KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:47 2014 Check: 00 .. Name: bmy_13837T0/1-488 Len: 858 Check: 5607 Weight: 1.00 Name: ENSP00000295902/1-844 Len: 858 Check: 9196 Weight: 1.00 Name: ENSBTAP00000029105/1-858 Len: 858 Check: 2726 Weight: 1.00 Name: BACU020106/1-844 Len: 858 Check: 9640 Weight: 1.00 Name: ENSTTRP00000012927/1-844 Len: 858 Check: 9915 Weight: 1.00 // 1 50 bmy_13837T0/1-488 ---------- ---------- ---------- ---------- ---------- ENSP00000295902/1-844 ---------- ----MVTVMP LEMEKTISKL MFDFQRNSTS DDDSGCALEE ENSBTAP00000029105/1-858 RKICLHCKCP QEEHMVTAMP LAMEKTVSKL MFDFQRNSTS DDDSGCALEE BACU020106/1-844 ---------- ----MVTVMP LAMEKTVSKL MFDFQRNSTS DDDSGCALEE ENSTTRP00000012927/1-844 ---------- ----MVTVMP LAMEKTVSKL MFDFQRNSTS DDDSGCALEE 51 100 bmy_13837T0/1-488 ---------- ---------- ---------- ---------- ---------- ENSP00000295902/1-844 YAWVPPGLKP EQVHQYYSCL PEEKVPYVNS PGEKLRIKQL LHQLPPHDNE ENSBTAP00000029105/1-858 YAWVPPGLKP EQVHQYYSCL PEEKVPYVNS PGEKLRIKQL LHQLPPHDNE BACU020106/1-844 YAWVPPGLKP EQVHQYYSCL PEEKVPYVNS PGEKLRIKQL LHQLPPHDNE ENSTTRP00000012927/1-844 YAWVPPGLKP EQVHQYYSCL PEEKVPYVNS PGEKLRIKQL LHQLPPHDNE 101 150 bmy_13837T0/1-488 ---------- -MRAVVVYPS ---RVALRDG A--PVFLLLT FLFASQCGGQ ENSP00000295902/1-844 VRYCNSLDEE EKRELKLFSS QRKRENLGRG NVRPFPVTMT GAICEQCGGQ ENSBTAP00000029105/1-858 VRYCNSLDEE EKRELKLFSN QRKRENLGRG NVRPFPVTMT GAICEQCGGQ BACU020106/1-844 VRYCNSLDEE EKRELKLFSN QRKRENLGRG NVRPFPVTMT GAICEQCGGQ ENSTTRP00000012927/1-844 VRYCNSLDEE EKRELKLFSN QRKRENLGRG NVRPFPVTMT GAICEQCGGQ 151 200 bmy_13837T0/1-488 INGGDIAVFA SRAGHGVCWH PPCFICTVCN ELLVDLIYFY QDGKIYCGRH ENSP00000295902/1-844 INGGDIAVFA SRAGHGVCWH PPCFVCTVCN ELLVDLIYFY QDGKIYCGRH ENSBTAP00000029105/1-858 INGGDIAVFA SRAGHGVSWH PPCFICTVCN ELLVDLIYFY QDGKIYCGRH BACU020106/1-844 INGGDIAVFA SRAGHGVCWH PPCFICTVCN ELLVDLIYFY QDGKIYCGRH ENSTTRP00000012927/1-844 INGGDIAVFA SRAGHGVCWH PPCFICTVCN ELLVDLIYFY QDGKIYCGRH 201 250 bmy_13837T0/1-488 HAECLKPRCA ACDEIIFADE CTEAEGRHWH MKHFCCFECE TVLGGQRYIM ENSP00000295902/1-844 HAECLKPRCA ACDEIIFADE CTEAEGRHWH MKHFCCFECE TVLGGQRYIM ENSBTAP00000029105/1-858 HAECLKPRCA ACDEIIFADE CTEAEGRHWH MKHFCCFECE TVLGGQRYIM BACU020106/1-844 HAECLKPRCA ACDEIIFADE CTEAEGRHWH MKHFCCFECE TVLGGQRYIM ENSTTRP00000012927/1-844 HAECLKPRCA ACDEIIFADE CTEAEGRHWH MKHFCCFECE TVLGGQRYIM 251 300 bmy_13837T0/1-488 KEGRPYCCHC FESLYAEYCD TCAQHIGIDQ GQMTYDGQHW HATETCFCCA ENSP00000295902/1-844 KEGRPYCCHC FESLYAEYCD TCAQHIGIDQ GQMTYDGQHW HATETCFCCA ENSBTAP00000029105/1-858 KEGRPYCCHC FESLYAEYCD TCAQHIGIDQ GQMTYDGQHW HATETCFCCA BACU020106/1-844 KEGRPYCCHC FESLYAEYCD TCAQHIGIDQ GQMTYDGQHW HATETCFCCA ENSTTRP00000012927/1-844 KEGRPYCCHC FESLYAEYCD TCAQHIGIDQ GQMTYDGQHW HATETCFCCA 301 350 bmy_13837T0/1-488 HCKKSLLGRP FLPKQGQIFC SRACSAGEDP NGSDSSDSAF QNARAKESRR ENSP00000295902/1-844 HCKKSLLGRP FLPKQGQIFC SRACSAGEDP NGSDSSDSAF QNARAKESRR ENSBTAP00000029105/1-858 HCKKSLLGRP FLPKQGQIFC SRACSAGEDP NGSDSSDSAF QNARAKESRR BACU020106/1-844 HCKKSLLGRP FLPKQGQIFC SRACSAGEDP NGSDSSDSAF QNARAKESRR ENSTTRP00000012927/1-844 HCKKSLLGRP FLPKQGQIFC SRACSAGEDP NGSDSSDSAF QNARAKESRR 351 400 bmy_13837T0/1-488 SAKIGKNKGK TEEPMLNQHS QLQVSSNRLS ADVDPLSLQM DLLSLSSQTP ENSP00000295902/1-844 SAKIGKNKGK TEEPMLNQHS QLQVSSNRLS ADVDPLSLQM DMLSLSSQTP ENSBTAP00000029105/1-858 SAKIGKNKGK TEEPLLNQHS QLQVSSNRLS ADVDPLSLQM DLLSLSSQTP BACU020106/1-844 SAKIGKNKGK TEEPMLNQHS QLQVSSNRLS ADVDPLSLQM DLLSLSSQTP ENSTTRP00000012927/1-844 SAKIGKNKGK TEEPMLSQHS QLQVSSNRLS ADVDPLSLQM DLLSLSSQTP 401 450 bmy_13837T0/1-488 SLNRDPIWRS RDEPYHYGNK MEQSQSQSPL QLLSQCNIRT SYSPGGQGAG ENSP00000295902/1-844 SLNRDPIWRS REEPYHYGNK MEQNQTQSPL QLLSQCNIRT SYSPGGQGAG ENSBTAP00000029105/1-858 SLNRDPIWRS RDEPYHYGNK LEQSQPQSPL QLLSQCNIRT SYSPGGQGAG BACU020106/1-844 SLNRDPIWRS RDEPYHYGNK MEQSQSQSPL QLLSQCNIRT SYSPGGQGAG ENSTTRP00000012927/1-844 SLNRDPIWRS RDEPYHYGNK MEQNQSQSPL QLLSQCNIRT SYSPGGQGAG 451 500 bmy_13837T0/1-488 AQPDMWAKHF SNPKRSSSLA MKGHGGSFIK ECREDYYPGR LRSQESYSDM ENSP00000295902/1-844 AQPEMWGKHF SNPKRSSSLA MTGHAGSFIK ECREDYYPGR LRSQESYSDM ENSBTAP00000029105/1-858 AQTDVWAKHF GNPKRSSSLA MKGHGGSFIK ECREDYYPGR LRSQESYSDM BACU020106/1-844 AQPDMWAKHF SNPKRSSSLA MKGHGGSFIK ECREDYYPGR LRSQESYSDM ENSTTRP00000012927/1-844 AQPDMWPKHF SNPKRSSSLA MKGHGGSFIK ECREDYYPGR LRSQESYSDM 501 550 bmy_13837T0/1-488 SSQSFSENRG SIQVPKYEEE EEEEGGMSTQ QCRTRHPISS LKYTEDMTPT ENSP00000295902/1-844 SSQSFSETRG SIQVPKYEEE EEEEGGLSTQ QCRTRHPISS LKYTEDMTPT ENSBTAP00000029105/1-858 SSQSFSETRG GIPVPKYEEE EEEEGGLSAQ QCRTRHPISS LKYTEDMTPT BACU020106/1-844 SSQSFSENRG SIQVPKYEEE EEEEGGMSTQ QCRTRHPISS LKYTEDMTPT ENSTTRP00000012927/1-844 SSQSFSENRG SIQVPKYEEE MEEEGGMSTQ QCRTRHPISS LKYTEDMTPT 551 600 bmy_13837T0/1-488 EQTPRGSMES LALSNTTG-- ---------- --KFCLP--- ---------- ENSP00000295902/1-844 EQTPRGSMES