KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:30 2014 Check: 00 .. Name: ENSBTAP00000029010/1-497 Len: 523 Check: 197 Weight: 1.00 Name: ENSP00000264428/1-497 Len: 523 Check: 901 Weight: 1.00 Name: ENSTTRP00000010560/1-497 Len: 523 Check: 8860 Weight: 1.00 Name: bmy_09257T0/1-518 Len: 523 Check: 3822 Weight: 1.00 Name: BACU010663/1-364 Len: 523 Check: 1678 Weight: 1.00 // 1 50 ENSBTAP00000029010/1-497 ---------- ---------M KFLLAVAFFI L-------IS LCIEEAYSKE ENSP00000264428/1-497 ---------- ---------M KFLLTTAFLI L-------IS LWVEEAYSKE ENSTTRP00000010560/1-497 ---------- ---------M KFVLAVAFFI L-------IS LCVEEACSKE bmy_09257T0/1-518 MPPPAGVRGR AASAAGRPRA AVGLASAPVA FGREDQGGVP ACLLRAAKGK BACU010663/1-364 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000029010/1-497 KSSKKGKGKK KQYLCPSQQS AEDLARVPAN STSNILNRLL VSYDPRIRPN ENSP00000264428/1-497 KSSKKGKGKK KQYLCPSQQS AEDLARVPAN STSNILNRLL VSYDPRIRPN ENSTTRP00000010560/1-497 KSSKKGKGKK KQYLCPSQQS AEDLARVPAN STSNILNRLL VSYDPRIRPN bmy_09257T0/1-518 REEMRLPGRR S--VTPEKPD DEGELGLPRV RRSRAVSYSA GSSE---GDT BACU010663/1-364 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000029010/1-497 FKGIPVDVVV NIFINSFGSI QETTMDYRVN IFLRQKWNDP RLKLPSDFRG ENSP00000264428/1-497 FKGIPVDVVV NIFINSFGSI QETTMDYRVN IFLRQKWNDP RLKLPSDFRG ENSTTRP00000010560/1-497 FKGIPVDVVV NIFINSFGSI QETTMDYRVN IFLRQKWNDP RLKLPSDFRG bmy_09257T0/1-518 AYGIPVDVVV NIFINSFGSI QETTMDYRVN IFLRQKWNDP RLKLPSDFRG BACU010663/1-364 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000029010/1-497 SDALTVDPTM YKCLWKPDLF FANEKSANFH DVTQENILLF IFRDGDVLVS ENSP00000264428/1-497 SDALTVDPTM YKCLWKPDLF FANEKSANFH DVTQENILLF IFRDGDVLVS ENSTTRP00000010560/1-497 SDALTVDPTM YKCLWKPDLF FANEKSANFH DVTQENILLF IFRDGDVLVS bmy_09257T0/1-518 SDALTVDPTM YKCLWKPDLF FANEKSANFH DVTQENILLF IFRDGDVLVS BACU010663/1-364 ---------M YKCLWKPDLF FANEKSANFH DVTQENILLF IFRDGDVLVS 201 250 ENSBTAP00000029010/1-497 MRLSITLSCP LDLTLFPMDT QRCKMQLESF GYTTDDLRFI WQSGDPVQLE ENSP00000264428/1-497 MRLSITLSCP LDLTLFPMDT QRCKMQLESF GYTTDDLRFI WQSGDPVQLE ENSTTRP00000010560/1-497 MRLSITLSCP LDLTLFPMDT QRCKMQLESF GYTTDDLRFI WQSGDPVQLE bmy_09257T0/1-518 MRLSITLSCP LDLTLFPMDT QRCKMQLESF GYTTDDLRFI WQSGDPVQLE BACU010663/1-364 MRLSITLSCP LDLTLFPMDT QRCKMQLESF GYTTDDLRFI WQSGDPVQLE 251 300 ENSBTAP00000029010/1-497 KIALPQFDIK YEGLKFLGCH LYFKGTWYYT CVEVIFTLRR QVGFYMMGVY ENSP00000264428/1-497 KIALPQFDIK KEDIEYGNCT KYYKGTGYYT CVEVIFTLRR QVGFYMMGVY ENSTTRP00000010560/1-497 KIALPQFDIK KEDIEYGNCT KYYKGTGYYT CVEVIFTLRR QVGFYMMGVY bmy_09257T0/1-518 KIALPQFDIK KEDIEYGNCT KYYKGTGYYT CVEVIFTLRR QVGFYMMGVY BACU010663/1-364 KIALPQFDIK KEDIEYGNCT KYYKGTGYYT CVEVIFTLRR QVGFYMMGVY 301 350 ENSBTAP00000029010/1-497 APTLLIVVLS WLSFWINPDA SAARVPLGIF SVLSLASECT TLAAELPKVS ENSP00000264428/1-497 APTLLIVVLS WLSFWINPDA SAARVPLGIF SVLSLASECT TLAAELPKVS ENSTTRP00000010560/1-497 APTLLIVVLS WLSFWINPDA SAARVPLGIF SVLSLASECT TLAAELPKVS bmy_09257T0/1-518 APTLLIVVLS WLSFWINPDA SAARVPLGIF SVLSLASECT TLAAELPKVS BACU010663/1-364 APTLLIVVLS WLSFWINPDA SAARVPLGIF SVLSLASECT TLAAELPKVS 351 400 ENSBTAP00000029010/1-497 YVKALDVWLI ACLLFGFASL VEYAVVQVML NNPKRVEAEK ARIAKAEQAV ENSP00000264428/1-497 YVKALDVWLI ACLLFGFASL VEYAVVQVML NNPKRVEAEK ARIAKAEQAD ENSTTRP00000010560/1-497 YVKALDVWLI ACLLFGFASL VEYAVVQVML NNPKRVEAEK ARIAKAEQAD bmy_09257T0/1-518 YVKALDVWLI ACLLFGFASL VEYAVVQVML NNPKRVEAEK ARIAKAEQAD BACU010663/1-364 YVKALDVWLI ACLLFGFASL VEYAVVQVML NNPKRVEAEK ARIAKAEQAD 401 450 ENSBTAP00000029010/1-497 GKGGNVAKKN TVNGASTPVH ISTLQVGETR CKKVCTSKSD LRSNDFSIVG ENSP00000264428/1-497 GKGGNVAKKN TVNGTGTPVH ISTLQVGETR CKKVCTSKSD LRSNDFSIVG ENSTTRP00000010560/1-497 GKGGSAAKKN TVNGTGTPVH ISTLQVGETR CKKVCTSKSD LRSNDFSIVG bmy_09257T0/1-518 GKGGSAAKKN TVNGTGTPVH ISTLQVGETR CKKVCTSKSD LRSNDFSIVG BACU010663/1-364 GKGGSAAKKN TVNGTGTPVH ISTLQVGETR CKKVCTSKSD LRSNDFSIVG 451 500 ENSBTAP00000029010/1-497 SLPRDFELSN YDCYGKPIEV NNGLGKSQAK NNKKPPPAKP VIPTAAKRID ENSP00000264428/1-497 SLPRDFELSN YDCYGKPIEV NNGLGKSQAK NNKKPPPAKP VIPTAAKRID ENSTTRP00000010560/1-497 SLPRDFELSN YDCYGKPIEV NNGLGKSQAK NNKKPPPAKP VIPTAAKRID bmy_09257T0/1-518 SLPRDFELSN YDCYGKPIEV NNGLGKSQAK SSKKPPPAKP VIPTAAKRID BACU010663/1-364 SLPRDFELSN YDCYGKPIEV NNGLGKSQAK SNKKPPPAKP VIPTAAKRID 501 550 ENSBTAP00000029010/1-497 LYARALFPFC FLFFNVIYWS IYL ENSP00000264428/1-497 LYARALFPFC FLFFNVIYWS IYL ENSTTRP00000010560/1-497 LYARALFPFC FLFFNIIYWS IYL bmy_09257T0/1-518 LYARALFPFC FLFFNVIYWS IYL BACU010663/1-364 LYARALFPFC FLFFNVIYWS IYL