KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:31 2014 Check: 00 .. Name: bmy_09539T0/1-590 Len: 770 Check: 8520 Weight: 1.00 Name: BACU001398/1-493 Len: 770 Check: 6015 Weight: 1.00 Name: ENSTTRP00000000268/1-745 Len: 770 Check: 6217 Weight: 1.00 Name: ENSP00000264414/1-768 Len: 770 Check: 2831 Weight: 1.00 Name: ENSBTAP00000029018/1-768 Len: 770 Check: 2834 Weight: 1.00 // 1 50 bmy_09539T0/1-590 ---------- ---------- ---------- ---------- MEKVSTNNAN BACU001398/1-493 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000268/1-745 ---------- ---------- --MTMDEKYV NSIWDLLKNA IQEIQRKNNS ENSP00000264414/1-768 MSNLSKGTGS RKDTKMRIRA FPMTMDEKYV NSIWDLLKNA IQEIQRKNNS ENSBTAP00000029018/1-768 MSNLSKGTGS RKDTKMRIRA FPMTMDEKYV NSIWDLLKNA IQEIQRKNNS 51 100 bmy_09539T0/1-590 K-------RA AFLVAIRVNG Q--------- ---------- ---------- BACU001398/1-493 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000268/1-745 GLSFEELYRN AYTMVLHKHG EKLYTGLREV VTEHLINKVR EDVLNSLNNN ENSP00000264414/1-768 GLSFEELYRN AYTMVLHKHG EKLYTGLREV VTEHLINKVR EDVLNSLNNN ENSBTAP00000029018/1-768 GLSFEELYRN AYTMVLHKHG EKLYTGLREV VTEHLINKVR EDVLNSLNNN 101 150 bmy_09539T0/1-590 ---------- ---------- -LPIAVDRVY VQQNNVENVY NLGLIIFRDQ BACU001398/1-493 ---------- ---------- ------DRVY VQQNNVENVY NLGLIIFRDQ ENSTTRP00000000268/1-745 FLQTLNQAWN DHQTAMVMIR DILMYMDRVY VQQNNVENVY NLGLIIFRDQ ENSP00000264414/1-768 FLQTLNQAWN DHQTAMVMIR DILMYMDRVY VQQNNVENVY NLGLIIFRDQ ENSBTAP00000029018/1-768 FLQTLNQAWN DHQTAMVMIR DILMYMDRVY VQQNNVENVY NLGLIIFRDQ 151 200 bmy_09539T0/1-590 VVRYGCIRDH LRQTLLDMIA RERKGEVVDR GAIRNACQML MILGLEGRSV BACU001398/1-493 VVRYGCIRDH LRQTLLDMIA RERKGEVVDR GAIRNACQML MILGLEGRSV ENSTTRP00000000268/1-745 VVRYGCIRDH LRQTLLDMIA RERKGEVVDR GAIRNACQML MILGLEGRSV ENSP00000264414/1-768 VVRYGCIRDH LRQTLLDMIA RERKGEVVDR GAIRNACQML MILGLEGRSV ENSBTAP00000029018/1-768 VVRYGCIRDH LRQTLLDMIA RERKGEVVDR GAIRNACQML MILGLEGRSV 201 250 bmy_09539T0/1-590 YEEDFEAPFL EMSAEFFQME SQKFLAENSA SVYIKKVEAR INEEIERVMH BACU001398/1-493 YEEDFEAPFL EMSAEFFQME SQKFLAENSA SVYIKKVEAR INEEIERVMH ENSTTRP00000000268/1-745 YEEDFEAPFL EMSAEFFQME SQKFLAENSA SVYIKKVEAR INEEIERVMH