KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:45 2014 Check: 00 .. Name: ENSTTRP00000013346/1-432 Len: 658 Check: 6090 Weight: 1.00 Name: BACU015906/1-425 Len: 658 Check: 4591 Weight: 1.00 Name: bmy_03160T0/1-653 Len: 658 Check: 1085 Weight: 1.00 Name: ENSP00000379475/1-428 Len: 658 Check: 1258 Weight: 1.00 Name: ENSBTAP00000029090/1-428 Len: 658 Check: 1398 Weight: 1.00 // 1 50 ENSTTRP00000013346/1-432 MAENDVDNEL LDYEDDEVET AAGGDGAEAP AKKDVKGSYV SIHSSGFRDF BACU015906/1-425 MAENDVDNEL LDYEDDEVET AAGGDGAEAP AKKDVKGSYV SIHSSGFRDF bmy_03160T0/1-653 MAENDVDNEL LDYEDDEVET AAGGDGAEAP AKKDVKGSYV SIHSSGFRDF ENSP00000379475/1-428 MAENDVDNEL LDYEDDEVET AAGGDGAEAP AKKDVKGSYV SIHSSGFRDF ENSBTAP00000029090/1-428 MAENDVDNEL LDYEDDEVET AAGGDGAEAP AKKDVKGSYV SIHSSGFRDF 51 100 ENSTTRP00000013346/1-432 LLKPELLRAI VDCGFEHPSE ---------- ---------- --------VQ BACU015906/1-425 LLKPELLRAI VDCGFEHPSE ---------- ---------- --------VQ bmy_03160T0/1-653 LLKPELLRAI VDCGFEHPSE ERSWLDPWAR PTLVSGNLYG WSKDGWLLVQ ENSP00000379475/1-428 LLKPELLRAI VDCGFEHPSE ---------- ---------- --------VQ ENSBTAP00000029090/1-428 LLKPELLRAI VDCGFEHPSE ---------- ---------- --------VQ 101 150 ENSTTRP00000013346/1-432 HECIPQAILG MDVLCQAKSG MGKTAVFVLA TLQQLEPVTG QVSVLVMCHT BACU015906/1-425 HECIPQAILG MDVLCQAKSG MGKTAVFVLA TLQQLEPVTG QVSVLVMCHT bmy_03160T0/1-653 HECIPQAILG MDVLCQAKSG MGKTAVFVLA TLQQLEPVTG QVSVLVMCHT ENSP00000379475/1-428 HECIPQAILG MDVLCQAKSG MGKTAVFVLA TLQQLEPVTG QVSVLVMCHT ENSBTAP00000029090/1-428 HECIPQAILG MDVLCQAKSG MGKTAVFVLA TLQQLEPVTG QVSVLVMCHT 151 200 ENSTTRP00000013346/1-432 RELAFQISKE YERFSKYMPN VKVAVXXXXX XXXXXXXXXX XXXXXXXXXX BACU015906/1-425 RELAFQISKE YERFSKYMPN VKVAVFFGGL SIKKDEEVLK KN-----CPH bmy_03160T0/1-653 RELAFQISKE YERFSKYMPN VKVAVFFGGL SIKKDEEVLK KN-----CPH ENSP00000379475/1-428 RELAFQISKE YERFSKYMPN VKVAVFFGGL SIKKDEEVLK KN-----CPH ENSBTAP00000029090/1-428 RELAFQISKE YERFSKYMPS VKVAVFFGGL SIKKDEEVLK KN-----CPH 201 250 ENSTTRP00000013346/1-432 XXXXXXXXXX XLARNKSLNL KHIKHFI-DE CDKMLEQLDM RRDVQEIFRM BACU015906/1-425 IVVGTPGRIL ALARNKSLNL KHIKHFILDE CDKMLEQLDM RRDVQEIFRM bmy_03160T0/1-653 IVVGTPGRIL ALARNKSLNL KHIKHFILDE CDKMLEQLDM RRDVQEIFRM ENSP00000379475/1-428 IVVGTPGRIL ALARNKSLNL KHIKHFILDE CDKMLEQLDM RRDVQEIFRM ENSBTAP00000029090/1-428 IVVGTPGRIL ALARNKSLNL KHIKHFILDE CDKMLEQLDM RRDVQEIFRM 251 300 ENSTTRP00000013346/1-432 TPHEKQVMMF SATLSKEIRP VCRKFMQD-- ---------- ---------- BACU015906/1-425 TPHEKQVMMF SATLSKEIRP VCRKFMQD-- ---------- ---------- bmy_03160T0/1-653 TPHEKQVMMF SATLSKEIRP VCRKFMQDVN TLLPSLPPLP ARCLLPLRAL ENSP00000379475/1-428 TPHEKQVMMF SATLSKEIRP VCRKFMQD-- ---------- ---------- ENSBTAP00000029090/1-428 TPHEKQVMMF SATLSKEIRP VCRKFMQD-- ---------- ---------- 301 350 ENSTTRP00000013346/1-432 ---------- ---------- ---------- ---------- ---------- BACU015906/1-425 ---------- ---------- ---------- ---------- ---------- bmy_03160T0/1-653 FLQTPLSFKR QEGGTCPFGS DDSLKRHTEA ETVSVRVCAG ARETPEDLVG ENSP00000379475/1-428 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000029090/1-428 ---------- ---------- ---------- ---------- ---------- 351 400 ENSTTRP00000013346/1-432 ---------- ---------- ---------- ---------- ---------- BACU015906/1-425 ---------- ---------- ---------- ---------- ---------- bmy_03160T0/1-653 LTRAREGQTD GRALSKRRAN STDESAPSPP PGVGAFGTSI PESILLPTRT ENSP00000379475/1-428 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000029090/1-428 ---------- ---------- ---------- ---------- ---------- 401 450 ENSTTRP00000013346/1-432 ---------- ---------- ---------- ---------- ---------- BACU015906/1-425 ---------- ---------- ---------- ---------- ---------- bmy_03160T0/1-653 SSSHPSGTLV DVSRQQRSTV ARRGNADGTR RWMAAAEAAG NLTRKPRTKP ENSP00000379475/1-428 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000029090/1-428 ---------- ---------- ---------- ---------- ---------- 451 500 ENSTTRP00000013346/1-432 ---------- ---------- -----PMEIF VDDETKLTLH GLQQYYVKLK BACU015906/1-425 ---------- ---------- -----PMEIF VDDETKLTLH GLQQYYVKLK bmy_03160T0/1-653 ASFSVPGFFP EPKACRVPYF PPFVLPMEIF VDDETKLTLH GLQQYYVKLK ENSP00000379475/1-428 ---------- ---------- -----PMEIF VDDETKLTLH GLQQYYVKLK ENSBTAP00000029090/1-428 ---------- ---------- -----PMEIF VDDETKLTLH GLQQYYVKLK 501 550 ENSTTRP00000013346/1-432 DNEKNRKLFD LLDVLEFNQV VIFVKSVQRC IALAQLLVEQ NFPAIAIHRG BACU015906/1-425 DNEKNRKLFD LLDVLEFNQV VIFVKSVQRC IALAQLLVEQ NFPAIAIHRG bmy_03160T0/1-653 DNEKNRKLFD LLDVLEFNQV VIFVKSVQRC IALAQLLVEQ NFPAIAIHRG ENSP00000379475/1-428 DNEKNRKLFD LLDVLEFNQV VIFVKSVQRC IALAQLLVEQ NFPAIAIHRG ENSBTAP00000029090/1-428 DNEKNRKLFD LLDVLEFNQV VIFVKSVQRC IALAQLLVEQ NFPAIAIHRG 551 600 ENSTTRP00000013346/1-432 MPQEERLSRY QQFKDFQRRI LVATNLFGRG MDIERVNIAF NYDMPEDSDT BACU015906/1-425 MPQEERLSRY QQFKDFQRRI LVATNLFGRG MDIERVNIAF NYDMPEDSDT bmy_03160T0/1-653 MPQEERLSRY QQFKDFQRRI LVATNLFGRG MDIERVNIAF NYDMPEDSDT ENSP00000379475/1-428 MPQEERLSRY QQFKDFQRRI LVATNLFGRG MDIERVNIAF NYDMPEDSDT ENSBTAP00000029090/1-428 MPQEERLSRY QQFKDFQRRI LVATNLFGRG MDIERVNIAF NYDMPEDSDT 601 650 ENSTTRP00000013346/1-432 YLHRVARAGR FGTKGLAITF VSDENDAKIL NDVQDRFEVN ISELPDEIDI BACU015906/1-425 YLHRVARAGR FGTKGLAITF VSDENDAKIL NDVQDRFEVN ISELPDEIDI bmy_03160T0/1-653 YLHRVARAGR FGTKGLAITF VSDENDAKIL NDVQDRFEVN ISELPDEIDI ENSP00000379475/1-428 YLHRVARAGR FGTKGLAITF VSDENDAKIL NDVQDRFEVN ISELPDEIDI ENSBTAP00000029090/1-428 YLHRVARAGR FGTKGLAITF VSDENDAKIL NDVQDRFEVN ISELPDEIDI 651 700 ENSTTRP00000013346/1-432 SSYIEQTR BACU015906/1-425 SSYSE--- bmy_03160T0/1-653 SSYIEQTR ENSP00000379475/1-428 SSYIEQTR ENSBTAP00000029090/1-428 SSYIEQTR