KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:38:04 2014 Check: 00 .. Name: ENSBTAP00000029172/1-658 Len: 683 Check: 9710 Weight: 1.00 Name: ENSP00000390475/1-660 Len: 683 Check: 8992 Weight: 1.00 Name: ENSTTRP00000014718/1-655 Len: 683 Check: 1286 Weight: 1.00 Name: bmy_09623T0/1-667 Len: 683 Check: 86 Weight: 1.00 Name: BACU017662/1-565 Len: 683 Check: 6950 Weight: 1.00 // 1 50 ENSBTAP00000029172/1-658 ---------- ---------- -MEGDASDPE PPDAGEDSKS ENGENAPIYC ENSP00000390475/1-660 ---------- ---------- -MEGDGSDPE PPDAGEDSKS ENGENAPIYC ENSTTRP00000014718/1-655 ---------- ---------- -MEADASDPE PPDAGEDSKS ENGENAPIYC bmy_09623T0/1-667 MEASRNKGMA MFPENVWTRR RTEAEASDPE PPDAGEDSKS ENGENAPIYC BACU017662/1-565 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000029172/1-658 ICRKPDINCF MIGCDNCNEW FHGDCIRITE KMAKAIREWY CRECREKDPK ENSP00000390475/1-660 ICRKPDINCF MIGCDNCNEW FHGDCIRITE KMAKAIREWY CRECREKDPK ENSTTRP00000014718/1-655 ICRKPDINCF MIGCDNCNEW FHGDCIRITE KMAKAIREWY CRECREKDPK bmy_09623T0/1-667 ICRKPDINCF MIGCDNCNEW FHGDCIRITE KMAKAIREWY CRECREKDPK BACU017662/1-565 ---------- MIGCDNCNEW FHGDCIRITE KMAKAIREWY CRECREKDPK 101 150 ENSBTAP00000029172/1-658 LEIRYRHKKS RERDSSERDG SEPRDEGGGR KRPAPDPDLQ RRAGAGTGVG ENSP00000390475/1-660 LEIRYRHKKS RERDGNERDS SEPRDEGGGR KRPVPDPDLQ RRAGSGTGVG ENSTTRP00000014718/1-655 LEIRYRHKKS RERDSTERDG SEPRDEGGGR KRPAPDLDLQ RRAGSGTGVG bmy_09623T0/1-667 LEIRYRHKKS RERDSTERDG SEPRDEGGGR RRPAPDLDLQ RRAGSGTGVG BACU017662/1-565 LEIRYRHKKS RERDSTERDG SEPRDEGGGR RRPAPDLDLQ RRAGSGTGVG 151 200 ENSBTAP00000029172/1-658 AMLARGSASP HKSSPQPLVA TPSQHHQQQQ QQQQIKRSAR MCGECEACRR ENSP00000390475/1-660 AMLARGSASP HKSSPQPLVA TPSQHH--QQ QQQQIKRSAR MCGECEACRR ENSTTRP00000014718/1-655 AMLARGSASP HKSSPQPLVA TPSQHH---Q QQQQIKRSAR MCGECEACRR bmy_09623T0/1-667 AMLARGSASP HKSSPQPLVA TPSQHH---Q QQQQIKRSAR MCGECEACRR BACU017662/1-565 AMLARGSASP HKSSPQPLVA TPSQHH---Q QQQQIKRSAR MCGECEACRR 201 250 ENSBTAP00000029172/1-658 TEDCGHCDFC RDMKKFGGPN KIRQKCRLRQ CQLRARESYK YFPSSLSPVT ENSP00000390475/1-660 TEDCGHCDFC RDMKKFGGPN KIRQKCRLRQ CQLRARESYK YFPSSLSPVT ENSTTRP00000014718/1-655 TEDCGHCDFC RDMKKFGGPN KIRQKCRLRQ CQLRARESYK YFPSSLSPVM bmy_09623T0/1-667 TEDCGHCDFC RDMKKFGGPN KIRQKCRLRQ CQLRAR---- -----LSPVT BACU017662/1-565 TEDCGHCDFC RDMKKFGGPN KIRQKCRLRQ CQLRARESYK YFPSSLSPVT 251 300 ENSBTAP00000029172/1-658 PSESLPRPRR PLPTQPQPQP SQKLGRLRED EGAVASAAVK EPPEATATPE ENSP00000390475/1-660 PSESLPRPRR PLPTQQQPQP SQKLGRIRED EGAVASSTVK EPPEATATPE ENSTTRP00000014718/1-655 PSESLPRPRR PLPTQQQPQP SQKLGRIRED EGAVAAAAVK ELPEATATPE bmy_09623T0/1-667 PSESLPRPRR PLPTQQQPQP SQKLGRIRED EGAVASAAVK EPPEATATPE BACU017662/1-565 PSESLPRPRR PLPTQQQPQP SQKLGRIRED EGAVASAAVK EPPEATATPE 301 350 ENSBTAP00000029172/1-658 PLSDEDLPLD SELYQDFCAG AFDDHSLPWM SDTEESQFLD PALRKRAVKV ENSP00000390475/1-660 PLSDEDLPLD PDLYQDFCAG AFDDHGLPWM SDTEESPFLD PALRKRAVKV