSSPKFN LHSPQPLGYD 401 450 BACU006680/1-116 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001937/1-736 RSSRSSYMDE DCDSLALCDP MQRINCDIDS LPESCFDSGL STLRDFNEYD bmy_05705T0/1-518 RSSRSSYMDE DCDSLALCDP VQRINCDIDS LPESCFDSGL STLRDSNEYD ENSP00000365630/1-740 RSSRSSYVDE DCDSLALCDP LQRTNCEVDS LPESCFDSGL STLRDPNEYD ENSBTAP00000028993/1-740 RSSRSSYMDE DCDSLALCDP MQRMNCDVDS LPESCFDSGL STLRDSNEYD 451 500 BACU006680/1-116 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001937/1-736 SEVEYKHQRG FQRSHGTQES SGGDASDTDV PDIRDEETYG SEGVASILDW bmy_05705T0/1-518 SEVEYKHQRG FQRSHGTQES SGGDASDTDV PDIRDEETYG SEGVASILDW ENSP00000365630/1-740 SEVEYKHQRG FQRSHGVQES FGGDASDTDV PDIRDEETFG LEDVASVLDW ENSBTAP00000028993/1-740 SEVEYKHQRG FQRSHGMQES FGGDASDTDV PDIRDEETYG SEGVASILDW 501 550 BACU006680/1-116 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001937/1-736 KPQESASEGS VISSLRKPIS ALAPQTDMVD DNHNSSSSQK AYKIVLAGDA bmy_05705T0/1-518 KPQGSASEGS GISSLRKPIS ALAPQTDMVD ENHKSSSSQK AYKIVLAGDA ENSP00000365630/1-740 KPQGSVSEGS IVSSSRKPIS ALSPQTDLVD DNAKSFSSQK AYKIVLAGDA ENSBTAP00000028993/1-740 KPPGSASEGS IISSSRKPIS ALSPQTDMVD ESHKSSSSQK AYKIVLAGDA 551 600 BACU006680/1-116 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001937/1-736 AVGKSSLLMR LCKNEFRGNT SATLEVDFQL KTLVVDGELT ALQHWDTAGQ bmy_05705T0/1-518 AVGKSSLLMR LCKNEFRGNT SATLGVDFQM KTLIVDGERT VLQLWDTAGQ ENSP00000365630/1-740 AVGKSSFLMR LCKNEFRENI SATLGVDFQM KTLIVDGERT VLQLWDTAGQ ENSBTAP00000028993/1-740 AVGKSSFLMR LCKNEFRGNT SATLGVDFQM KMLIVDGERT VLQLWDTAGQ 601 650 BACU006680/1-116 ----RSIAKS YFRRADGVLL LYDVTCEKSF LNVREWVDMI EVRIQNREPK ENSTTRP00000001937/1-736 EXXSRSIATS YFRRADGVLL LFDVTCEKSF LNVREWEGAV EAAAHDSTPI bmy_05705T0/1-518 ---------- ---------- ------ERQV LSIMLWILL- ---SCTDKPC ENSP00000365630/1-740 ERF-RSIAKS YFRKADGVLL LYDVTCEKSF LNIREWVDMI EDAAHETVPI ENSBTAP00000028993/1-740 ERF-RSIAKS YFRRADGVLL LYDVTCEKSF LNVREWVDMI EDAAHESIPI 651 700 BACU006680/1-116 NYTGELQPVS GNAVC----- ---------- -----LLCQN ELNYKPLI-- ENSTTRP00000001937/1-736 VLVGNKGDLH DAAKA-GQKH VPGYLGE--- MTYRALLCKT NAKDGSNIVE bmy_05705T0/1-518 RILGG----- ---------- ---------- ------FCTH ------IILI ENSP00000365630/1-740 MLVGNKADIR DTAATEGQKC VPGHFGEKLA MTYGALFCET SAKDGSNIVE ENSBTAP00000028993/1-740 MLVGNKADLR DTAEAEGQKC VPGYFGEKLA MTYGALFCET SAKDGSNIVE 701 750 BACU006680/1-116 QALRKNWM-- ---------- ---------- ---------- - ENSTTRP00000001937/1-736 AVLHLSWEGK KRTGEEDSKS ISSLNGTSSK KSAQM-NCCN G bmy_05705T0/1-518 EYVRISRM-- ---------- LVFFHILSSF ADPSVV---- - ENSP00000365630/1-740 AVLHLAREVK KRTDKDDSRS ITNLTGTNSK KSPQMKNCCN G ENSBTAP00000028993/1-740 AVLHLAREVK KRTDEDDSKS ITNLSGTSSK KSTQMKNCCN G