KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:38:30 2014 Check: 00 .. Name: ENSP00000370781/1-519 Len: 757 Check: 3290 Weight: 1.00 Name: ENSTTRP00000008216/1-519 Len: 757 Check: 5365 Weight: 1.00 Name: bmy_19655T0/1-698 Len: 757 Check: 3444 Weight: 1.00 Name: ENSBTAP00000029276/1-440 Len: 757 Check: 7142 Weight: 1.00 Name: BACU016748/1-79 Len: 757 Check: 8846 Weight: 1.00 // 1 50 ENSP00000370781/1-519 MEWKLERTAP RRVRTEEEML WESIMRVLSK DLKQKRSQDS ANVLDSVNAT ENSTTRP00000008216/1-519 MEWKLERTAR RRVRTEEEIL WEEVMRVLAK DMKQKRAQDS PKXXXXXXXX bmy_19655T0/1-698 MDPKQHCSQQ QRPRAPDFSF SGEGALFGA- ---------- --VFDAVNPT ENSBTAP00000029276/1-440 ---------- ---------- ---------- ---------- --VFNVVNTT BACU016748/1-79 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000370781/1-519 YSDFKSNFAK RLSAEVPVAS SPITTRWQQS QTRALSSDSF GEEQSTTYLP ENSTTRP00000008216/1-519 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_19655T0/1-698 YSNFKSNFAK RLSAEVPVAS SPITTRWRQS QTRDVAAHSF GEEHSTTDLP ENSBTAP00000029276/1-440 YSNFTSNLAK RLSAEVPVAS SPITTRWRQS QAGDVTALSF GEEHSTADLP BACU016748/1-79 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000370781/1-519 EASGSVLKTP PEKETLTLGS RKEQLKTPSK GISETSNSAL HFCKAPHAMD ENSTTRP00000008216/1-519 XXXXXXXXXX XXXXXXXXXS YKEPLKTPNK GSFETNSSAL HFCKAPHALD bmy_19655T0/1-698 E---TVLKIT PEKETLIPGE -----KSPGA G--------- ---------- ENSBTAP00000029276/1-440 E---TVLKMT PEKETLTPGS YKEPLKTPNK GSSGTNNSAF QFGKAPHALN BACU016748/1-79 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000370781/1-519 RDWKESVASK GQKCLKQLFV TQNVVQQANG KMQLCEQSEC VWKGCKDGVR ENSTTRP00000008216/1-519 GGKRKTVASK GQKCLNQLLS TQKVAQQINE KMQLCEQSQC IWKGCSDGVR bmy_19655T0/1-698 -GRGGLKQNQ KKKCLNQLLS TQKVAQQVNG KMQLCEQSQC IWKGCSDGVR ENSBTAP00000029276/1-440 RGWKDKVASK DPKCLNQLFS TQNVAQQVNG SMQFCERSQC TWKGCRDGVR BACU016748/1-79 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000370781/1-519 DESFHLKSSG DINDSILQPE VKIHITGLRN DYYLNILDWS FQNLVAIALG ENSTTRP00000008216/1-519 DEYFHIQRFS DINYSILQPE VKXXXXXXXX XXXLNILDWN LHNLVAIALG bmy_19655T0/1-698 DEYFHIQRFS DINYSILQPE VKIHLTALRN DYYLNILDWN FQNLVAIALG ENSBTAP00000029276/1-440 DGYF--QRFS DINYSILQPE VKIHLTGLRN DYYLNILDWN FQNLIAIALG BACU016748/1-79 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000370781/1-519 SAVYIWNGEN HNGIENIDLS LTCNYISSVS WIKEGTCLAV GTSEGEVQLW ENSTTRP00000008216/1-519 SSVYIWNGDN HNRIENIDLS VTCNYISSVS WTKEGTCLAV GTSEGEVQLW bmy_19655T0/1-698 SSVYIWNGDN HNRIENIDLS VTCNYISSVS WTKEGTCLAV GTSEGEVQLW ENSBTAP00000029276/1-440 SSVYVWNGDN HNRIENMYFS LPCNYVSSVS WMTEGTCLAV GTSEGEIQLW BACU016748/1-79 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000370781/1-519 DVVTKKRLRN MLGHLSVVGA LSWNHFILSS GSRLGRVYHH DVRVAQHHVG ENSTTRP00000008216/1-519 DVVTKKRQRN MLGHLSVVGA LSWNNYILSS GSRLGRVYHH DVRVAQHHVG bmy_19655T0/1-698 DVVTKKRLRN MLGHLSVVGA LSWNSYILSS GSRLGLVYHH DVRVAQHHVG ENSBTAP00000029276/1-440 DLVTKKRLRN MLGHLSVVGA LSWNHYILSS GSRLGRVYHH DVRVAQHHVG BACU016748/1-79 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000370781/1-519 TLRHKQAVCA LKWSPDGRLL SSGCSDGLLT IWPHDPGASA QGQPLKVITQ ENSTTRP00000008216/1-519 ILHHKQAVCA LKWSPGGRLL SSGCSDGLLT IWPHDPGVNA QGHPLNVIPQ bmy_19655T0/1-698 TLHHKQAVCA LKWSPGGRLL SSGCSDGLLT IWPHDPG--- ---------- ENSBTAP00000029276/1-440 TLQHTQAVCG LKWAPGGRLL SSGCSDGLLT IWPYDPGANA QGPPLKVIHQ BACU016748/1-79 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000370781/1-519 STAVKAMDWC PWQSGVLAIG GGMKDGRLHI LDINAGKSIQ TPSTNSQICS ENSTTRP00000008216/1-519 PTAVKAMDWC PWQSEILAVG GGMKDGHLHI LDINTEQSIQ TPSTNSQICS bmy_19655T0/1-698 -----AMDWC PWQSEILAVG GGMKDGHLHI LDINTGQSIQ TPSTKSQICS ENSBTAP00000029276/1-440 STAVKAIDWC PWQTEVLAVG GGMKDGRLHI LDISTGQSIQ TPSTDSQICS BACU016748/1-79 ---------- ---------- --MKDGHLHI LDINTGQSIQ TPSTNSQICS 451 500 ENSP00000370781/1-519 LIWLPKTKEI ATGQGTPKND VTVWTCPTVS RSGGFFGH-- ---------- ENSTTRP00000008216/1-519 LVWLPKTKEI ATGQGSPKND VTVWSCPALA RSRGFFGH-- ---------- bmy_19655T0/1-698 LIWLPKTKEI ATGQGSPKND VTVWSCPALA RSRGFFVYIL SEEKALHPPH ENSBTAP00000029276/1-440 LTWLPKTKEI ATGQGSPKND VTMWTCPGLA RSRGFFG--- ---------- BACU016748/1-79 LIWLPKTKEI ATGQGSPKND VTVWSCPALA RSRGFFV--- ---------- 501 550 ENSP00000370781/1-519 ---------- ---------- ---------- ---------- ---RGRVLHL ENSTTRP00000008216/1-519 ---------- ---------- ---------- ---------- ---RGRVLHL bmy_19655T0/1-698 LRECIYLSVS EFDCSSLITV MSSCIRVCSD DCGQFSKCVS ELWKEPAELK ENSBTAP00000029276/1-440 ---------- ---------- ---------- ---------- ---------- BACU016748/1-79 ---------- ---------- ---------- ---------- --------MS 551 600 ENSP00000370781/1-519 SLSPDQTRVF SAAADGTASV WNCY------ ---------- ---------- ENSTTRP00000008216/1-519 ALSPDQTRVF SAAADGTACV WSCC------ ---------- ---------- bmy_19655T0/1-698 CVGDKEIAIQ RFNFKALRCI FTAIVTRIST AKISKCFFVT RLFSQTPASY ENSBTAP00000029276/1-440 ---------- ---------- ---------- ---------- ---------- BACU016748/1-79 CIPDDQFVVT AF-------- ---------- ---------- ---------- 601 650 ENSP00000370781/1-519 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008216/1-519 ---------- ---------- ---------- ---------- ---------- bmy_19655T0/1-698 FCLSLDISFL RYFSGIPAPL FFCFAPSLLT CLFLPNNSIE ELRDIGLAFS ENSBTAP00000029276/1-440 ---------- ---------- ---------- ---------- ---------- BACU016748/1-79 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000370781/1-519 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008216/1-519 ---------- ---------- ---------- ---------- ---------- bmy_19655T0/1-698 MPGINYKKKF SRERSKMKET FNEISYTTIS LKSPNPQGPP HSHPLTQLQS ENSBTAP00000029276/1-440 ---------- ---------- ---------- ---------- ---------- BACU016748/1-79 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000370781/1-519 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008216/1-519 ---------- ---------- ---------- ---------- ---------- bmy_19655T0/1-698 VVIGALRKVS MCKINQRTSL GIFVSFLAVF KPQVGSTGGS VIFCKGIVKK ENSBTAP00000029276/1-440 ---------- ---------- ---------- ---------- ---------- BACU016748/1-79 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000370781/1-519 ------- ENSTTRP00000008216/1-519 ------- bmy_19655T0/1-698 KEGCFSF ENSBTAP00000029276/1-440 ------- BACU016748/1-79 -------