ENSTTRP00000014718/1-655 PLSDEDLPLD PDLYQDFCAG AFDDHGLPWM SDTEESPFLD PALRKRAVKV bmy_09623T0/1-667 PLSDEDLPLD PDLYQDFCAG AFDDHGLPWM SDTEESPFLD PALRKRAVKV BACU017662/1-565 PLSDEDLPLD PDLYQDFCAG AFDDHGLPWM SDTEESPFLD PALRKRAVKV 351 400 ENSBTAP00000029172/1-658 KHVKRREKKS EKK----KDE RYKRHRQKQK HKDKWKHPER ADAKDPASLP ENSP00000390475/1-660 KHVKRREKKS EKKVMERKEE RYKRHRQKQK HKDKWKHPER ADAKDPASLP ENSTTRP00000014718/1-655 KHVKRREKKS EKK----KEE RYKRHRQKQK HKDKWKHPER TDAKDPALLP bmy_09623T0/1-667 KHVKRREKKS EKK----KEE RYKRHRQKQK HKDKWKHPER ADAKDPASLP BACU017662/1-565 KHVKRREKKS EKK----KEE RYKRHRQKQK HKDKWKHPER TDAKDPASLP 401 450 ENSBTAP00000029172/1-658 QCLGPGCVRA AQPGSKYCSD DCGMKLAANR IYEILPQRIQ QWQQSPCIAE ENSP00000390475/1-660 QCLGPGCVRP AQPSSKYCSD DCGMKLAANR IYEILPQRIQ QWQQSPCIAE ENSTTRP00000014718/1-655 QCLGPGCVRA AQPGSKYCSD DCGMKLAANR IYEILPQRIQ QWQQSPCIAE bmy_09623T0/1-667 QCLGPGCVRA AQPGSKYCSD DCGMKLAANR IYEILPQRIQ QWQQSPCIAE BACU017662/1-565 QCLGPGCVRA AQPGSKYCSD DCGMKLAANR IYEILPQRIQ QWQQSPCIAE 451 500 ENSBTAP00000029172/1-658 EHGKKLLERI RREQQSARTR LQEMERRFHE LEAIILRAKQ QAVREDEESN ENSP00000390475/1-660 EHGKKLLERI RREQQSARTR LQEMERRFHE LEAIILRAKQ QAVREDEESN ENSTTRP00000014718/1-655 EHGKKLLERI RREQQSARTR LQEMERRFHE LEAIILRAKQ QAVREDEESN bmy_09623T0/1-667 EHGKKLLERI RREQQSARTR LQEMERRFHE LEAIILRAKQ QAVREDEESN BACU017662/1-565 EHGKKLLERI RREQQSARTR LQEMERRFHE LEAIILRAKQ QAVREDEESN 501 550 ENSBTAP00000029172/1-658 EGDSDDTDLQ IFCVSCGHPI NPRVALRHME RCYAKYESQT SFGSMYPTRI ENSP00000390475/1-660 EGDSDDTDLQ IFCVSCGHPI NPRVALRHME RCYAKYESQT SFGSMYPTRI ENSTTRP00000014718/1-655 EGDSDDTDLQ IFCVSCGHPI NPRVALRHME RCYAKYESQT SFGSMYPTRI bmy_09623T0/1-667 EGDSDDTDLQ IFCVSCGHPI NPRVALRHME RCYAKYESQT SFGSMYPTRI BACU017662/1-565 EGDSDDTDLQ IFCVSCGHPI NPRVALRHME RCYAKYESQT SFGSMYPTRI 551 600 ENSBTAP00000029172/1-658 EGATRLFCDV YNPQSKTYCK RLQVLCPEHS RDPKVPADEV CGCPLVRDVF ENSP00000390475/1-660 EGATRLFCDV YNPQSKTYCK RLQVLCPEHS RDPKVPADEV CGCPLVRDVF ENSTTRP00000014718/1-655 EGATRLFCDV YNPQSKTYCK RLQVLCPEHS RDPKVPADEV CGCPLVRDVF bmy_09623T0/1-667 EGATRLFCDV YNPQSKTYCK RLQVLCPEHS RDPKVPADEV CGCPLVRDVF BACU017662/1-565 EGATRLFCDV YNPQSKTYCK RLQVLCPEHS RDPK------ ---------- 601 650 ENSBTAP00000029172/1-658 ELTGDFCRLP KRQCNRHYCW EKLRRAEVDL ERVRVWYKLD ELFEQERNVR ENSP00000390475/1-660 ELTGDFCRLP KRQCNRHYCW EKLRRAEVDL ERVRVWYKLD ELFEQERNVR ENSTTRP00000014718/1-655 ELTGEFCRLP KRQCNRHYCW EKLRRAEVDL ERVRVWYKLD ELFEQERNVR bmy_09623T0/1-667 ELTGDFCRLP KRQCNRHYCW EKLRRAEVDL ERVRVWYKLD ELFEQERNVR BACU017662/1-565 ---------- ---------- ---------- -----WYKLD ELFEQERNVR 651 700 ENSBTAP00000029172/1-658 TAMTNRAGLL ALMLHQTIQH DPLTTDLRSN AER ENSP00000390475/1-660 TAMTNRAGLL ALMLHQTIQH DPLTTDLRSS ADR ENSTTRP00000014718/1-655 TAMTNRAGLL ALMLHQTIQH DPLTTDLRSS ADR bmy_09623T0/1-667 TAMTNRAGLL ALMLHQTIQH DPLTTDLRSS ADR BACU017662/1-565 TAMTNRAGLL ALMLHQTIQH DPLTTDLRSS ADR