KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:35 2014 Check: 00 .. Name: ENSTTRP00000007940/1-632 Len: 633 Check: 5412 Weight: 1.00 Name: ENSP00000257555/1-631 Len: 633 Check: 2979 Weight: 1.00 Name: ENSBTAP00000029049/1-633 Len: 633 Check: 3110 Weight: 1.00 Name: bmy_05760T0/1-632 Len: 633 Check: 8102 Weight: 1.00 Name: BACU010534/1-628 Len: 633 Check: 9044 Weight: 1.00 // 1 50 ENSTTRP00000007940/1-632 MVSKLSQLQT ELLAALLESG LSKEALIQAL GEPGPYLLAG DGPPDKGESC ENSP00000257555/1-631 MVSKLSQLQT ELLAALLESG LSKEALIQAL GEPGPYLLAG EGPLDKGESC ENSBTAP00000029049/1-633 MVSKLSQLQT ELLAALLESG LSKEALIQAL GEPGPYLLAG DGPLDKGESC bmy_05760T0/1-632 MVSKLSQLQT ELLAALLESG LSKEALIQAL GEPGPYLLAG DGPPDKGESC BACU010534/1-628 MVSKLSQLQT ELLAALLESG LSKEALIQAL GEPGPYLLAG DGPPDKGESC 51 100 ENSTTRP00000007940/1-632 G-GGGRGELA ELPNGLGETR GSEDETDDEG EDFTPPILRE LENLSPEEAA ENSP00000257555/1-631 G--GGRGELA ELPNGLGETR GSEDETDDDG EDFTPPILKE LENLSPEEAA ENSBTAP00000029049/1-633 GSGGSRGELA ELPNGLGETR GSEDETDDDG DDFTPPILKE LESLSPEEAA bmy_05760T0/1-632 G-GGGRGELA ELPNGLGETR GSEDETDDEG EDFTPPILRE LENLSPEEAA BACU010534/1-628 G-GGGRGELA ELPNGLGETR GSEDETDDEG EDFTPPILRE LENLSPEEAA 101 150 ENSTTRP00000007940/1-632 HQKAVVETLL QEDPWRVAKM VKSYLQQHNI PQREVVDTTG LNQSHLSQHL ENSP00000257555/1-631 HQKAVVETLL QEDPWRVAKM VKSYLQQHNI PQREVVDTTG LNQSHLSQHL ENSBTAP00000029049/1-633 HQKAVVETLL QEDPWRVAKM VKSYLQQHNI PQREVVDTTG LNQSHLSQHL bmy_05760T0/1-632 HQKAVVETLL QEDPWRVAKM VKSYLQQHNI PQREVVDTTG LNQSHLSQHL BACU010534/1-628 HQKAVVETLL QEDPWRVAKM VKSYLQQHNI PQREVVDTTG LNQSHLSQHL 151 200 ENSTTRP00000007940/1-632 NKGTPMKTQK RAALYTWYVR KQREVAQXXX XXXXXXXXXX XXXXXXXXXX ENSP00000257555/1-631 NKGTPMKTQK RAALYTWYVR KQREVAQQFT HAGQGGLIEE PTGDELPTKK ENSBTAP00000029049/1-633 NKGTPMKTQK RAALYTWYVR KQREVAQQFT HAGQGGLIEE PAGDELPTKK bmy_05760T0/1-632 NKGTPMKTQK RAALYTWYVR KQREVAQQFT HAGQGGLIEE PTGDELPTKK BACU010534/1-628 NKGTPMKTQK RAALYTWYVR KQREVAQQFT HAGQGGLIEE PTGDELPTKK 201 250 ENSTTRP00000007940/1-632 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000257555/1-631 GRRNRFKWGP ASQQILFQAY ERQKNPSKEE RETLVEECNR AECIQRGVSP ENSBTAP00000029049/1-633 GRRNRFKWGP ASQQILFQAY ERQKNPSKEE REALVEECNR AECIQRGVSP bmy_05760T0/1-632 GRRNRFKWGP ASQQILFQAY ERQKNPSKEE REALVEECNR AECIQRGVSP BACU010534/1-628 GRRNRFKWGP ASQQILFQAY ERQKNPSKEE REALVEECNR AECIQRGVSP 251 300 ENSTTRP00000007940/1-632 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000257555/1-631 SQAQGLGSNL VTEVRVYNWF ANRRKEEAFR HKLAMDTYSG PPPGPGPGPA ENSBTAP00000029049/1-633 SQAQGLGSNL VTEVRVYNWF ANRRKEEAFR HKLAMDTYSG PPPGPGPSPV bmy_05760T0/1-632 SQAQGLGSNL VTEVRVYNWF ANRRKEEAFR HKLAMDTYSG PPPGPGPGPA BACU010534/1-628 SQAQGLGSNL VTEVRVYNWF