KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:38 2014 Check: 00 .. Name: ENSP00000241051/1-511 Len: 511 Check: 4816 Weight: 1.00 Name: ENSBTAP00000029070/1-511 Len: 511 Check: 9848 Weight: 1.00 Name: ENSTTRP00000015503/1-511 Len: 511 Check: 7464 Weight: 1.00 Name: bmy_16590T0/1-506 Len: 511 Check: 7877 Weight: 1.00 Name: BACU008883/1-498 Len: 511 Check: 8739 Weight: 1.00 // 1 50 ENSP00000241051/1-511 MATVQEKAAA LNLSALHSPA HRPPGFSVAQ KPFGATYVWS SIINTLQTQV ENSBTAP00000029070/1-511 MATVREKAAA LNLSAFQSPV QRPPGFSVAQ KPFGATYVWS SIINTLQTQV ENSTTRP00000015503/1-511 MATVREKAAA LNLTAFQSPA QRPPSFSVAQ KPFGATYVWS SIINTLQTQV bmy_16590T0/1-506 MATVREKAAA LNLSALQSPA QRPPGFSVAQ KPFGATYVWS SIINTLQTQV BACU008883/1-498 MSEV------ -------TVT FRIPGFSVAQ KPFGATYVWS SIINTLQTQV 51 100 ENSP00000241051/1-511 EVKKRRHRLK RHNDCFVGSE AVDVIFSHLI QNKYFGDVDI PRAKVVRVCQ ENSBTAP00000029070/1-511 EVKKRRHHLK RHNDCFVGSE AVDVIFSHLM QNKYFGDVDI PRAKVVRVCQ ENSTTRP00000015503/1-511 EVKKRRHHLK RHNDCFVGSE AVDVIFSHLI QNKYFGDVDI PRAKVVRVCQ bmy_16590T0/1-506 EVKKRRHHLK RHNDCFVGSE AVDVIFSHLI QNKYFGDVDI PRAKVVRVCQ BACU008883/1-498 EVKKRRHHLK RHNDCFVGSE AVDVIFSHLI QNKYFGDVDI PRAKVVRVCQ 101 150 ENSP00000241051/1-511 ALMDYKVFEA VPTKVFGKDK KPTFEDSSCS LYRFTTIPNQ DSQLGKENKL ENSBTAP00000029070/1-511 ALMDYKVFEA VPTKVFGKDK KPTFEDSSCS LYRFTTTPNQ DSQLGKENKV ENSTTRP00000015503/1-511 ALMDYKVFEA VPTKVFGKDK KPTFEDSSCS LYRFTTIPNQ DSQLGKENKL bmy_16590T0/1-506 ALMDYKVFEA VPTKVFGKDK KPTFEDSSCS LYRFTTIPNQ DSQLGKENKL BACU008883/1-498 ALMDYKVFEA VPTKVFGKDK KPTFEDSSCS LYRFTTIPNQ DSQLGKENKL 151 200 ENSP00000241051/1-511 YSPARYADAL FKSSDIRSAS LEDLWENLSL KPANSPHVNI SATLSPQVIN ENSBTAP00000029070/1-511 CSPSRYADTL FKSSDIRSTS LEALWENLSL KPADSPRVNI SATLSPQVIN ENSTTRP00000015503/1-511 FSPSRYADAL FKSSDIKSAS LEDLWENLSL KPAESPHVNI SANLSPQVVN bmy_16590T0/1-506 -----YADAL FKSSDIKSAS LEDLWENLSL KPADSPHVNI SANLSPQVIH BACU008883/1-498 FSPSRYADAL FKSSDIKSAS LEDLWENLSL KPADSPHVNI SANLSPQVIN 201 250 ENSP00000241051/1-511 EVWQEETIGR LLQLVDLPLL DSLLKQQEAV PKIPQPKRQS TMVNSSNYLD ENSBTAP00000029070/1-511 EVWQEETIGR LLQLIDLPLL DSLLKRQEMI PKVSQPKRQL DLVNNRNYLD ENSTTRP00000015503/1-511 EVWQEETVGR LLQLIDLPLL DSLLKRQEVV PKVTQPKRQP DLVSNRNYLD bmy_16590T0/1-506 EVWQEETVGR LLQLIDLPLL