LALSNATGLS ADGGAKRQEH LSRFSMPDLS KDSGMNVSEK ENSBTAP00000029105/1-858 EQTPRGSMES LALSNATGLS ADGGAKRQEH LSRFSMPDLS KDSGMNVSEK BACU020106/1-844 EQTPRGSMES LALSNTTGLS ADGGAKRQEH LSRFSMPDLS KDSGMNVSEK ENSTTRP00000012927/1-844 EQTPRGSMES LALSNTTGLS ADGGAKRQEH LSRFSMPDLS KDSGMNVSEK 601 650 bmy_13837T0/1-488 ---------- ---------- ---------- ---------- ---------- ENSP00000295902/1-844 LSNMGTLNSS MQFRSAESVR SLLSAQQYQE MEGNLHQLSN PIGYRDLQSH ENSBTAP00000029105/1-858 LSNMGTLNSS MQFRSAESVR SLLSAQQYQE MEGNLHPLST PIRYRDLQAH BACU020106/1-844 LSNMGTLNSS MQFRSAESVR SLLSAQQYQE MEGNLHPLSN PIRYRDLQAH ENSTTRP00000012927/1-844 LSNMGTLNSS MQFRSAESVR SLLSAQQYQE MEGNLHPLGN PIRYRDLQAH 651 700 bmy_13837T0/1-488 ---------- ---------- ---------- ------GTQR TDSR------ ENSP00000295902/1-844 GRMHQSFDFD GGMAGSKLPG QEGVRIQPMS ERTRRRATSR DDNRRFRPHR ENSBTAP00000029105/1-858 GRMHQSFDFD GGMAGSKLPG AEGVRIQPMS ERTRRRASSR EDNRRFRPHR BACU020106/1-844 GRMHQSFDFD GGMAGSKLPG PEGVRMQPMS ERTRRRATSR EDNRRFRPHR ENSTTRP00000012927/1-844 GRMHQSFDFD GGMAGSKLPG PEGVRIQPMS ERTRRRATSR EDNRRFRPHR 701 750 bmy_13837T0/1-488 ---------- ---------- ---------- ---------- ---------- ENSP00000295902/1-844 SRRSRRSRSD NALHLASERE AISRLKDRPP LRAREDYDQF MRQRSFQESM ENSBTAP00000029105/1-858 SRRSRRSRSD NALHLAGERE ALSQLKERPP LRAREDYDQF VRQRSFQESL BACU020106/1-844 SRRSRRSRSD NALHLASERE AISQLKERPP LRAREDYDQF MRQRSFQESL ENSTTRP00000012927/1-844 SRRSRRSRSD NALHLASERE AISQLKERPP LRAREDYDQF MRQRSFQESL 751 800 bmy_13837T0/1-488 ---------- ---------- ---------- ---------- ---------- ENSP00000295902/1-844 GHGSRRDLYG QCPRTVSDLA LQNAFGDRWG PYFAEYDWCS TCSSSSESDN ENSBTAP00000029105/1-858 GQGSRRDLYG RCPRTVSDLA LQNAFGERWG PYFAEYDWCS TCSSSSESDN BACU020106/1-844 GQGSRRDLYG RCPRTVSDLA LQNAFGERWG PYFTEYDWCS TCSSSSESDN ENSTTRP00000012927/1-844 GQGSRRDLYG RCPRTVSDLA LQNAFGERWG PYFTEYDWCS TCSSSSESDN 801 850 bmy_13837T0/1-488 -----GDLMP VL-------- ---------- ---------- --KIFAKRRR ENSP00000295902/1-844 EGYFLGEPIP QPARLRYVTS DELLHKYSSY GLPKSSTLGG RGQLHSRKRQ ENSBTAP00000029105/1-858 EGYFLGEPIP QPAHLRYVTS DELLHKYSSY GLPKSSTLGG RGQLHSRKRQ BACU020106/1-844 EGYFLGEPIP QPAHLRYVTS DELLHKYSSY GLPKSSTLGG RGQLHSRKRQ ENSTTRP00000012927/1-844 EGYFLGEPIP QPAHLRYVTS DELLHKYSSY GLPKSSTLGG RGQLHSRKRQ 851 900 bmy_13837T0/1-488 KHQCEALK ENSP00000295902/1-844 KSKNCIIS ENSBTAP00000029105/1-858 KSKNCIIS BACU020106/1-844 KSKNCIIS ENSTTRP00000012927/1-844 KSKNCIIS