KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:33 2014 Check: 00 .. Name: ENSP00000363414/1-346 Len: 376 Check: 496 Weight: 1.00 Name: ENSBTAP00000029040/1-350 Len: 376 Check: 1722 Weight: 1.00 Name: ENSTTRP00000011847/1-350 Len: 376 Check: 3687 Weight: 1.00 Name: bmy_02035T0/1-376 Len: 376 Check: 7125 Weight: 1.00 Name: BACU007583/1-350 Len: 376 Check: 3289 Weight: 1.00 // 1 50 ENSP00000363414/1-346 ---------- ---------- --------MA MAQKLSHLLP SLRQVIQEPQ ENSBTAP00000029040/1-350 ---------- ---------- ------MATI VAQKLSHLLP SLRQVHQEPQ ENSTTRP00000011847/1-350 ---------- ---------- ------MATM VAQKLSHLLP SLRQVHQMPR bmy_02035T0/1-376 MGQEGEDTSP LTLFGPLSQL LAPPTAMATM VAQKLSHLLP SLRQVHQMPR BACU007583/1-350 ---------- ---------- ------MATM VAQKLSHLLP SLRQVHQMPQ 51 100 ENSP00000363414/1-346 LSLQPEPVFT VDRAEVPPLF WKPYIYAGYR PLHQTWRFYF RTLFQQHNEA ENSBTAP00000029040/1-350 PSVPSEPVFT VDRAEVPPLF WKPYIYVGYR PLHRTWRFYF RTLFQQHNEA ENSTTRP00000011847/1-350 PSVQPEPVFT VDRAEVPPIF WKPYIYVGYR PLHRTWRFYF RTLFQQHNEA bmy_02035T0/1-376 PSVQPEPVFT VDRAEVPPLF WKPYIYVGYR PLHRTWRFYF RTLFQQHNEA BACU007583/1-350 PSVQPEPVFT VDRAEVPPLF WKPYIYVGYR PLHRTWRFYF RTLFQQHNEA 101 150 ENSP00000363414/1-346 VNVWTHLLAA LVLLLRLALF VETVDFWGDP HALPLFIIVL ASFTYLSFSA ENSBTAP00000029040/1-350 VNVWTHLLAA LVLLLRLAIF VGTVDFWGDP HALPLFIIVL ASFTYLSLSA ENSTTRP00000011847/1-350 VNVWTHLLAA LVLLLRLAIF VGTVDFRGDL HALPLFIIVL ASITYLSLSA bmy_02035T0/1-376 VNVWTHLLAA LVLLLRLAIF VGTVDFWGDL HALPLFIIVL TSFTYLSLSA BACU007583/1-350 VNVWTHLLAA LVLLLRLAIF VGTMDFWGDL HALPLFIIVL TSFTYLSLSA 151 200 ENSP00000363414/1-346 LAHLLQAKSE FWHYSFFFLD YVGVAVYQFG SALAHFYYAI EPAWHAQVQA ENSBTAP00000029040/1-350 LAHLLQAKSE FWHYSFFFLD YVGVAVYQFG SALAHFYYAI EPAWHAQVQT ENSTTRP00000011847/1-350 LAHLLQAKSE FWHYSFFFLD YVGVAVYQFG SALAHFYYAI EPAWHAQVQT bmy_02035T0/1-376 LAHLLQAKSE FWHYSFFFLD YVGVAVYQFG SALAHFYYAI EPAWHAQVQT BACU007583/1-350 LAHLLQAKSE FWHYSFFFLD YVGVAVYQFG SALAHFYYAI EPAWHAQVQT 201 250 ENSP00000363414/1-346 VFLPMAAFLA WLSCIGSCYN KYIQKPGLLG RTCQEVPSVL AYALDISPVV ENSBTAP00000029040/1-350 IFLPTAAFLA WLSCTGSCYN KYIQKPGLLG RTCQEVPSAL AYALDISPVA ENSTTRP00000011847/1-350 FYLPMAAFLA WLSCAGSCYN KYIQKPGLLG RTCQEVPSAL AYALDISPVV bmy_02035T0/1-376 FYLPMAAFLA WLSCAGSCYN KYIQKPGLLG RTCQEVPSAL AYALDISPVV BACU007583/1-350 FYLPMAAFLA WLSCAGSCYN KYIQKPGLLG RTCQEVPSAL AYALDISPVV 251 300 ENSP00000363414/1-346 HRIFVSSDPT TDDPALLYHK CQVVFFLLAA AFFSTFMPER WFPGSCHVFG ENSBTAP00000029040/1-350 HRILVSPDPA TDDPALLYHK CQVVFFLLAA AFFSAFMPER WFPGCCHVFG ENSTTRP00000011847/1-350 HRILVSPNPA TDDPALLYHK CQVVFFLLAA TFFSAFVPER WFPGSCHVFG bmy_02035T0/1-376 HRILVSPNPA MDYPALLYHK CQVVFFLLAA TFFSAFMPER WFPGSCHVFG BACU007583/1-350 HRILVSPNPA MDDPALLYHK CQVVFFLLAA TFFSAFMPER WFPGSCHVFG 301 350 ENSP00000363414/1-346 QGHQLFHIFL VLCTLAQLEA VALDYEARRP IYEPLHTHWP HNFSGLFLLT ENSBTAP00000029040/1-350 QGHQLFHVFL VLCTLAQLEA VALDYEARRS IYEPLHTRWP HNFSGLFLLT ENSTTRP00000011847/1-350 QGHQLFHVFL VLCTLAQLEA VALDYEARRP IYEPLHTRWP HNFSGLFLLT bmy_02035T0/1-376 QGHQLFHVFL VLCTLAQLEA VALDYEARRP IYEPLHTRCP QNFSGLFLLT BACU007583/1-350 QGHQLFHVFL VLCTLAQLEA VTLDYEARRP IYEPLHARWP QNFSGLFLLT 351 400 ENSP00000363414/1-346 VGSSILTAFL LSQLVQRK-- LDQKTK ENSBTAP00000029040/1-350 VGSSILTAFL LSQLVRRKLD LHRKTQ ENSTTRP00000011847/1-350 VGSSILTAFL LSQLVRRKLS LDRKTQ bmy_02035T0/1-376 VGSSILTAFL LSQLVRRKLS LDRKTQ BACU007583/1-350 VGSSILTAFL LSQLVRRKLN LERKTQ