KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:38:25 2014 Check: 00 .. Name: ENSP00000299238/1-775 Len: 803 Check: 7049 Weight: 1.00 Name: ENSBTAP00000029250/1-801 Len: 803 Check: 4995 Weight: 1.00 Name: bmy_12660T0/1-803 Len: 803 Check: 118 Weight: 1.00 Name: BACU012376/1-803 Len: 803 Check: 852 Weight: 1.00 // 1 50 ENSP00000299238/1-775 MKRSGTLRLL SDLSAFGGAA RLRELVAGDS AVRVRGSPDG RHLLLLRPPG ENSBTAP00000029250/1-801 MKRAGTLRLL SDLSTFSGAA RLRELLAGDP AVRVRCSPDG RHLLLLRPPG bmy_12660T0/1-803 MKRAGTLRLL SDLNNFSGAA RLRELLAGDP AVRVRCSPDG RHLLLLRPPG BACU012376/1-803 MKRAGTLRLL SDLNNFSGAA RLRELLAGDP AVRVRCSPDG RHLLLLRPPG 51 100 ENSP00000299238/1-775 AVAPQLLVAS RGPGAELERA WPAGQPSPLD AFFLPWPARP ALVLVWESGL ENSBTAP00000029250/1-801 SPAPQLLVAV RGPGEELESA WPPGQPSPLD AFLLPWRARS ALVLVWESGL bmy_12660T0/1-803 APDPQLLVAV RGPGAELERA WPAGQPSPLD AFFLPWPARP ALVLVWESGL BACU012376/1-803 APDPQLLVAV RGPGAELERA WPAGQPSPLD AFFLPWPARP ALVLVWESGL 101 150 ENSP00000299238/1-775 AEVWGAGVGP GWRPLQSTEL CPGGGARVVA VAALRGRLVW CEERQARAEG ENSBTAP00000029250/1-801 LEVWGSGVGP GWRLLQSTEL CPGGGARVVA AAAPRGRLVW CEERPAGTEG bmy_12660T0/1-803 AEVWGAGVGP GWRLLQSTEL CPGGGARVVA VAAPRGRLVW CEERQAGAEG BACU012376/1-803 AEVWGAGVGP GWRLLQSTEL CPGGGARVVA VAAPRGRLVW CEERQAGAEG 151 200 ENSP00000299238/1-775 PSGSPAAAFS HCVCVRTLEP SGEASTSLGR THVLLHHCPA FGLLASCRQL ENSBTAP00000029250/1-801 QLGPPAVAFS HCVCVRTLEP SGEAGTNLGS THILLHHCPA FGLLTSRKDL bmy_12660T0/1-803 REGPPAVAFS HCVCVRTLEP SGEAGTNLGR THILLHNCPP FGLLTSRKDL BACU012376/1-803 REGPPAVAFS HCVCVRTLEP SGEAGTNLGR THILLHNCPP FGLLTSRKDL 201 250 ENSP00000299238/1-775 FLVPTATTWP GVAHVLLIWS PGKGKVMVAA PRLGLSYSKS LNPGRGDTWD ENSBTAP00000029250/1-801 FLVPTATTWP GLGHILLIWS PSKGKVVVAA PCLGLSHSKS LNPGRGDTWD bmy_12660T0/1-803 FLVPTATTWP GVGHILLIWS PRKGKVVVAA PCLGLSHSKS LNPGGGDPWD BACU012376/1-803 FLVPTATTWP GVGHILLIWS PSKGKVVVAA PCLGLSHSKS LNPGGGDPWD 251 300 ENSP00000299238/1-775 FRTLLRGLPG LLSPREPLAV HTWAPTPQGL LLLDFGGTVS LLQSHGGTRA ENSBTAP00000029250/1-801 FRTLLRGLPG LLSPRQPLTV HTWAPTPQGL MWLDFRGTVS LVQPHGGSRT bmy_12660T0/1-803 FRTLLRGLPG LLSPRQPLTV HTWAPTPQGL LWLDFRGTVS LVQPHGGTRA BACU012376/1-803 FSTLLRGLPG LLSPRQPLTV HTWAPTPQGL LWLDFRGTVS LVQPHGGTRA 301 350 ENSP00000299238/1-775 VGTLQEAPVG PWGSAALGTF QGTLACVLGS TLELLDMGSG QLLERKVLST ENSBTAP00000029250/1-801 VGTLQEAPAS LAGSAALGTF HGTLACVLGS TLELLDMGSG QLLERKILST bmy_12660T0/1-803 VGTLQEAPAS LAGSAALGTF HGTLACVLGS TLELLDMGSG QLLERKVLST BACU012376/1-803 VGTLQEAPAS LAGSAALGTF HGTLACVLGS TLELLDMGSG QLLERKVLST 351 400 ENSP00000299238/1-775 DRVHLLEPPA PGMEDEEELE TRGNLRLLSA LGLFCVGWEA PQGVELPSAK ENSBTAP00000029250/1-801 DRVHLLEPPA PGMEDQEELE TRGGLRLLSA VGLFQVGWKT PQSLELPSAE bmy_12660T0/1-803 DRVHLLEPPA PGMENEEELE