KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:39 2014 Check: 00 .. Name: ENSP00000371347/1-503 Len: 550 Check: 8644 Weight: 1.00 Name: ENSBTAP00000029073/1-498 Len: 550 Check: 5433 Weight: 1.00 Name: BACU015611/1-539 Len: 550 Check: 9624 Weight: 1.00 Name: bmy_08913T0/1-389 Len: 550 Check: 2050 Weight: 1.00 Name: ENSTTRP00000009156/1-498 Len: 550 Check: 6116 Weight: 1.00 // 1 50 ENSP00000371347/1-503 MLSQLAMLQG SLLLVVATMS VAQQTRQEAD RGCETLVVQH GHCSYTFLLP ENSBTAP00000029073/1-498 MPSPPAMLLG GLLLIVASTT VAQRRGQEAA GRRRAHRVQH GQCSYTFVLP BACU015611/1-539 ------MLLS GLLLIVATTT VAQRRGQETG GRRRAHRVQH GQCSYTFVLP bmy_08913T0/1-389 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009156/1-498 MPSRPAMLLS GLLLIVATTT VAQRRGQEAG GRRRAHRVQH GQCSYTFVLP 51 100 ENSP00000371347/1-503 KSEPCPPGPE VSRDSNTLQR ESLANPLHLG KLPTQQVKQL EQALQNNTQW ENSBTAP00000029073/1-498 EPEPCPPEPE AFGGSNSLQR DSPAATLNLG DWPSQRMRQL EKMLENNTQW BACU015611/1-539 EPEPCPPEPD AFGGSNSLQR DSPAAALNLG DWPTQRVRQL EKMLENNTQW bmy_08913T0/1-389 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009156/1-498 EPEPCPPEPE AFGGSNSLQR DSPAAALNLG DWPTQRVRQL EKMLENNTQW 101 150 ENSP00000371347/1-503 LKKLERAIKT ILRSKLEQVQ QQMAQNQTAP MLELGTSLLN QTTAQIRKLT ENSBTAP00000029073/1-498 LQKLERYIQM NLRLELAQAQ QHMVQNQTAT MLELGTSLLT QTTAQTRKLT BACU015611/1-539 LQKLERYIQM NLRLELAQAQ QHMVQNQTAT MLELGTSLLN QTTAQTRKLT bmy_08913T0/1-389 ---------M NLRLELAQAQ QHMVQNQTAT MLELGTSLLN QTTAQTRKLT ENSTTRP00000009156/1-498 LQKLERYIQM NLRLELAQAQ QHMVQNQTAT MLELGTSLLN QTTAQTRKLT 151 200 ENSP00000371347/1-503 DMEAQLLNQT SRMDAQMPET FLSTNKLENQ LLLQRQKLQQ LQGQNSALEK ENSBTAP00000029073/1-498 DVEAQVLNQT SRMEIQLLET SLSTNKLEKQ LLLQGHELHR LQGHNSALET BACU015611/1-539 DVEAQVLNQT SRMEIQLLET SLSTNKLEKQ LLLQGHELHQ LQGHNSALET bmy_08913T0/1-389 DVEAQVLNQT SRMEIQLLET SLSTNKLEKQ LLLQGHELHR LQGHNSALET ENSTTRP00000009156/1-498 DVEAQVLNQT SRMEIQLLET SLSTNKLERQ LLLQGHELHR LQDHNSALET 201 250 ENSP00000371347/1-503 RLQALETKQQ EELASILSKK AKLLNTLSRQ SAALTNIERG LRGVRHNSSL ENSBTAP00000029073/1-498 RVQALETQQQ AELASLRGEK ERLRRLLGRQ SGALAGLERT LRAASSNSSL BACU015611/1-539 RVQALETQQQ AELASLRGEK ERLRRLLGRQ SGALAVLERS LRAASSNSSL bmy_08913T0/1-389 RVQALETQQQ AELASLRGEK ERLRRLLGRQ SGALAGLERS LRAASSNSSL ENSTTRP00000009156/1-498 RVQALETQQQ AELASLRGEK ERLRRLLGRQ SGALAGLERS LRAASSNSSL 251 300 