KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:48 2014 Check: 00 .. Name: ENSTTRP00000004830/1-795 Len: 851 Check: 2948 Weight: 1.00 Name: ENSP00000350071/1-797 Len: 851 Check: 8053 Weight: 1.00 Name: bmy_17802T0/1-644 Len: 851 Check: 5468 Weight: 1.00 Name: BACU008695/1-678 Len: 851 Check: 94 Weight: 1.00 Name: ENSBTAP00000029119/1-797 Len: 851 Check: 856 Weight: 1.00 // 1 50 ENSTTRP00000004830/1-795 MDELAGGGGG GPGMAAPARQ QQGPGGNMSL SPGGNGTAGG GGAPAPEGVG ENSP00000350071/1-797 MDELAGGGGG GPGMAAPPRQ QQGPGGNLGL SPGGNGAAGG GGPPASEGAG bmy_17802T0/1-644 ---------- ---------- ---------- ---------- ---------- BACU008695/1-678 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000029119/1-797 MDELAGGGGG GPAMASPPRQ QQGPGGNMSL SPGGNGAAGG GGPPATEGAG 51 100 ENSTTRP00000004830/1-795 PAASP-LSRP QQYTFPGILH YIXXXXXXXX XXXXXXXXXX XXXXARIAFL ENSP00000350071/1-797 PAAGPELSRP QQYTIPGILH YIQHEWARFE MERAHWEVER AELQARIAFL bmy_17802T0/1-644 ---------- ---------- ---------- ---------- ---------- BACU008695/1-678 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000029119/1-797 PAAGPELSRP QQYTIPGILH YIQHEWARFE MERAHWEVER AELQARIAFL 101 150 ENSTTRP00000004830/1-795 QGERKGQENL KKDLVRRIKM LEYALKQERA KYHKLKYGTE LNQGDLKMPT ENSP00000350071/1-797 QGERKGQENL KKDLVRRIKM LEYALKQERA KYHKLKYGTE LNQGDLKMPT bmy_17802T0/1-644 ---------- ---------M LEYALKQERA KYHKLKYGTE LNQGDLKMPT BACU008695/1-678 ---------- ---------M LEYALKQERA KYHKLKYGTE LNQGDLKMPT ENSBTAP00000029119/1-797 QGERKGQENL KKDLVRRIKM LEYALKQERA KYHKLKYGTE LNQGDLKMPT 151 200 ENSTTRP00000004830/1-795 FESEETKDTE APTAPQNSQL TWKQGRQLLR QYLQEVGYTD TILDVRSQRV ENSP00000350071/1-797 FESEETKDTE APTAPQNSQL TWKQGRQLLR QYLQEVGYTD TILDVRSQRV bmy_17802T0/1-644 FESEETKDTE APTAPQNSQL TWKQGRQLLR QYLQEVGYTD TILDVRSQRV BACU008695/1-678 FESEETKDTE APTAPQNSQL TWKQGRQLLR QYLQEVGYTD TILDVRSQRV ENSBTAP00000029119/1-797 FESEETKDTE APTAPQNSQL TWKQGRQLLR QYLQEVGYTD TILDVRSQRV 201 250 ENSTTRP00000004830/1-795 RSLLGLSNSE PNGSVETKNL EQILNGGESP KQKGQEIKXX XXXXXXXXXX ENSP00000350071/1-797 RSLLGLSNSE PNGSVETKNL EQILNGGESP KQKGQEIKRS SGDVLETFNF bmy_17802T0/1-644 RSLLGLSNSE RNGSVETKNL EQILNGGESP KQKGQEIKRP SGDVLETFNF BACU008695/1-678 RSLLGLSNSE PNGSVETKNL EQILNGGESP KQKGQEIKRP SGDVLETFNF ENSBTAP00000029119/1-797 RSLLGLSNSE PNGSVETKNL EQILNGGESP KQKGQEIKRT SGDVLETFNF 251 300 ENSTTRP00000004830/1-795 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXIGNEGLAA DLTDDPDTEE ENSP00000350071/1-797 LENADDSDED EENDMIEGIP EGKDKHRMNK HKIGNEGLAA DLTDDPDTEE bmy_17802T0/1-644 LENADDSDEE EENDMIEGIP EGKDKHRINK HKIGNEGLAA DLTDDPDTEE BACU008695/1-678 LENADDSDEE EENDMIEGIP EGKDKHRINK HKIGNEGLAA DLTDDPDTEE ENSBTAP00000029119/1-797 LENADDSDEE EENDMIEGIP EGKDKHRINK HKIGNEGLAA DLTDDPDTEE 301 350 ENSTTRP00000004830/1-795 ALKEFDFLVS AEDGEGAGEA RSSGDGTEW- ---------- --------DK ENSP00000350071/1-797 ALKEFDFLVT AEDGEGAGEA RSSGDGTEW- ---------- --------DK bmy_17802T0/1-644 ALKEFDFLVT AEDGEGAGEA RSSGDGTEWG KLALPTADFF SFNNMLHVDK BACU008695/1-678 ALKEFDFLVT AEDGEGAGEA RSSGDGTEW- ---------- --------DK ENSBTAP00000029119/1-797 ALKEFDFLVT AEDGEGAGEA RSSGDGTEW- ---------- --------DK 351 400 ENSTTRP00000004830/1-795 DDLSPTTEVW DVDQGLISKL KEQYKKERKG KKGVKR---- ---------- ENSP00000350071/1-797 DDLSPTAEVW DVDQGLISKL KEQYKKERKG KKGVKR---- ---------- bmy_17802T0/1-644 DDLSPTTEVW DVDQGLISKL KEQYKKERKG KKGVKSCVID QVGNHFKYVV BACU008695/1-678 DDLSPTTEVW DVDQGLISKL KEQYKKERKG KKGVKR---- ---------- ENSBTAP00000029119/1-797 DDLSPTTEVW DVDQGLISKL KEQYKKERKG KKGVKR---- ---------- 401 450 ENSTTRP00000004830/1-795 ---------- ---------- VNRTKFYDMI ADLGDDELPL IPSGFINQSR ENSP00000350071/1-797 ---------- ---------- ANRTKLYDMI ADLGDDELPH IPSGIINQSR bmy_17802T0/1-644 MAYDNVDFLY YDEKLRELMG VNRTKLYDMI ADLGDDELPL IPSGIINQSR BACU008695/1-678 ---------- ---------- VNRTKLYDLI ADLGDDELPL IPSGIINQSR ENSBTAP00000029119/1-797 ---------- ---------- VNRTKLYDTI ADLGDDELPL IPSGIINQSR 451 500 ENSTTRP00000004830/1-795 SASTR-TDHE GARAEEAEPI TFPSGGGKSF IMGSDDVLLS VLGLGDLADL ENSP00000350071/1-797 SASTRMTDHE GARAEEAEPI TFPSGGGKSF IMGSDDVLLS VLGLGDLADL bmy_17802T0/1-644 SASTR-TDHE GARAEEAEPI TFPSGGGKSF IMGSDDVLLS VLGLGDLADL BACU008695/1-678 SASTR-TDHE GARAEEAEPI TFPSGGGKSF IMGSDDVLLS VLGLGDLADL ENSBTAP00000029119/1-797 SASTRMTDHE GARAEEAEPI TFPSGGGKSF IMGSDDVLLS VLGLGDLADL 501 550 ENSTTRP00000004830/1-795 TVTNDADYSY DLPANKDAFR KTWNPKYTLR SHFDGVRALA FHPVEPVLVT ENSP00000350071/1-797 TVTNDADYSY DLPANKDAFR KTWNPKYTLR SHFDGVRALA FHPVEPVLVT bmy_17802T0/1-644 TVTNDADYSY ------DDFG ------FTLM IR-------- ---------- BACU008695/1-678 TVTNDADYSY DLPANKDAFR KTWNPKYTLR SHFDGVRALA FHPVEPVLVT ENSBTAP00000029119/1-797 TVTNDADYSY DLPANKDAFR KTWNPKYTLR SHFDGVRALA FHPVEPVLVT 551 600 ENSTTRP00000004830/1-795 ASEDHTLKLW NLQKTVPAKK -SASLDVEPI YTFRAHIGPV LSLAISSNGE