KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:39 2014 Check: 00 .. Name: ENSTTRP00000004351/1-818 Len: 882 Check: 9296 Weight: 1.00 Name: bmy_05801T0/1-858 Len: 882 Check: 3792 Weight: 1.00 Name: BACU007984/1-818 Len: 882 Check: 890 Weight: 1.00 Name: ENSBTAP00000029071/1-820 Len: 882 Check: 4911 Weight: 1.00 Name: ENSP00000310723/1-820 Len: 882 Check: 3828 Weight: 1.00 // 1 50 ENSTTRP00000004351/1-818 MAGEL----- ----AD---- ---------- ---------- ------KKDR bmy_05801T0/1-858 MFGEPHCPAA PAARADALTV HSGFGSSQAL AVGLRCPAPG TRLPSLPRGR BACU007984/1-818 MAGEL----- ----AD---- ---------- ---------- ------KKDR ENSBTAP00000029071/1-820 MAGEL----- ----AD---- ---------- ---------- ------KKDR ENSP00000310723/1-820 MAGEL----- ----AD---- ---------- ---------- ------KKDR 51 100 ENSTTRP00000004351/1-818 EASPSK---- ---------- ---------E ERKRSRTPDR ERDRDRDRKS bmy_05801T0/1-858 GSSPATRKRE RWRLLGDVEA ALGGSDSGVE ERKRSRTPDR ERDRDRDRKS BACU007984/1-818 EASPSK---- ---------- ---------E ERKRSRTPDR ERDRDRDRKS ENSBTAP00000029071/1-820 DASPSK---- ---------- ---------E ERKRSRTPDR DRDRDRDRKS ENSP00000310723/1-820 DASPSK---- ---------- ---------E ERKRSRTPDR ERDRDRDRKS 101 150 ENSTTRP00000004351/1-818 SPSKDRKRHR SRERRRGGSR SRSRSRSKST ERERRHKERE RDKERDRNKK bmy_05801T0/1-858 SPSKDRKRHR SRERRRGGSR SRSRSRSKST ERERRHKERE RDKERDRNKK BACU007984/1-818 SPSKDRKRHR SRERRRGGSR SRSRSRSKST ERERRHKERE RDKERDRNKK ENSBTAP00000029071/1-820 SPSKDRKRHR SRDRRRGVSR SRSRSRSKST ERDRRHKERE RDKERDRNKK ENSP00000310723/1-820 SPSKDRKRHR SRDRRRGGSR SRSRSRSKSA ERERRHKERE RDKERDRNKK 151 200 ENSTTRP00000004351/1-818 DRDRDKDGHR R--DRKRSSL SPGRGKDFKS RKDRDSRKDE EDEHGDKKPK bmy_05801T0/1-858 DRDRDKDGHR R--DRKRSSL SPGRGKDFKS RKDRDSRKDE EDEHGDKKPK BACU007984/1-818 DRDRDKDGHR R--DRKRSSL SPGRGKDFKS RKDRDSRKDE EDEHGDKKPK ENSBTAP00000029071/1-820 DRDRDKDGHR RDKDRKRSSL SPGRGKDFKS RKDRDSRKDE EDEHGDKKPK ENSP00000310723/1-820 DRDRDKDGHR RDKDRKRSSL SPGRGKDFKS RKDRDSKKDE EDEHGDKKPK 201 250 ENSTTRP00000004351/1-818 AQPLSLEELL AKKKAEEEAE AKPKFLSKAE REAEALKRRQ QEVEERQRML bmy_05801T0/1-858 ---------- ---------- --PKFLSKAE REAEALKRRQ QEVEERQRLL BACU007984/1-818 AQPLSLEELL AKKKAEEEAE AKPKFLSKAE REAEALKRRQ QEVEERQRLL ENSBTAP00000029071/1-820 AQPLSLEELL AKKKAEEEAE AKPKFLSKAE REAEALKRRQ QEVEERQRML ENSP00000310723/1-820 AQPLSLEELL AKKKAEEEAE AKPKFLSKAE REAEALKRRQ QEVEERQRML 251 300 ENSTTRP00000004351/1-818 EEERKKRKQF QDLGRKMLED PQERERRERR ERMERETNGN EDEEGRQKIR bmy_05801T0/1-858 