KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:48 2014 Check: 00 .. Name: ENSP00000325485/1-392 Len: 461 Check: 9629 Weight: 1.00 Name: BACU008018/1-441 Len: 461 Check: 7208 Weight: 1.00 Name: ENSBTAP00000029121/1-381 Len: 461 Check: 2660 Weight: 1.00 Name: bmy_05763T0/1-345 Len: 461 Check: 3182 Weight: 1.00 Name: ENSTTRP00000000953/1-391 Len: 461 Check: 3722 Weight: 1.00 // 1 50 ENSP00000325485/1-392 ---------- ---------- ---------- ---------- ---------- BACU008018/1-441 MGGEEARPRR GGGLRRDGDK KGPEGGGRRS GPAPGPPPRG FRWPGRQLKL ENSBTAP00000029121/1-381 ---------- ---------- ---------- ---------- ---------- bmy_05763T0/1-345 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000953/1-391 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000325485/1-392 ---------- MATAAQGPLS LLWGWLWSER FWLPENVSWA DLEGPADGYG BACU008018/1-441 WRRWPRGGRK MATTAAGALG LLWGWLWSER FWLPQNVSWA DLEGPGDGYG ENSBTAP00000029121/1-381 ---------- MATAAAGALG LLWGWLWSER FWLPQNVSWA NFEGQGDGYG bmy_05763T0/1-345 ---------- ---------- ---NWL---- ---------- ---------- ENSTTRP00000000953/1-391 ---------- MATAVAGALG LLWGWLWSER FWLPQNVSWA DLEGPGDGYG 101 150 ENSP00000325485/1-392 YPRGRHILSV FPLAAGIFFV RLLFERFIAK PCALCIGIED SGPYQAQPNA BACU008018/1-441 YPRARHILSV FPLAAGVFSV RLLFERYIAK PCALHVGIQD SGPYQAQPNA ENSBTAP00000029121/1-381 YPRARHILSV FPLAAGVFSV RLLFERFIAK PCALHVGIQD SGPYQAQPNA bmy_05763T0/1-345 ---------- ---------L GFLHYRYIAK PCALHVGIQD SGPYQAQPNA ENSTTRP00000000953/1-391 YPRARHILSV FPLAAGVFSV RLLFERFIAK PCALHVGIQD SGPYQAQPNA 151 200 ENSP00000325485/1-392 ILEKVFISIT KYPDKKRLEG LSKQLDWNVR KIQCWFRHRR NQDKPPTLTK BACU008018/1-441 ILEKVFISVT KYPDEKRLEG LSKQLDWDVR KIQCWFRHRR NQDKPPTLTK ENSBTAP00000029121/1-381 ILEKVFMSIT KYPDEKRLEG LSKQLDWDVR KIQCWFRHRR NQDKPPTLTK bmy_05763T0/1-345 ILEKVFISVT KYPDEKRLEG LSKQLDWDVR KIQCWFRHRR NQDKPPTLTK ENSTTRP00000000953/1-391 ILEKVFISVT KYPDEKRLEG LSKQLDWDVR KIQCWFRHRR NQDKPPTLTK 201 250 ENSP00000325485/1-392 FCESMWRFTF YLCIFCYGIR FLWSSPWFWD IRQCWHNYPF QPLSSGLYHY BACU008018/1-441 FCESMWRFTF YLCIFCYGVR FLWSSPWFWD TRQCWHSYPY QPLTNGLYYY ENSBTAP00000029121/1-381 FCESMWRFTF YLCIFCYGIR FLWSSPWFWD TRQCWHSYPY QPLTSGLYYY bmy_05763T0/1-345 FCESMWRFTF YLCIFCYGVR FLWSSPWFWD TRQCWHSYPY QPLTNGLYYY ENSTTRP00000000953/1-391 FCESXXXXXX XXXXXXXXXX XXXXSPWFWD TRQCWHSYPY QPLTNGLYYY 251 300 ENSP00000325485/1-392 YIMELAFYWS LMFSQFTDIK RKDFLIMFVH HLVTIGLISF SYINNMVRVG BACU008018/1-441 YIMELAFYWS LMFSQFTDIK RKDFLIMFVH HLATIGLITF SYINNMVRVG ENSBTAP00000029121/1-381 YIMELAFYWS LMFSQFTDIK RKDFLIMFLH HLATIGLITF SYINNMVRVG bmy_05763T0/1-345 YIMELAFYWS LMFSQFTDIK RKDFLIMFVH HLATIGLITF SYINNMVRVG ENSTTRP00000000953/1-391 YIMELAFYWS LMFSQFTDIK RKDFLIMFVH HLATIGLITF SYINNMVRVG 301 350 ENSP00000325485/1-392 TLIMCLHDVS DFLLEAAKLA NYAKYQRLCD TLFVIFSAVF MVTRLGIYPF BACU008018/1-441 TLVMCLHDAS DFLLEAAKLA NYAKYQRLCD TLFVIFSAIF VVTRLGIYPF ENSBTAP00000029121/1-381 TLVLCLHDVS DFLLEAAKLA NYAKYQRLCD TLFVIFSAVF VVTRLGIYPF bmy_05763T0/1-345 TLVMCLHDAS DFLLEAAKLA NYAKYQRLCD TLFVIFSAIF VVTRLGIYPF ENSTTRP00000000953/1-391 TLVMCLHDAS DFLLEAAKLA NYAKYQRLCD TLFVIFSAIF VVTRLGIYPF 351 400 ENSP00000325485/1-392 WILNTTLFES WEIIGPYASW WLLNGLLLTL QLLHVIWSYL IARIALKALI BACU008018/1-441 WILNTTLFES WEMIGPYPSW WLFNGLLLIL QVLHVIWSYL IARIAFKALI ENSBTAP00000029121/1-381 WILNTTLFES WEIIGPYRSW WLFNGLLLVL QVLHVIWSYL IARIAFKALI bmy_05763T0/1-345 WILNTTLFES WEMIGPYPSW WLFNGLLLIL QVLHVIWSYL IARIAFKALI ENSTTRP00000000953/1-391 WILNTTLFES WEMIGPYPSW WLFNGLLLIL QVLHVIWSYL IARIAFKALI 401 450 ENSP00000325485/1-392 RGKVSKDDRS DVESSSEEED VTTCTKSPCD SSSSNGANRV NGHMGGSYW- BACU008018/1-441 RGKVTYPGRI RPRLCTLHSF LTSF------ ---------L FSMPGGSWTV ENSBTAP00000029121/1-381 RGKVTYPGRI RPRLCTLHSF LTSF------ ---------L FSMPGGSWTV bmy_05763T0/1-345 RGKVSKDDRS DVESSSEEED MTSSTKGPCG RSSSNGAGRV NGHMGGSYWL ENSTTRP00000000953/1-391 RGKVSKDDRS DVESSSEEED MTSSTKGPCG RSSSNGAGRV NGHMGGSY-- 451 500 ENSP00000325485/1-392 --------AE E BACU008018/1-441 SSL-----AC I ENSBTAP00000029121/1-381 SSL-----AC V bmy_05763T0/1-345 KSXVVGMGTS A ENSTTRP00000000953/1-391 --------AE E