KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:28 2014 Check: 00 .. Name: BACU003840/1-336 Len: 345 Check: 8867 Weight: 1.00 Name: ENSP00000356920/1-340 Len: 345 Check: 4548 Weight: 1.00 Name: ENSBTAP00000028997/1-345 Len: 345 Check: 3797 Weight: 1.00 Name: bmy_19875T0/1-198 Len: 345 Check: 9714 Weight: 1.00 Name: ENSTTRP00000011508/1-340 Len: 345 Check: 4001 Weight: 1.00 // 1 50 BACU003840/1-336 MLEPQYGSHG CERTTGSRTR ASSAEHMLEV RPGLFLGGAA AVAEPDHLRE ENSP00000356920/1-340 MLEAPGPSDG CELSNPSASR VSCAGQMLEV QPGLYFGGAA AVAEPDHLRE ENSBTAP00000028997/1-345 MLEAQEGSHG WEHQIGSQSR ASSARHMLEV RPGLFLGGAA AVAEPDHLRE bmy_19875T0/1-198 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011508/1-340 MLEPQNGSHG CERTAGSRNR ASSAEHMLEV RPGLFLGGAA AVAEPDHLRE 51 100 BACU003840/1-336 AGITSVLTVD SEEPDFNTGA GVEGLRSLFV PALDKPETDL LSHLDRCVAF ENSP00000356920/1-340 AGITAVLTVD SEEPSFKAGP GVEDLWRLFV PALDKPETDL LSHLDRCVAF ENSBTAP00000028997/1-345 AAVTAVLTVD SEEPNFKTGA GVEGLRSLFV PALDKPETDL LSHLDRCVAF bmy_19875T0/1-198 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011508/1-340 AGITAVLTVD SEETDFNTGA GVEGLRSLFV PALDKPETDL LSHLDRCVAF 101 150 BACU003840/1-336 LGQARAEGRA VLVHCHAGVS RSVAVMTAFM MKTDQLTFEK AYENLKTIKP ENSP00000356920/1-340 IGQARAEGRA VLVHCHAGVS RSVAIITAFL MKTDQLPFEK AYEKLQILKP ENSBTAP00000028997/1-345 IVQARAEGRA VLVHCHSGVS RSVTVITAFM MKTDQLTFEE AYENLKTVKP bmy_19875T0/1-198 ---------- ---------- -----MTAFM MKTDQLTFEK AYENLKTIKP ENSTTRP00000011508/1-340 IGQARAEGRA VLVHCHAGVS RSVAVMTAFM MKTDQLTFEK AYENLKTIKP 151 200 BACU003840/1-336 EAKMNEGFEW QLKLYQAMGC EVDTSSAVYK QYRLQKVTEK YPELQNLPQE ENSP00000356920/1-340 EAKMNEGFEW QLKLYQAMGY EVDTSSAIYK QYRLQKVTEK YPELQNLPQE ENSBTAP00000028997/1-345 EAKMNEGFEW QLKLYQAMGC EVDTSSAVYK QYRLQKVTEK YPELQNLPQE bmy_19875T0/1-198 EAKMNEGFEW QLRLYQAMGC EVDTS----- ---------- --KLQNLPQE ENSTTRP00000011508/1-340 EAKVNEGFEW QLKLYQAMGC EVDTSSAIYK QYRLQKVTEK YPELQNLPQE 201 250 BACU003840/1-336 LFAVDPSAIT QGLKDGVLYK CRKCRRSLFR SSSILDHNEG SGPIAFAHKR ENSP00000356920/1-340 LFAVDPTTVS QGLKDEVLYK CRKCRRSLFR SSSILDHREG SGPIAFAHKR ENSBTAP00000028997/1-345 LFAVDPSAIS QGLKDGGLYK CRKCRRSLFR SSSVLDHNEG SGPIAFAHKR bmy_19875T0/1-198 LFAVDPSAXT QGLKDGVLYK CRKCRRSLFR SSSILDHNEG SGPIAFAHKR ENSTTRP00000011508/1-340 LFAVDPSAIT QGLKDGVLYK CRKCRRSLFR SSSILDHNEG SGPIAFAHKR 251 300 BACU003840/1-336 MTPSLMLTTG SQAQCTSYFI EPVQWMESTL LGVMDGQLLC PKCNAKLGSF ENSP00000356920/1-340 MTPSSMLTTG RQAQCTSYFI EPVQWMESAL LGVMDGQLLC PKCSAKLGSF ENSBTAP00000028997/1-345 MTASPMLSAG SQAQCTSYFI EPVQWMESTL LGVMDGQLLC PKCNAKLGSF bmy_19875T0/1-198 MTPSLMLTTG SQAQCTSYFI EPVQWMESTL LGVMDGQLLC PKCNAKLGSF ENSTTRP00000011508/1-340 MTPSFLLTTG SQAQCTSYFI EPVQWMESSL LGVMDGQLLC PKCNAKLGSF 301 350 BACU003840/1-336 NWDISKATL- VWV---FLGN VEEKDISKTL TKMWFSYDTF ----- ENSP00000356920/1-340 NWYGEQCSCG RWITPAFQIH KNRVDEMKIL PVLGSQTGKI ----- ENSBTAP00000028997/1-345 NWYGEQCSCG RWIAPAFQIH KSRVDETKTL PMWGSQTRET GTRYM bmy_19875T0/1-198 NWYGEQCSCG RWITPAFQIH KNRVDEMKML PVWGSQTRKI ----- ENSTTRP00000011508/1-340 NWYGEQCSCG RWITPAFQIH KNRVDEMKML PVWGSQTRKI -----