KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:38:24 2014 Check: 00 .. Name: ENSP00000295802/1-610 Len: 681 Check: 2969 Weight: 1.00 Name: ENSBTAP00000029241/1-609 Len: 681 Check: 798 Weight: 1.00 Name: bmy_11713T0/1-481 Len: 681 Check: 5763 Weight: 1.00 Name: BACU019518/1-609 Len: 681 Check: 8833 Weight: 1.00 Name: ENSTTRP00000008499/1-610 Len: 681 Check: 549 Weight: 1.00 // 1 50 ENSP00000295802/1-610 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000029241/1-609 ---------- ---------- ---------- ---------- ---------- bmy_11713T0/1-481 MRTTLRAARD VSTTSREGQS PPETWLLAKK GLAEQWPKSV LPSGCEDKLT BACU019518/1-609 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008499/1-610 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000295802/1-610 ---------- ---------- -MWLPLVLLL AVLLLAVLCK VYLGLFSGSS ENSBTAP00000029241/1-609 ---------- ---------- -MWVSLLLLA A-LLLVVLGK VYKGLFSGSS bmy_11713T0/1-481 GQSRGRRARA QSERTGSDAS AMWLLLLPLA A-LLLAVLGK VCKGLFSGSS BACU019518/1-609 ---------- ---------- -MWLLLLPLA A-LLLAVLGK VCKGLFSGSS ENSTTRP00000008499/1-610 ---------- ---------- -MWLLLLPLA ALLLLAVLGK VCKGLFSSSS 101 150 ENSP00000295802/1-610 PNPFSEDVKR PPAPLVTDKE ARKKVLKQAF SANQVPEKLD VVVIGSGFGG ENSBTAP00000029241/1-609 PNPFLEDVQR PPAPLVTDKE ARKKVLKQAF SVSRVPKKLD VVVIGSGFGG bmy_11713T0/1-481 PNPFSEDVKR PPAPLVTDKE ARKKVLKQAF SASRVPEKLD VVVIGSGFGG BACU019518/1-609 PNPFSEDVKR PPAPLVTDKE ARKKVLKQAF SASRVPEKLD VVVIGSGFGG ENSTTRP00000008499/1-610 PNPFSEDVKR PPAPLVTDNE ARKKVLKQAF SASRVPEKLD VVVIGSGFGG 151 200 ENSP00000295802/1-610 LAAAAILAKA GKRVLVLEQH TKAGGCCHTF GKNGLEFDTG IHYIGRMEEG ENSBTAP00000029241/1-609 LAAAAILAKT GKRVLVLEQH TKAGGCCHTF GKNGLEFDTG IHYIGRMQEG bmy_11713T0/1-481 LAAAXILTKA GKRVLVLEQH TKAGGCCHTF GQDGLEFDTG IHYIGRMQEG BACU019518/1-609 LAAAAILTKA GKRVLVLEQH TKAGGCCHTF GQHGLEFDTG IHYIGRMQEG ENSTTRP00000008499/1-610 LAAAAILTKA GKRVLVLEQH TKAGGCCHTX XXXXXXXXXX IHYIGRMQEG 201 250 ENSP00000295802/1-610 SIGRFILDQI TEGQLDWAPL SSPFDIMVLE GPNGRKEYPM YSGEKAYIQG ENSBTAP00000029241/1-609 SFDRFILDQI TEGQLDWAAL SSPFDIMVLE GPDGRKEFPM YTGMKAYIQG bmy_11713T0/1-481 SFGRFILDQI TEGQLDWAPT ASPFDIMVLE GPNGRKEFPM YSGEKAYIQG BACU019518/1-609 SFGRFILDQI TEGQLDWAPT ASPFDIMVLE GPNGRKEFPM YSGEKAYIQG ENSTTRP00000008499/1-610 SFGRFILDQI TEGQLDWAPT ASPFDIMVLE GPNGRKEFPM YSGEKAYVQG 251 300 ENSP00000295802/1-610 LKEKFPQEEA IIDKYIKLVK VVSSGAPHAI LLKFLPLPVV QLLDRCGLLT ENSBTAP00000029241/1-609 LKDKFPQEEA AIDKYMKLVK VVSRGGIYAV LLKILPLPVA QLLTKYGLLT bmy_11713T0/1-481 LKEKFPQEEA AIDKYIRLVK VVSRGVIHAI LLKILPLPMV QALHKCGLLT BACU019518/1-609 LKEKFPQEEA AIDKYIRLVK VVSRGVIHAI LLKILPLPMV QALNKCGLLT ENSTTRP00000008499/1-610 LKEKFPQEEA AIDKYIRLVK VVSRGVSHAI LLKILPLLMV QVLNKYGLLT 301 350 ENSP00000295802/1-610 RFSPFLQAST QSLAEVLQQL GASSELQAVL SYIFPTYGVT PNHSAFSMHA ENSBTAP00000029241/1-609 YFSPFLRAST QSLAEVLQQL PASPELQAVL SYIFPTYGVT PSHTTFSMHA