KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:37:37 2014 Check: 00 .. Name: ENSTTRP00000005806/1-143 Len: 181 Check: 7320 Weight: 1.00 Name: ENSP00000454021/1-155 Len: 181 Check: 9705 Weight: 1.00 Name: bmy_09284T0/1-130 Len: 181 Check: 1597 Weight: 1.00 Name: ENSBTAP00000029063/1-129 Len: 181 Check: 912 Weight: 1.00 // 1 50 ENSTTRP00000005806/1-143 MS-------- -----GGRRK EEPPQPLLAN GALKVSVWSK VLRSDAAWED ENSP00000454021/1-155 MSDSDLGEDE GLLSLAGKRK RRGNLPKESV KILR--DWLY LHRYNAYPSE bmy_09284T0/1-130 MS-------- -----GGRRK EEPPQPQLAN GALKVSVWSK VLRSDAAWED ENSBTAP00000029063/1-129 MS-------- -----GGRRK EEPSQLQLAN GALKVSVWSK VLRSDAAWED 51 100 ENSTTRP00000005806/1-143 ---------- -----KDEFL DVIYWFRQII AVVLGVIWGV LPLRGFLGIA ENSP00000454021/1-155 QEKLSLSGQT NLSVLQDEFL DVIYWFRQII AVVLGVIWGV LPLRGFLGIA bmy_09284T0/1-130 ---------- -----KDEFL DVIYWFRQII AVVLGVIWGV LPLRGFLGIA ENSBTAP00000029063/1-129 ---------- -----KDEFL DVIYWFRQII AVVLGVIWGV LPLRGFLGIA 101 150 ENSTTRP00000005806/1-143 GSFGSSFTLP STMTDGAQAP PAPCLVQRTL LVT------P QKHDCWGTPA ENSP00000454021/1-155 GF-------- ---------- ---CLINAGV LYLYFSNYLQ IDEEEYG--G bmy_09284T0/1-130 GF-------- ---------- ---CLINAGV LYLYFSNYLQ IDEEEYG--G ENSBTAP00000029063/1-129 GF-------- ---------- ---CLINAGV LYVYFSNYLQ IDEEEYG--G 151 200 ENSTTRP00000005806/1-143 TRNLEDPCFL DRES---VCW ASVFSARVVT - ENSP00000454021/1-155 TWELTKEGFM TSFALFMVIW IIFYTAIHYD - bmy_09284T0/1-130 TWELTKEGFM TSFALFMVCV ADNFTAGFVI S ENSBTAP00000029063/1-129 TWELTKEGFM TSFALFMVIW IIFYTAVHYD -