ANRRKEEAFR HKLAMDTYSG PPPGPGPGPA 301 350 ENSTTRP00000007940/1-632 XXXXXXXXXX XXXXXXXXXX XVRYGQPATS EGAEVPSSSG GPLVTVSAPL ENSP00000257555/1-631 LPAHSSPGLP PPALSPSKVH GVRYGQPATS ETAEVPSSSG GPLVTVSTPL ENSBTAP00000029049/1-633 LPAHSSPGLP PPALSPSKVH GVRYGQPATS EGAEVPSSSG GPLVTVSAPL bmy_05760T0/1-632 LPAHGSPGLP PPALSPGKVH GVRYGQPASS EGAEVPSSSG GPLVTVSAPL BACU010534/1-628 LPAHGSPGLP PPALSP---- GVRYGQPASS EGAEVPSSSG GPLVTVSAPL 351 400 ENSTTRP00000007940/1-632 HQVSPTGLEP SHSLLSTEAK LVSATGGPLP PVSTLTALHS LEQTSPGLNQ ENSP00000257555/1-631 HQVSPTGLEP SHSLLSTEAK LVSAAGGPLP PVSTLTALHS LEQTSPGLNQ ENSBTAP00000029049/1-633 HQVSPTGLEP SHSLLSTEAK LVSATGGPLP PVSTLTALHS LEQTSPGLSQ bmy_05760T0/1-632 HQVSPTGLEP SHSLLSTEAK LVSATGGPLP PVSTLTALHS LEQTSPGLSQ BACU010534/1-628 HQVSPTGLEP SHSLLSTEAK LVSASGSPLP PVSTLTALHS QEQTSPGLSQ 401 450 ENSTTRP00000007940/1-632 QPQNLIMASL PGVMAIGPGE PASLGPTFTN TGTSTLVIXX XXXXXXXXXX ENSP00000257555/1-631 QPQNLIMASL PGVMTIGPGE PASLGPTFTN TGASTLVIGL ASTQAQSVPV ENSBTAP00000029049/1-633 QPQNLIMASL PGVMAIGPGE PASLGPTFTN TGASTLVIGL ASTQAQSVPV bmy_05760T0/1-632 QPQNLIMASL PGVMAIGPGE PASLGPTFTN TGASTLVIGL ASTQAQSVPV BACU010534/1-628 QPQNLIMASL PGVMAIGPGE PASLGPTFTN TGASTLVIGL ASTQAQSVPV 451 500 ENSTTRP00000007940/1-632 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000257555/1-631 INSMGSSLTT LQPVQFSQPL HPSYQQPLMP PVQSHVTQSP FMATMAQLQS ENSBTAP00000029049/1-633 INSMGSSLTT LQPVQFSQPL HPSYQQPLMP SVQSHVAQSP FMATMAQLQS bmy_05760T0/1-632 INSMGSSLTT LQPVQFSQPL HPSYQQPLMP SVQSHVAQSP FMATMAQLQS BACU010534/1-628 INSMGSSLTT LQPVQFSQPL HPSYQQPLMP SVQSHVAQSP FMATMAQLQS 501 550 ENSTTRP00000007940/1-632 XXXLYSHKPE VAQYTHTGLL PQTMLITDTT NLSALASLTP TKQVFTSDAE ENSP00000257555/1-631 PHALYSHKPE VAQYTHTGLL PQTMLITDTT NLSALASLTP TKQVFTSDTE ENSBTAP00000029049/1-633 PHALYSHKPE VAQYTHTGLL PQTMLITDTT NLSALASLTP TKQVFTSDAE bmy_05760T0/1-632 PHALYSHKPE VAQYTHTGLL PQTMLITDTT NLSALASLTP TKQVFTSDAE BACU010534/1-628 PHALYSHKPE VAQYTHTGLL PQTMLITDTT NLSALASLTP TKQVFTSDAE 551 600 ENSTTRP00000007940/1-632 ASSESGLHTP ASQAATIHIP SQDPAGIQHL QPTHRLSASP TVSSSSLVLY ENSP00000257555/1-631 ASSESGLHTP ASQATTLHVP SQDPASIQHL QPAHRLSASP TVSSSSLVLY ENSBTAP00000029049/1-633 ASSESGLHTP VSQTTTIHIP GQDPAGIQQL QPSHRLSASP TVPSSSLVLY bmy_05760T0/1-632 ASSESGLHTP ASQAATIHIP SQDPAGIQHL QPTHRLSASP TVSSSSLVLY BACU010534/1-628 ASSESGLHTP ASQAATIHIP SQDPAGIQHL QPTHRLSASP TVSSSSLVLY 601 650 ENSTTRP00000007940/1-632 QSSDSTNGHS HLLPSNHSVI ETFISTQMAS SSQ ENSP00000257555/1-631 QSSDSSNGQS HLLPSNHSVI ETFISTQMAS SSQ ENSBTAP00000029049/1-633 QSSDSTNGHS HLLPSNHSVT ETFISTQMAS SSQ bmy_05760T0/1-632 QSSDSTNGHG HLLPSNHSVI ETFISTQMAS SSQ BACU010534/1-628 QSSDSANGHG HLLPSNHSVI ETFISTQMAS SSQ