KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:46 2014 Check: 00 .. Name: ENSP00000363614/1-325 Len: 325 Check: 4154 Weight: 1.00 Name: ENSBTAP00000029103/1-325 Len: 325 Check: 5495 Weight: 1.00 Name: ENSTTRP00000015291/1-325 Len: 325 Check: 3294 Weight: 1.00 Name: bmy_04553T0/1-325 Len: 325 Check: 4176 Weight: 1.00 Name: BACU005774/1-283 Len: 325 Check: 2978 Weight: 1.00 // 1 50 ENSP00000363614/1-325 MAAMRKALPR RLVGLASLRA VSTSSMGTLP KRVKIVEVGP RDGLQNEKNI ENSBTAP00000029103/1-325 MATVKKVLPR RLVGLATLRA VSTSSVGTFP KQVKIVEVGP RDGLQNEKNI ENSTTRP00000015291/1-325 MATVKKAPLW RLVGLASLRA VSTSSVGTFP KQVKIVEVGP RDGLQNEKNI bmy_04553T0/1-325 MATGKKALLR RLVGLASLRA VSTSSVGTFP KRVKIVEVGP RDGLQNEKNI BACU005774/1-283 MATVKKALLR RLVGSASLRA VSTSSVGTFP KRVKIVEVGP RDGLQNEKNI 51 100 ENSP00000363614/1-325 VSTPVKIKLI DMLSEAGLSV IETTSFVSPK WVPQMGDHTE VLKGIQKFPG ENSBTAP00000029103/1-325 VPTPVKIKLI DMLSEAGLPV VEATSFVSPK WVPQMADHAE VLKGIQKFPG ENSTTRP00000015291/1-325 IPTPMKIKLI DMLSEAGLPV IEATSFVSPK WVPQMADHAE VMKGIQKFPG bmy_04553T0/1-325 IPTPMKIKLI DMLSEAGLPV IEATSFVSPK WVPQMADHAE VMKGIQKFPG BACU005774/1-283 IPTPMKIRLI DMLSEAGLPV IEATSFVSPK WVPQMADHAE VMKGIQKFPG 101 150 ENSP00000363614/1-325 INYPVLTPNL KGFEAAVAAG AKEVVIFGAA SELFTKKNIN CSIEESFQRF ENSBTAP00000029103/1-325 VNYPVLTPNF KGFQAAVAAG AKEVAIFGAA SELFTKKNIN CSIDESLQRF ENSTTRP00000015291/1-325 ISYPVLTPNF KGFQAAVAAG AKEVAVFGAA SELFSKKNIN CSIDESVQRF bmy_04553T0/1-325 ISYPVLTPNF KGFQAAVAAG AKEVAVFGAA SELFSKRNVN CSIDESVRRF BACU005774/1-283 ISYPVLTPNF KGFQAAVAAG AKEVAVFGAA SELFSKRNVN CSIDESVRRF 151 200 ENSP00000363614/1-325 DAILKAAQSA NISVRGYVSC ALGCPYEGKI SPAKVAEVTK KFYSMGCYEI ENSBTAP00000029103/1-325 DEILKAARAA GISVRGYVSC VLGCPYEGKI SPAKVAEVTK KLYSMGCYEI ENSTTRP00000015291/1-325 DEILKAARAA SIPVRGYVSC VLGCPYEGKI SPAKVAEVAK KMYSVGCYEI bmy_04553T0/1-325 DEILKAARAA SIPVRGYVSC VLGCPYEGKI SPAKVAEVAK KMYSVGCYEI BACU005774/1-283 DEILKAARAA SIPVRGYVSC VLGCPYEGKI SPAKVAEVAK KMYSVGCYEI 201 250 ENSP00000363614/1-325 SLGDTIGVGT PGIMKDMLSA VMQEVPLAAL AVHCHDTYGQ ALANTLMALQ ENSBTAP00000029103/1-325 SLGDTIGVGT PGAMKDMLSA VLQEVPVTAL AVHCHDTYGQ ALANTLTALQ ENSTTRP00000015291/1-325 SLGDTIGVGT PGIMKDMLSA VMHEVPVAAL AVHCHDTYGQ ALANTLMALQ bmy_04553T0/1-325 SLGDTIGVGT PGTMKDMLSA VMHEVPVAAL AVHCHDTYGQ ALANTLMALQ BACU005774/1-283 SLGDTIGVGT PGTMKDMLSA VMHEVPVAAL AVHCHDTYGQ ALANTLMALQ 251 300 ENSP00000363614/1-325 MGVSVVDSSV AGLGGCPYAQ GASGNLATED LVYMLEGLGI HTGVNLQKLL ENSBTAP00000029103/1-325 MGVSVMDSSV AGLGGCPYAQ GASGNLATED LVYMLAGLGI HTGVNLQKLL ENSTTRP00000015291/1-325 MGVSVVDSSV AGLGGCPYAH GASGNLATED LVYMLAGLGV HTGVNLQKLL bmy_04553T0/1-325 MGVSVVDSSV AGLGGCPYAH GASGNLATED LVYMLAGLGX HTGVNLQKLL BACU005774/1-283 ---------- ---------- ---------- ---------- --GVNLQKLL 301 350 ENSP00000363614/1-325 EAGNFICQAL NRKTSSKVAQ ATCKL ENSBTAP00000029103/1-325 EAGAFICQAL NRRTNSKVAQ ATCKL ENSTTRP00000015291/1-325 EAGAFICQAL NRRTSSKVAQ ATCKL bmy_04553T0/1-325 EAGAFICQAL NRRTSSKVAQ ATCKL BACU005774/1-283 EAGAFICQAL NRRTSSKVAQ ATCKL