ENSP00000350071/1-797 ASEDHTLKLW NLQKTVPAKK -SASLDVEPI YTFRAHIGPV LSLAISSNGE bmy_17802T0/1-644 ---------- ---------- -SASLDVEPI YTFRAHIGPV LSLAISSNGE BACU008695/1-678 ASEDHTLKLW NLQKTVPAKK QSASLDVEPI YTFRAHIGPV LSLAISSNGE ENSBTAP00000029119/1-797 ASEDHTLKLW NLQKTVPAKK -SASLDVEPI YTFRAHIGPV LSLAISSNGE 601 650 ENSTTRP00000004830/1-795 QCFSGGIDAT IQWWNMPSPN VDPYDTYEPN VLAGTLVAHT DAVWGLAYSG ENSP00000350071/1-797 QCFSGGIDAT IQWWNMPSPS VDPYDTYEPN VLAGTLVGHT DAVWGLAYSG bmy_17802T0/1-644 QCFSGGIDAT IQWWNMPSPN VDPYDTYEPN VLAGTLVAHT DAVWGLAYSG BACU008695/1-678 QCFSGGIDAT IQWWNMPSPN VDPYDTYEPN VLAGTLIAHT DAVWGLAYSG ENSBTAP00000029119/1-797 QCFSGGTDAT IQWWNMPSPN VDPYDTYEPN VLAGTLIAHT DAVWGLAYSG 651 700 ENSTTRP00000004830/1-795 IKNQLLSCSA DGTVRLWNPQ EKLPCICTYN GDKEHGIPTS VDFIGCDPAH ENSP00000350071/1-797 IKNQLLSCSA DGTVRLWNPQ EKLPCICTYN GDKKHGIPTS VDFIGCDPAH bmy_17802T0/1-644 IKNQLLSCSA DGTVRLWNPQ EKLPCICTYN GDKEHGIPTS VDFIGCDPAH BACU008695/1-678 IKNQLLSCSA DGTVRLWNPQ EKLPCICTYN GDKEHGIPTS VDFIGCDPAH ENSBTAP00000029119/1-797 IKNQLLSCSA DGTVRLWNPQ EKLPCICTYN GDKEHGIPTS VDFIGCDPAH 701 750 ENSTTRP00000004830/1-795 MVTSFNTGST VIYDLETSQS LVMLSSQIDS GLQSSNHINR VVSHPTLPVT ENSP00000350071/1-797 MVTSFNTGSA VIYDLETSQS LVILSSQVDS GLQSNNHINR VVSHPTLPVT bmy_17802T0/1-644 MVTSFNTGST VIYDLETSQS LVMLSSQIDS ---------- ---------- BACU008695/1-678 MVTSFNTGST VIYDLETSQS LVMLSSQIDS GLQSSNHINR VVSHPTLPVT ENSBTAP00000029119/1-797 MVTSFNTGST VIYDLETSQS LVMLSSQMDS GLQSSNHINR VVSHPTLPVT 751 800 ENSTTRP00000004830/1-795 ITAHEDRHIK FFDNKTGKMI HSMVAHLDAV TSLAVDPNGI YLMSGSHDCS ENSP00000350071/1-797 ITAHEDRHIK FFDNKTGKMI HSMVAHLDAV TSLAVDPNGI YLMSGSHDCS bmy_17802T0/1-644 ---------- ------GKMI HSMVAHLDAV TSLAVDPNGI YLMSGSHDCS BACU008695/1-678 ITAHEDRHIK FFDNKTGKMI HSMVAHLDAV TSLAVDPNGI YLMSGSHDCS ENSBTAP00000029119/1-797 ITAHEDRHIK FFDNKTGKMI HSMVAHLDAV TSLAVDPNGI YLMSGSHDCS 801 850 ENSTTRP00000004830/1-795 IRLWNLDSKT CVQEITAHRK KLDESIYDVA FHPSKAYIAS AGADALAKVF ENSP00000350071/1-797 IRLWNLDSKT CVQEITAHRK KLDESIYDVA FHSSKAYIAS AGADALAKVF bmy_17802T0/1-644 IRLWNLDSKT CVQEITAHRK KLDESIYDVA FHPSKAYIAS AGADALAKVF BACU008695/1-678 IRLWNLDSKT CVQEITAHRK KLDESIYDVA FHPSKAYIAS AGADALAKVF ENSBTAP00000029119/1-797 IRLWNLDSKT CVQEITAHRK KLDESIYDVA FHPSKAYIAS AGADALAKVF 851 900 ENSTTRP00000004830/1-795 V ENSP00000350071/1-797 V bmy_17802T0/1-644 V BACU008695/1-678 V ENSBTAP00000029119/1-797 V