ENSP00000264414/1-768 YEEDFEAPFL EMSAEFFQME SQKFLAENSA SVYIKKVEAR INEEIERVMH ENSBTAP00000029018/1-768 YEEDFEAPFL EMSAEFFQME SQKFLAENSA SVYIKKVEAR INEEIERVMH 251 300 bmy_09539T0/1-590 CLDKSTEEPI VKVVERELIS KHMKTIVEME NSGLVHMLKN GKTEDLACMY BACU001398/1-493 CLDKSTEEPI VKVVERELIS KHMKTIVEME NSGLVHMLKN GKTEDLACMY ENSTTRP00000000268/1-745 CLDKSTEEPI VKVVERELIS KHMKTIVEME NSGLVHMLKN GKTEXXXXXX ENSP00000264414/1-768 CLDKSTEEPI VKVVERELIS KHMKTIVEME NSGLVHMLKN GKTEDLGCMY ENSBTAP00000029018/1-768 CLDKSTEEPI VKVVERELIS KHMKTIVEME NSGLVHMLKN GKTEDLACMY 301 350 bmy_09539T0/1-590 KLFSRVPNGL KTMCECMSSY LREQGKALVS EEGEGKNPVD YIQGLLDLKS BACU001398/1-493 KLFSRVPNGL KTMCECMSSY LREQGKALVS EEGEGKNPVD YIQGLLDLKS ENSTTRP00000000268/1-745 XXXXXXXNGL KTMCECMS-Y LREQGKALVS EEGEGKNPVD YIQGLLDLKS ENSP00000264414/1-768 KLFSRVPNGL KTMCECMSSY LREQGKALVS EEGEGKNPVD YIQGLLDLKS ENSBTAP00000029018/1-768 KLFSRVPNGL KTMCECMSSY LREQGKALVS EEGEGKNPVD YIQGLLDLKS 351 400 bmy_09539T0/1-590 RFDRFLQESF NNDRLFKQTI AGDFEYFLNL NSRSPEYLSL FIDDKLKKGV BACU001398/1-493 RFDRFLQESF NNDRLFKQTI AGDFEYFLNL NSRSPEYLSL FIDDKLKKGV ENSTTRP00000000268/1-745 RFDRFLQESF NNDRLFKQTI AGDFEYFLNL NSRSPEYLSL FIDDKLKKGV ENSP00000264414/1-768 RFDRFLLESF NNDRLFKQTI AGDFEYFLNL NSRSPEYLSL FIDDKLKKGV ENSBTAP00000029018/1-768 RFDRFLQESF NNDRLFKQTI AGDFEYFLNL NSRSPEYLSL FIDDKLKKGV 401 450 bmy_09539T0/1-590 KGLTEQEVET ILDKAMVLFR FMQEKDVFER YYKQHLARRL LTNKSVSDDS BACU001398/1-493 KGLTEQEVET ILDKAMVLFR FMQEKDVFER YYKQHLARRL LTNKSVSDDS ENSTTRP00000000268/1-745 KGLTEQEVET ILDKAMVLFR FMQEKDVFER YYKQHLARRL LTNKSVSDDS ENSP00000264414/1-768 KGLTEQEVET ILDKAMVLFR FMQEKDVFER YYKQHLARRL LTNKSVSDDS ENSBTAP00000029018/1-768 KGLTEQEVET ILDKAMVLFR FMQEKDVFER YYKQHLARRL LTNKSVSDDS 451 500 bmy_09539T0/1-590 EKNMISKLKT ECGCQFTSKL EGMFRDMSIS NTTMDEFRQH LQATGVSLGG BACU001398/1-493 EKNMISKLK- ---------- ---------- ---------- -----VSLGG ENSTTRP00000000268/1-745 EKNMISKLKT ECGCQFTSKL EGMFRDMSIS NTTMDEFRQH LQATGVSLGG ENSP00000264414/1-768 EKNMISKLKT ECGCQFTSKL EGMFRDMSIS NTTMDEFRQH LQATGVSLGG ENSBTAP00000029018/1-768 EKNMISKLKT ECGCQFTSKL EGMFRDMSIS NTTMDEFRQH LQATGVSLGG 501 550 bmy_09539T0/1-590 VDLTVRVLTT GYWPTQSATP KCNIPPAPRH AFEIFRRFYL AKHSGRQLTL BACU001398/1-493 VDLTVRVLTT GYWPTQSATP KCNIPPAPRH AFEIFRRTYV A--------- ENSTTRP00000000268/1-745 VDLTVRVLTT GYWPTQSATP KCNIPPAPRH AFEIFRRFYL AKHSGRQLTL ENSP00000264414/1-768 VDLTVRVLTT GYWPTQSATP KCNIPPAPRH AFEIFRRFYL AKHSGRQLTL ENSBTAP00000029018/1-768 VDLTVRVLTT GYWPTQSATP KCNIPPAPRH AFEIFRRFYL AKHSGRQLTL 551 600 bmy_09539T0/1-590 QHHMGSADLN ATFYGPVKKE D--GSEVGVG GAQVTGSNTR KHILQVSTFQ BACU001398/1-493 ---------- --WRGLWRTG DWPGSSAGS- ---------- ---------- ENSTTRP00000000268/1-745 QHHMGSADLN ATFYGPVKKE D--GSEVGVG GAQVTGSNTR KHILQVSTFQ ENSP00000264414/1-768 QHHMGSADLN ATFYGPVKKE D--GSEVGVG GAQVTGSNTR KHILQVSTFQ ENSBTAP00000029018/1-768 QHHMGSADLN ATFYGPVKKE D--GSEVGVG GAQVTGSNTR KHILQVSTFQ 601 650 bmy_09539T0/1-590 MTILMLFNNR EKYTFEEIQQ ETDIPERELV RALQSLACGK PTQRVLTKEP BACU001398/1-493 ---------- ----FPAL-- ---------- ---------- ---------- ENSTTRP00000000268/1-745 MTILMLFNNR EKYTFEEIQQ ETDIPERELV RALQSLACGK PTQRVLTKEP ENSP00000264414/1-768 MTILMLFNNR EKYTFEEIQQ ETDIPERELV RALQSLACGK PTQRVLTKEP ENSBTAP00000029018/1-768 MTILMLFNNR EKYTFEEIQQ ETDIPERELV RALQSLACGK PTQRVLTKEP 651 700 bmy_09539T0/1-590 KSKEIENGHI FTVNDQFTSK LHRVKIQT-- ---------- GKVKNALIDN BACU001398/1-493 ---------- ---------- -------TVA AKQGESDPER KETRQKVDDD ENSTTRP00000000268/1-745 KSKEIENGHI FTVNDQFTSK LHRVKIQTVA AKQGESDPER KETRQKVDDD ENSP00000264414/1-768 KSKEIENGHI FTVNDQFTSK LHRVKIQTVA AKQGESDPER KETRQKVDDD ENSBTAP00000029018/1-768 KSKEIENGHI FTVNDQFTSK LHRVKIQTVA AKQGESDPER KETRQKVDDD 701 750 bmy_09539T0/1-590 R--------- ---------- ---------- ---------- ---------- BACU001398/1-493 RKHEIEAAIV RIMKSRKKMQ HNVLVAEVTQ QLKARFLPSP VVIKKRIEGL ENSTTRP00000000268/1-745 RKHEIEAAIV RIMKSRKKMQ HNVLVAEVTQ QLKARFLPSP VVIKKRIEGL ENSP00000264414/1-768 RKHEIEAAIV RIMKSRKKMQ HNVLVAEVTQ QLKARFLPSP VVIKKRIEGL ENSBTAP00000029018/1-768 RKHEIEAAIV RIMKSRKKMQ HNVLVAEVTQ QLKARFLPSP VVIKKRIEGL 751 800 bmy_09539T0/1-590 ---------- ---------- BACU001398/1-493 IEREYLARTP EDRKVYTYVA ENSTTRP00000000268/1-745 IEREYLARTP EDRKVYTYVA ENSP00000264414/1-768 IEREYLARTP EDRKVYTYVA ENSBTAP00000029018/1-768 IEREYLARTP EDRKVYTYVA