bmy_11713T0/1-481 RFSPFLHAST QSLAEVLREL PASPELQAVL SYIFPTYGVT ASHTTFAMHA BACU019518/1-609 RFSPFLHAST QSLAEVLREL PASPELQAVL SYIFPTYGVT ASRTTFAMHA ENSTTRP00000008499/1-610 HFSSFLHAST QSLAEVLREL PASPELQAVL SYIFPTYGVT ASHTTFAMHA 351 400 ENSP00000295802/1-610 LLVNHYMKGG FYPRGGSSEI AFHTIPVIQR AGGAVLTKAT VQSVLLDSAG ENSBTAP00000029241/1-609 LLVDYFLGGA FYPRGGSSEI AFHTIPVIQR AGGAVLTRAP VHSILLDSAG bmy_11713T0/1-481 LLVDHYIKGA FYPRGGSSEI AFHTIPVIQR AGGAVLTRAP VQSILLDSAG BACU019518/1-609 LLVDHYIKGA FYPRGGSSEI AFHTIPVIQR AGGAVLTRAP VQSILLDSAG ENSTTRP00000008499/1-610 LLVDHYIKGA FYPRGGSSEI AFHTIPVIQR AGGAVLTRAP VQSILLDSAG 401 450 ENSP00000295802/1-610 KACGVSVKKG HELVNIYCPI VVSNAGLFNT YEHLLPGNAR CLPGVKQQLG ENSBTAP00000029241/1-609 KACGVTVKKG EDLVNIYCPI VISDAGLFNT YEHLLPEQAR CLPGVKRQLG bmy_11713T0/1-481 KACGVTVKEG QELVNIYCPI VISNTGLFNT YEYLLPEKAR CLPG--KRLG BACU019518/1-609 KACGVTVKEG QELVNIYCPI VISNAGLFNT YEYLLPEKAR CLPGVKRQLG ENSTTRP00000008499/1-610 KACGVTVKKG QELVSIYCPV VISNAGLFNT YEYLLPEKAR CLPGVKRQLG 451 500 ENSP00000295802/1-610 TVRPGLGMTS VFICLRGTKE DLHLPSTNYY VYYDTDMDQA MERYVSMPRE ENSBTAP00000029241/1-609 MVRPGLSMFC VFICLRGTKE DLGLPTTNYY IYFDKDMDRA MEHYVSLPGD bmy_11713T0/1-481 RVTV------ ---------- -LQVPQA--- ----CPLQPA GSAWLVLP-- BACU019518/1-609 MVRPGLSMFS VFICLRGTKK DLGLPSTNYY IYFDTDMDTA MEHYLSLPAD ENSTTRP00000008499/1-610 MVRPGLSMFS VFICLRGTKK DLGLPSTNYY VYFDTDMDMA MEHYLSLPAD 501 550 ENSP00000295802/1-610 EAAEHIPLLF FAFPSAKDPT WEDRFPGRST MIMLIPTAYE WFEEWQAELK ENSBTAP00000029241/1-609 KAAAHMPLLF ISFSSAKDPT WEDRYPDRST AIILVPTSYE WFKEWRDEPQ bmy_11713T0/1-481 ------PALA LPF----DPP ---------- ---------- ---------- BACU019518/1-609 KAVEHMPVLF IAFPSAKDPT WEDRFSGRST GVVLVPTSYE WFEEWRDEPR ENSTTRP00000008499/1-610 KAVGHMPVLF ITFPSAKDPS WEDRFSGRST GVVLVPTSYE WFEEWRDEPQ 551 600 ENSP00000295802/1-610 GKRGSDYETF KNSFVEASMS VVLKLFPQLE GKVESVTAGS PLTNQFYLAA ENSBTAP00000029241/1-609 GKRSSAYENL KSSFVEAAVS VFLKQFPHLE GKVDSVTGGS PLSIQFYLAA bmy_11713T0/1-481 ---------- ---------- ---------- ---------- ---------- BACU019518/1-609 GKRSSGYETL KSSFVEAALS VILKLFPQLE GKVDSVTGGS PLTSQFYLAA ENSTTRP00000008499/1-610 GKRSSGYETL KSSFVEAALS VVLKLFPQLE GKVDSVTGGS PLTNQFYLAA 601 650 ENSP00000295802/1-610 PRGACYGADH DLGRLHPCVM ASLRAQSPIP NLYLTGQDIF TCGLVGALQG ENSBTAP00000029241/1-609 PQGACYGADH DLGRLHPGAM ASIRAQSPIP NLYLTGQDVL TCGLTGALQG bmy_11713T0/1-481 ---------- ---------- ---------- ---------- ---------- BACU019518/1-609 PRGACYGADH DLGRLHPGAM ASMRAQSPIP NLYLTGQDVF TCGLMGALQG ENSTTRP00000008499/1-610 PRGACYGADH DLGRLHPGAM ASMRAQSPIP NLYLTGQDVF TCGLMGALQG 651 700 ENSP00000295802/1-610 ALLCSSAILK RNLYSDLKNL DSRIRAQKKK N ENSBTAP00000029241/1-609 ALLCSSAILK RNLYLDLWKL GSRIQARKKK N bmy_11713T0/1-481 ---------- ---------- ---------- - BACU019518/1-609 ALLCSSAILK RNLYSDLQKL GARVQAQKKK N ENSTTRP00000008499/1-610 ALLCSSAILK RNLYSNLQKL GSRVQAQKKK N