DSLLKRQEVV PKVTQPKRQP DLVNNRNYLD BACU008883/1-498 EVWQEETVGR LLQLIDLPLL DSLLKRQEVV PKVTQPKRQP DLVNNRNYLD 251 300 ENSP00000241051/1-511 RGILKAYSDS QEDEWLSAAI DCLEYLPDQM VVEISRSFPE QPDRTDLVKE ENSBTAP00000029070/1-511 RGILKAYSDS QEDEWLSSAI DCLEYLPDQM VVDISRNFPE QPDRIDLVKE ENSTTRP00000015503/1-511 RGILKAYSES QEDEWLSSAI DCLEYLPDQM VVDISRNFPE QPDRTDLVKE bmy_16590T0/1-506 RGILKAYGES QEDEWLSSAI DCLEYLPDQM VVDISRNFPE QPDRIDLVKE BACU008883/1-498 RGILKAYGES QEDEWLSSAI DCLEYLPDQM VVDISRNFPE QPDRIDLVKE 301 350 ENSP00000241051/1-511 LLFDAIGRYY SSREPLLNHL SDVHNGIAEL LVNGKTEIAL EATQLLLKLL ENSBTAP00000029070/1-511 LLFDAISKYY SSREPLLNHL SDVHNGIAEL LVNGKTEIAL EATQLFLKLL ENSTTRP00000015503/1-511 LLFDAISKYY SSREPLLNHL SDVHNGIAEL LVNGKTEIAL EATQLFLKLL bmy_16590T0/1-506 LLFDAISKYY SSREPLLNHL SDVHNGIAEL LVNGKTEIAL EATQLFLKLL BACU008883/1-498 LLFNAISKYY SSREPLLNHL SDVHNGIAEL LVNGKTEIAL EATQLFLKLL 351 400 ENSP00000241051/1-511 DFQNREEFRR LLYFMAVAAN PSEFKLQKES DNRMVVKRIF SKAIVDNKNL ENSBTAP00000029070/1-511 DSQNREEFRR LLYFMAVAAH PSEFKLQQES DNRMVVKRMF SKAIVHNKNL ENSTTRP00000015503/1-511 DSQNREEFRR LLYFMAVAAH PSELKLQKES DNRMVVKRIF SKAIVDNKNL bmy_16590T0/1-506 DSQNREEFRR LLYFMAVAAH PSEFKLQKES DNRMVVKRIF SKAIVDNKNL BACU008883/1-498 DSQNREEFRR LLYFMAVAAH PSEFKLQKES DNRMVVKRIF SKAIVDNKNL 401 450 ENSP00000241051/1-511 SKGKTDLLVL FLMDHQKDVF KIPGTLHKIV SVKLMAIQNG RDPNRDAGYI ENSBTAP00000029070/1-511 SKGKTDLLVL FLMDHQRDVF KDPGTLHKIV SIKLMDIQKG RDPNRDAGYI ENSTTRP00000015503/1-511 SKGKTDLLVL FLMDHQKDVF KIPGTLHKIV SVKLMDIQKG RDPNRDTGYI bmy_16590T0/1-506 SKGKTDLLVL FLMDHQKDVF KIPGTLHKIV SVKLMDIQKG RDPNRDTGYI BACU008883/1-498 SKGKTDLLVL FLMDHQKDVF KIPGTLHKIV SVKLMDIQKG RDPNRDAGYI 451 500 ENSP00000241051/1-511 YCQRIDQRDY SNNTEKTTKD ELLNLLKTLD EDSKLSAKEK KKLLGQFYKC ENSBTAP00000029070/1-511 YCQRIDRSDY SDHTRKTTKD ELLNLLKNID EDSKLSTKEK KKLLGQFYKC ENSTTRP00000015503/1-511 YCQRIDQSDY SDHTRKTTKD ELMNLLKNID EDSKLSAKEK KKLLGQFYKC bmy_16590T0/1-506 YCQRIDQSDY SDHTRKTTKD ELMSLLKNID EDSKLSAKEK KKLLAXFYKC BACU008883/1-498 YCQRIDQSDY SDHTRKTTKD ELMNLLKNID EDSKLSAKEK KKLLAQFYKC 501 550 ENSP00000241051/1-511 HPDIFIEHFG D ENSBTAP00000029070/1-511 HPDVFIEYFG D ENSTTRP00000015503/1-511 HPDIFIEYFG D bmy_16590T0/1-506 HPDIFIEYFG D BACU008883/1-498 HPDIFIEYFG D