EEERKKRKQF QDMGRKMLED PQERERRERR ERMERETNGN EDEEGRQKIR BACU007984/1-818 EEERKKRKQF QDLGRKMLED PQERERRERR ERMERETNGN EDEEGRQKIR ENSBTAP00000029071/1-820 EEERKKRKQF QDLGRKMLED PQERERRERR ERMERETNGN EDEEGRQKIR ENSP00000310723/1-820 EEERKKRKQF QDLGRKMLED PQERERRERR ERMERETNGN EDEEGRQKIR 301 350 ENSTTRP00000004351/1-818 EEKDKSKELH AIKERYLGGI KKRRRTRHLN DRKFVFEWDA SEDTSIDYNP bmy_05801T0/1-858 EEKDKSKELH AIKERYLGGI KKRRRTRHLN DRKFVFEWDA SEDTSIDYNP BACU007984/1-818 EEKDKSKELH AIKERYLGGI KKRRRTRHLN DRKFVFEWDA SEDTSIDYNP ENSBTAP00000029071/1-820 EEKDKSKELH AIKERYLGGI KKRRRTRHLN DRKFVFEWDA SEDTSIDYNP ENSP00000310723/1-820 EEKDKSKELH AIKERYLGGI KKRRRTRHLN DRKFVFEWDA SEDTSIDYNP 351 400 ENSTTRP00000004351/1-818 LYKERHQVQL LGRGFIAGID LKQQKREQSR FYGDLMEKRR TLEEKEQEEA bmy_05801T0/1-858 LYKERHQVQL LGRGFIAGID LKQQKREQSR FYGDLMEKRR TLEEKEQEEA BACU007984/1-818 LYKERHQVQL LGRGFIAGID LKQQKREQSR FYGDLMEKRR TLEEKEQEEA ENSBTAP00000029071/1-820 LYKERHQVQL LGRGFIAGID LKQQKREQSR FYGDLMEKRR TLEEKEQEEA ENSP00000310723/1-820 LYKERHQVQL LGRGFIAGID LKQQKREQSR FYGDLMEKRR TLEEKEQEEA 401 450 ENSTTRP00000004351/1-818 RLRKLRKKEA KQRWDDRHWS QKKLDEMTDR DWRIFREDYS ITTKGGKIPN bmy_05801T0/1-858 RLRKLRKKEA KQRWDDRHWS QKKLDEMTDR DWRIFREDYS ITTKGGKIPN BACU007984/1-818 RLRKLRKKEA KQRWDDRHWS QKKLDEMTDR DWRIFREDYS ITTKGGKIPN ENSBTAP00000029071/1-820 RLRKLRKKEA KQRWDDRHWS QKKLDEMTDR DWRIFREDYS ITTKGGKIPN ENSP00000310723/1-820 RLRKLRKKEA KQRWDDRHWS QKKLDEMTDR DWRIFREDYS ITTKGGKIPN 451 500 ENSTTRP00000004351/1-818 PIRSWKDSSL PPHILEVIDK CGYKXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_05801T0/1-858 PIRSWKDSSL PPHILEVIDK CGYKEPTPIQ RQAIPIGLQN RDIIGVAETG BACU007984/1-818 PIRSWKDSSL PPHILEVIDK CGYKEPTPIQ RQAIPIGLQN RDIIGVAETG ENSBTAP00000029071/1-820 PIRSWKDSSL PPHILEVIDK CGYKEPTPIQ RQAIPIGLQN RDIIGVAETG ENSP00000310723/1-820 PIRSWKDSSL PPHILEVIDK CGYKEPTPIQ RQAIPIGLQN RDIIGVAETG 501 550 ENSTTRP00000004351/1-818 XXXXXXXXXX XXXXXXXXXX XXXIEESDQG PYAIILAPTR ELAQQIEEET bmy_05801T0/1-858 SGKTAAFLIP LLVWITTLPK IDRIEESDQG PYAIILAPTR ELAQQIEEET BACU007984/1-818 SGKTAAFLIP LLVWITTLPK IDRIEESDQG PYAIILAPTR ELAQQIEEET ENSBTAP00000029071/1-820 SGKTAAFLIP LLVWITTLPK IDRIEESDQG PYAIILAPTR ELAQQIEEET ENSP00000310723/1-820 SGKTAAFLIP LLVWITTLPK IDRIEESDQG PYAIILAPTR ELAQQIEEET 551 600 ENSTTRP00000004351/1-818 IKFGKPLGIR TVAVIGGISR EDQGFRLRMG CEIVIATPGR LIDVLENRYL bmy_05801T0/1-858 IKFGKPLGIR TVAVIGGISR EDQGFRLRMG CEIVIATPGR LIDVLENRYL BACU007984/1-818 IKFGKPLGIR