TQGGLRLLSA VGLFRVGWEA PQGLELPSAE BACU012376/1-803 DRVHLLEPPA PGMENEEELE TRGGLRLLSA VGLFRVGWEA PQGLELPSAE 401 450 ENSP00000299238/1-775 DLVFEEACGY YQRRSLRGAQ LTPEELRHSS TFRAPQALAS ILQGHLPPSA ENSBTAP00000029250/1-801 DMVFEEACKY YQRRSLRGAQ LTPEELRHNS IFRAPQALAS ILQGHVSPSA bmy_12660T0/1-803 DLVFEEACEY YQRRSLRGAR LTPEELRHNS TFRAPQALAS ILQGHVSPST BACU012376/1-803 DLVFEEACEY YQRRSLRGAR LTPEELRHNS TFRAPQALAS ILQGHVSPST 451 500 ENSP00000299238/1-775 LLTMLRTELR DYRGLEQLKA QLVAGDDEEA GWTELAEQEV ARLLRTELIG ENSBTAP00000029250/1-801 LLTTLRAELR DYRGLEQLKA QLVAGDEEEA GWTELAEHEV ARLLRTDLMG bmy_12660T0/1-803 LLTTLRAELR DYRGLEQLKA QLVAGDDEEA GWTELAEHEV ARLLRTELMG BACU012376/1-803 LLTTLRAELR DYRGLEQLKA QLVAGDDEEA GWTELAEHEV ARLLRTELMG 501 550 ENSP00000299238/1-775 DQLAQLNTVF QALPTAAWGA TLRALQLQLD GNGKLRSQAP PDVWKKVLGG ENSBTAP00000029250/1-801 DQLAQLNTIF QALPTAAWGA ILRVLQLQPD GNGHLRSQAP PDVWKKVLGV bmy_12660T0/1-803 DQLAQLNTIF QALPTAAWGA ILRALQLQPD GNGRLRSQAP PDVWKKVLGV BACU012376/1-803 DQLAQLNTVF QALPTAAWGA ILRALQLQPD GNGRLRSQAP PDVWKKVLGV 551 600 ENSP00000299238/1-775 ITAGKEPPNG ILPPFELLCQ CLCQLEPRWL PPFVELAQQQ GGPGWGAGGP ENSBTAP00000029250/1-801 TAAGKEPPNG ILPPFELLCQ CLCRLEPQWL PPFVELAQQQ GGPGWGAGGP bmy_12660T0/1-803 TTCGKEPPSG ILPLFELLCR CLCRLEPRWL PPFVELAQQQ GGPGWGSGGP BACU012376/1-803 TTCGKEPPSG ILPLFELLCR CLCRLEPRWL PPFVELAQQQ GGPGWGSGGP 601 650 ENSP00000299238/1-775 GLPLYRRALA VLGEEGTRPE ALELELLLSS GRPKAVLQAV GQLVQKEQWD ENSBTAP00000029250/1-801 GLPLYRRALA VLGEEGTRPE ALELDLLLGS GRPKAVLQAV GQLVQKEQWE bmy_12660T0/1-803 GLPLYRRALE VLGEEGTRPE ALELDLLLGS GRPKAVLQAV GQLVQKEEWE BACU012376/1-803 GLPLYRRALE VLGEEGTRPE ALELDLLLGS GRPKAVLQAV GQLVQKEEWE 651 700 ENSP00000299238/1-775 RALDAGLALG PSSPLLRSEI FKLLLAEFAQ HRRLDAHLPL LCRLCPPELA ENSBTAP00000029250/1-801 RALEAGLALS PSSPLLRSEI FKLLLAEFAR HRRLDAHLPL LCRLCPPDLA bmy_12660T0/1-803 RALEAGLALS PSSPLLRSEI FKLLLAEFAR HRRLDAHLPL LCRLCPPDLA BACU012376/1-803 RALEAGLALS PSSPLLRSEI FKLLLAEFAR HRRLDAHLPL LCRLCPPDLA 701 750 ENSP00000299238/1-775 PAELLLLLRT YLPDEVGPPT PFPEPGAEPP LTVGLLKALL EQTGAQGWLS ENSBTAP00000029250/1-801 PAELLLLLRT YLPDELEPPA PFPEPGAEPP LTVGLLRALL KQTGTQGRAS bmy_12660T0/1-803 PAELLLLLRT HLPDELEPPA PFPEPGAEPP LTVGLLRALL EQTGTQGRPS BACU012376/1-803 PAELLLLLRT HLPDELEPPA PFPEPGAEPP LTVGLLRALL EQTGTEGRPS 751 800 ENSP00000299238/1-775 GPVLSPYEDI LWDPSTPPPT PPRDL----- ---------- ---------- ENSBTAP00000029250/1-801 GPVLSLYEDI LWDPDTPPPT PPR--VSALQ ASDHPGLEAW APSGQGLYVT bmy_12660T0/1-803 GPVLSRYEDI LWDPGTPPPT PPRGPMSALQ ASDHPGLEAW APSGQGLCVT BACU012376/1-803 GPVLSRYEDI LWDPGTPPPT PPRGPMSALQ ASDHPGLEAW APSGQGLCVT 801 850 ENSP00000299238/1-775 --- ENSBTAP00000029250/1-801 DTG bmy_12660T0/1-803 DTG BACU012376/1-803 DTG