ENSP00000371347/1-503 LQDQQHSLRQ LLVLLRHLVQ ERANASAPAF IMAGEQVFQD CAEIQRSGAS ENSBTAP00000029073/1-498 LQRQQH---Q LLESVQRLV- -RVMAQGPAS MRAADQLFQD CAEIQRFGAN BACU015611/1-539 LQRQQS---Q LLESVQRLV- -RVVAQGPVS MRAAEQVFQD CAEIQRSGAN bmy_08913T0/1-389 LQRQQS---Q LLESVQRLV- -RVVAQGPAS MRAAEQVFQD CAEIQRSGAN ENSTTRP00000009156/1-498 LQRQQS---Q LLESVQRLV- -RVVAQGPAS MRAAEQVFQD CAEIQRSGAN 301 350 ENSP00000371347/1-503 ASGVYTIQVS NATKPRKVFC DLQSSGGRWT LIQRRENGTV NFQRNWKDYK ENSBTAP00000029073/1-498 ASGIYTIHVA NVTEPRKVFC DMEASGGGWT LIQRRENGSV NFQRNWKDYK BACU015611/1-539 ASGIYTIHVA NVTEPRKVFC DMEASGGGWT LIQRRENGSM NFQRNWRDYK bmy_08913T0/1-389 ASGIYTIHVA NVTEPRKVFC DMEASGGGWT LIQRRENGSM NFQRNWRDYK ENSTTRP00000009156/1-498 ASGIYTIHVA NVTEPRKVFC DMEASGGGWT LIQRRENGSM NFQRNWKDYK 351 400 ENSP00000371347/1-503 QGFGDPAGEH WLGNEVVHQL TRRAAYSLRV ELQDWEGHEA YAQYEHFHLG ENSBTAP00000029073/1-498 QGFGNPAGEH WLGNEVVHQL TSRATYSLRV ELQDWEGNEA YAQYEHFQLG BACU015611/1-539 QGFGNPAGEH WLGNEVVHQL TSRTAYSLRV ELQDWEGNEA YAQYEHFQLG bmy_08913T0/1-389 QGFGNPAGEH WLGNEVVHQL TSRAAYSLRV ELQDWEGNEA YAQYEHFQLG ENSTTRP00000009156/1-498 QGFGNPAGEH WLGNEVVHQL TSRAAYSLRV ELQDWEGNEA YAQYEHFQLG 401 450 ENSP00000371347/1-503 SENQLYRLSV VGYSGSAGRQ SSLVLQNTSF STLDSDNDHC LCKCAQVMSG ENSBTAP00000029073/1-498 SEAQLYRLSL SGYSGSAGRQ SSLVLQGTNF STRDADNDNC LCKCAQMLSG BACU015611/1-539 SEGQLYRLSL SGYSGSAGRQ SSLVLQGTNF STRDADNDNC LCKCAQMLSG bmy_08913T0/1-389 SEGQLYRLSL SGYSGSAGRQ SSLVLQGTNF STRDADNDNC LCKCAQMLSG ENSTTRP00000009156/1-498 SEGQLYRLSL SGYSGSAGRQ SSLVLQGTNF STRDADNDNC LCKCAQMLSG 451 500 ENSP00000371347/1-503 GWWFDACGLS NLNGVYYHAP DNKYKMDGIR WHYFKGPSYS LRASRMMIR- ENSBTAP00000029073/1-498 GWWFDACGLS NLNGIYYPAR HHVRKLNGIR WHYFQGPSYS LRTTRMMVR- BACU015611/1-539 GWWFDACGLS NLNGIYYPAR HHVRKLNGIR WHYFQGPSYS LRSTRMMCPS bmy_08913T0/1-389 GWWFDACGLS NLNGIYYPAR HHVRKLNGIR WHYFQGPSYS LRSTRMMVR- ENSTTRP00000009156/1-498 GWWFDACGLS NLNGIYYPAR HHVRKLNGIR WHYFQGPSYS LRSTRMMVR- 501 550 ENSP00000371347/1-503 -PLDI----- ---------- ---------- ---------- ---------- ENSBTAP00000029073/1-498 -PSGI----- ---------- ---------- ---------- ---------- BACU015611/1-539 GPSPLSLKML RKANSVALAT AASASFDGAA LLRMESGPGH IQQKCVTFLC bmy_08913T0/1-389 -PTDI----- ---------- ---------- ---------- ---------- ENSTTRP00000009156/1-498 -PTDI----- ---------- ---------- ---------- ----------