TVAVIGGISR EDQGFRLRMG CEIVIATPGR LIDVLENRYL ENSBTAP00000029071/1-820 IKFGKPLGIR TVAVIGGISR EDQGFRLRMG CEIVIATPGR LIDVLENRYL ENSP00000310723/1-820 IKFGKPLGIR TVAVIGGISR EDQGFRLRMG CEIVIATPGR LIDVLENRYL 601 650 ENSTTRP00000004351/1-818 VLSRCTYVVL DEADRMIDMG FEPDVQKILE HMPVSNQKPD TDEAEDPEKM bmy_05801T0/1-858 VLSRCTYVVL DEADRMIDMG FEPDVQKILE HMPVSNQKPD TDEAEDPEKM BACU007984/1-818 VLSRCTYVVL DEADRMIDMG FEPDVQKILE HMPVSNQKPD TDEAEDPEKM ENSBTAP00000029071/1-820 VLSRCTYVVL DEADRMIDMG FEPDVQKILE HMPVSNQKPD TDEAEDPEKM ENSP00000310723/1-820 VLSRCTYVVL DEADRMIDMG FEPDVQKILE HMPVSNQKPD TDEAEDPEKM 651 700 ENSTTRP00000004351/1-818 LANFESGKHK YRQTVMFTAT MPPAVERLAR SYLRRPAVVY IGSAGKPHER bmy_05801T0/1-858 LANFESGKHK YRQTVMFTAT MPPAVERLAR SYLRRPAVVY IGSAGKPHER BACU007984/1-818 LANFESGKHK YRQTVMFTAT MPPAVERLAR SYLRRPAVVY IGSAGKPHER ENSBTAP00000029071/1-820 LANFESGKHK YRQTVMFTAT MPPAVERLAR SYLRRPAVVY IGSAGKPHER ENSP00000310723/1-820 LANFESGKHK YRQTVMFTAT MPPAVERLAR SYLRRPAVVY IGSAGKPHER 701 750 ENSTTRP00000004351/1-818 VEQKVFLMSE SEKRKKLLAI LEQGFDPPII IFVNQKKGCD VLAKSLEKMG bmy_05801T0/1-858 VEQKVFLMSE SEKRKKLLAI LEQGFDPPII IFVNQKKGCD VLAKSLEKMG BACU007984/1-818 VEQKVFLMSE SEKRKKLLAI LEQGFDPPII IFVNQKKGCD VLAKSLEKMG ENSBTAP00000029071/1-820 VEQKVFLMSE SEKRKKLLAI LEQGFDPPII IFVNQKKGCD VLAKSLEKMG ENSP00000310723/1-820 VEQKVFLMSE SEKRKKLLAI LEQGFDPPII IFVNQKKGCD VLAKSLEKMG 751 800 ENSTTRP00000004351/1-818 YNACTLHGGK GQEQREFALS NLKAGAKDIL VATDVAGRGI DIQDVSMVVN bmy_05801T0/1-858 YNACTLHGGK GQEQREFALS NLKAGAKDIL VATDVAGRGI DIQDVSMVVN BACU007984/1-818 YNACTLHGGK GQEQREFALS NLKAGAKDIL VATDVAGRGI DIQDVSMVVN ENSBTAP00000029071/1-820 YNACTLHGGK GQEQREFALS NLKAGAKDIL VATDVAGRGI DIQDVSMVVN ENSP00000310723/1-820 YNACTLHGGK GQEQREFALS NLKAGAKDIL VATDVAGRGI DIQDVSMVVN 801 850 ENSTTRP00000004351/1-818 YDMAKNIEDY IHRIGRTGRA GKSGVAITFL TKEDSAVFYE LKQAILESPV bmy_05801T0/1-858 YDMAKNIEDY IHRIGRTGRA GKSGVAITFL TKEDSAVFYE LKQAILESPV BACU007984/1-818 YDMAKNIEDY IHRIGRTGRA GKSGVAITFL TKEDSAVFYE LKQAILESPV ENSBTAP00000029071/1-820 YDMAKNIEDY IHRIGRTGRA GKSGVAITFL TKEDSAVFYE LKQAILESPV ENSP00000310723/1-820 YDMAKNIEDY IHRIGRTGRA GKSGVAITFL TKEDSAVFYE LKQAILESPV 851 900 ENSTTRP00000004351/1-818 SSCPPELANH PDAQHKPGTI LTKKRREETI FA bmy_05801T0/1-858 SSCPPELANH PDAQHKPGTI LTKKRREETI FA BACU007984/1-818 SSCPPELANH PDAQHKPGTI LTKKRREETI FA ENSBTAP00000029071/1-820 SSCPPELANH PDAQHKPGTI LTKKRREETI FA ENSP00000310723/1-820 SSCPPELANH PDAQHKPGTI LTKKRREETI FA