KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:45 2014 Check: 00 .. Name: ENSP00000312458/1-271 Len: 311 Check: 6830 Weight: 1.00 Name: ENSBTAP00000029091/1-282 Len: 311 Check: 8254 Weight: 1.00 Name: ENSTTRP00000003744/1-217 Len: 311 Check: 3314 Weight: 1.00 Name: bmy_17335T0/1-283 Len: 311 Check: 829 Weight: 1.00 Name: BACU005022/1-311 Len: 311 Check: 9916 Weight: 1.00 // 1 50 ENSP00000312458/1-271 ---------- ---------- -------MGN GG-RSGLQQG KGNVDGVAA- ENSBTAP00000029091/1-282 ---------- ---------- -------MGT GG-QNGLRPG KGNTEGVTEG ENSTTRP00000003744/1-217 ---------- ---------- ---------- ---------- ---------- bmy_17335T0/1-283 ---------- ---------- -------MGT DG-RSGLRPG KGNTEGVTAG BACU005022/1-311 MCGGTRRTLR PPSLNLRLAV LARSCVEMGT DGRRSGFRPG KGNTEGVTAG 51 100 ENSP00000312458/1-271 ---------- TPT-AASASC QYRCIECNQE AKELYRDYNH GVLKITICKS ENSBTAP00000029091/1-282 KGKTDEVTMT SNT-DASASC QYRCIECNQE AKELYRDYNH GVLKITICKS ENSTTRP00000003744/1-217 ---------- ---------- ---------- ---------- ---KITICKS bmy_17335T0/1-283 KGKTDGVAVT PPTAAASASC QYRCIECNQE AKELYRDYSH GVLNITICKS BACU005022/1-311 KGKTNGVAVT PTTAAASASC QYRCIECNQE AKELYRDYSH GVLKITICKS 101 150 ENSP00000312458/1-271 CQKPVDKYIE YDPVIILINA ILCKAQAYRH ILFNTQINIH GKLCIFCLLC ENSBTAP00000029091/1-282 CQKPVDKYIE YDPVIILINA ILCKAQAYRH ILFNTKINMH GKLCVFCLLC ENSTTRP00000003744/1-217 CQKPVDKYIE YDPVIILINA ILCRAQAYRH ILFNTKINMH GKLCVFCLLC bmy_17335T0/1-283 CQKPVDKYIE YDPVIILINA ILCRAQAYRH ILFNTKINMH GKLCVFCLLC BACU005022/1-311 CQKPVDKYIE YDPVIILINA ILCRAQAYRH ILFNTKINMH GKLCVFCLLC 151 200 ENSP00000312458/1-271 EAYLRWWQLQ DSNQNTAPDD LIRYAKEWDF YRMFAIAALE QTAYFIGIFT ENSBTAP00000029091/1-282 EAYLRWWQLQ DSSQSIDPDD FIRYAKEWDF YRMFAIASLE QTAYFIGIFA ENSTTRP00000003744/1-217 EAYLRWWQLQ DSSRSVDPDD FIRYAKEWDF YRMFAIASLE QTAYFTGIFT bmy_17335T0/1-283 EAYLRWWQLQ DSSRSVDPDD FIRYAKEWDF YRMFAVASLE QTAYFTGIFT BACU005022/1-311 EAYLRWWQLQ DSSRSVDPDD FIRYAKEWDF YRMFAIASLE QTAYFTGIFT 201 250 ENSP00000312458/1-271 FLWVERPMTA KKKPNFILLL KALLLSSYGK LLLIPAVIWE HDYTSVCLKL ENSBTAP00000029091/1-282 FLWVERPIRA KEKLNFTLLL KALLLSSYGK LLLIPAVIWE HDYTPLCLRL ENSTTRP00000003744/1-217 FLWVERPLTA KKNPNFALLL KALLLSSYGK LLLIPAVIWE HDYTPLCLRL bmy_17335T0/1-283 FLWVERPITA KKTLNFALLL KALLLSSYGK LLLIPAVIWE HDYTPLCLRL BACU005022/1-311 FLWVERPITA KKTLNSALLL KALLLSSYGK LLLIPAVIWE HDYTPLCLRL 251 300 ENSP00000312458/1-271 IKVFVLTSNF QAIRVTLNIN RKLSFLAVLS GLLLESIMVY FFQSMEWDVG ENSBTAP00000029091/1-282 IKVFVLTSNF QAIRVTLNIN RKLAFLAILS GLLVESTMVY FFQRMEWAVG ENSTTRP00000003744/1-217 IKVFVLTSNF QAVRVTLNVN RKLSFLAILS GLLVESAMVY FLQRMAWAVG bmy_17335T0/1-283 IKIFVLTSNF QAIRVTLNVN RKLSFLAILS GLLVESAMVY FFQRMARALG BACU005022/1-311 IKVFVLTSNF QAIRVTLNVN RKLSFLAILS GLLVESAMVY FFQRVARALG 301 350 ENSP00000312458/1-271 SDYAIFKSQD F ENSBTAP00000029091/1-282 SDCAIYKSQD F ENSTTRP00000003744/1-217 SD-AIHKSQD F bmy_17335T0/1-283 SDCAIYKSED F BACU005022/1-311 SDCAIYKSQD F