KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:38:31 2014 Check: 00 .. Name: ENSP00000264313/1-581 Len: 609 Check: 8642 Weight: 1.00 Name: ENSTTRP00000003077/1-609 Len: 609 Check: 2525 Weight: 1.00 Name: bmy_10813T0/1-313 Len: 609 Check: 2371 Weight: 1.00 Name: ENSBTAP00000029282/1-454 Len: 609 Check: 9903 Weight: 1.00 Name: BACU008749/1-452 Len: 609 Check: 5840 Weight: 1.00 // 1 50 ENSP00000264313/1-581 ---------- ---------- -------MED VNSNVNADQE VRKLQELVKK ENSTTRP00000003077/1-609 SEWRRRLFPP ALSLSLVAGG GRGGGAGMED INSNVNADQE VRKLQELVKK bmy_10813T0/1-313 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000029282/1-454 ---------- ---------- -------MED VNSDVNADQE VRKLQELVKM BACU008749/1-452 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000264313/1-581 LEKQNEQLRS RSGAVQGAGS LGPGSPVRAG ASIPSSGAAS PRGFPLGLSA ENSTTRP00000003077/1-609 LEKQNEQLRS RSGAVQGAGS LGPGSPVRAG ASTPSSGAAS PRGFPLGLSA bmy_10813T0/1-313 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000029282/1-454 LEKQNEQLRS RSGAVQGAGS FGPGSPVRAG ASTPSSGTAS PRGFPLGLSA BACU008749/1-452 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000264313/1-581 KSGGGPGSGP RRTSSEELRD ATSLLAAGEG GLLDEVEPLR PDELERLSGW ENSTTRP00000003077/1-609 KSGCGAGSGP RRTSSEELRD TTSLLAAGEG GLLDEVEPLR PEELERLSGW bmy_10813T0/1-313 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000029282/1-454 KSGSGAGSGP RRTSSEELRD ATSLLAAGEG GLLDEVEPLR PEELERLSGW BACU008749/1-452 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000264313/1-581 EEEEESWLYS SPKKKLTPMQ KSVSPLVWCR QVLDYPSPDV ECAKKSLIHK ENSTTRP00000003077/1-609 EEEEESWLYS SPKKKLTPMQ KSVSPLVWCR QVLDYPSPDV ECAKKSLIHK bmy_10813T0/1-313 -----MKLYS SPKKKLTPMQ KSVSPLVWCR QVLDYPSPDV ECAKKSLIHK ENSBTAP00000029282/1-454 EEEEESWLYS SPKKKLTPMQ KSVSPLVWCR QVLDYPSPDV ECAKKSLIHK BACU008749/1-452 -------LYS SPKKKLTPMQ KSVSPLVWCR QVLDYPSPDV ECAKKSLIHK 201 250 ENSP00000264313/1-581 LDQTMSALKR QNLYNNPFNS MSYTSPYSPN ASSPYSSGFN SPSSTPVRPP ENSTTRP00000003077/1-609 LDQTMSALKR QNLYNNPFNS ISYTSPYSPN ASSPYSSGFN SPSSTPVRPP bmy_10813T0/1-313 LDQTI----- ---------- --YTSPYSPN ASSPYSSGFN SPSSTPVRPP ENSBTAP00000029282/1-454 LDQTMSALKR QNLYNNPFNS VSYTSPYSPN ASSPYSSGFN SPSSTPVRPP BACU008749/1-452 LDQTMSALKR QNLYNNPFNS ISYTSPYSPN ASSPYSSGFN SPSSTPVRPP 251 300 ENSP00000264313/1-581 IVKQLILPGN SGNLK-SSDR NPPLSPQSSI DSELSASELD EDSIGSNYKL ENSTTRP00000003077/1-609 IVKQLILPGN SGNLKSSSDR NPPLSPQSSI DSELSASELD EDSIGSNYKL bmy_10813T0/1-313 IVKQLILPGN SGNLKSSSDR NPPLSPQSSI DSELSASELD EDSIGSNYKL ENSBTAP00000029282/1-454 IVKQLILPGN SGNLKSSSDR NPPLSPQSSI DSELSASELD EDSIGSNYKL BACU008749/1-452 IVKQLILPGN SGNLKSSSDR NPPLSPQSSI DSELSASELD EDSIGSNYKL 301 350 ENSP00000264313/1-581 NDVTDVQILA RMQEESLRQE YAATTSRRSS GSSCNSTRRG TFSDQELDAQ ENSTTRP00000003077/1-609 NDVTDVQILA RMQEESLRQE YAATASRRSS GSSCNSTRRG TFSDQELDAQ bmy_10813T0/1-313 NDVTDVQILA RMQEESLRQE YAATASRRSS GSSCNSTRRG TFSDQELDAQ ENSBTAP00000029282/1-454 NDVTDVQILA RMQEESLRQE YAATASRRSS GSSCNSTRRG TFSDQELDAQ BACU008749/1-452 NDVTDVQILA RMQEESLRQE YAATASRRSS GSSCNSTRRG TFSDQELDAQ 351 400 ENSP00000264313/1-581 SLDDEDDNMH HAVYPAVNRF SPSPRNSPRP SPKQSPRNSP RSRSPARGIE ENSTTRP00000003077/1-609 SLDDEDDNMH HAVYPAVNRF SPSPRNSPRP SPKQSPRNSP RSRSPARGIE bmy_10813T0/1-313 SLDDEDDNMH HAVYPAVNRF SPSPRNSPRP SPKQSPRNSP RSRSPARGIE ENSBTAP00000029282/1-454 SLDDEDDNMH HAVYPAVNRF SPSPRNSPRP SPKQSPRNSP RSRSPARGIE BACU008749/1-452 SLDDEDDNMH HAVYPAVNRF SPSPRNSPRP SPKQSPRNSP RSRSPARGIE 401 450 ENSP00000264313/1-581 YSRVSPQPMI SRLQQPRLSL QGHPTDLQTS NVKNEEKLRR SLPNLSRTSN ENSTTRP00000003077/1-609 YSRVSPQPMI SRLQQPRLSL QGHPTDLQTT SVKNEEKLRR SLPNLSRTSS bmy_10813T0/1-313 YSRVSPQPMI SRLQQPRLSL QGHPTDLQTT SVKNEEKLRR SLPNLSRTSN ENSBTAP00000029282/1-454 YSRVSPQPMI SRLQQPRLSL QGHPTDLQTT NVKNEEKLRR SLPNLSRTSN BACU008749/1-452 YSRVSPQPMI SRLQQPRLSL QGHPTDLQTT SVKNEEKLRR SLPNLSRTSN 451 500 ENSP00000264313/1-581 TQVDSVKSSR SDSNFQVPNG GIPRMQPQAS AIPSPGKFRS PAAPSPLALR ENSTTRP00000003077/1-609 TQVDSVKSSR SDSNFQVPNG GIPRMQPQAS AIPSPGKFRS PAAPSPLALR bmy_10813T0/1-313 TQVDSVKSSR SDSNFQVPNG GIPRMQPQAS AKVDN----- ---------- ENSBTAP00000029282/1-454 TQVDSVKSSR SDSNFQVPNG GIPRMQPQAS A--------- ---------- BACU008749/1-452 TQVDSVKSSR SDSNFQVPNG GIPRMQPQAS AIPSPGKFRS PAAPSPLALR 501 550 ENSP00000264313/1-581 QPVKAFSNHG SGSPGSQEIT QLTQTTSSPG PPMVQSTVSA NPPSNINSAT ENSTTRP00000003077/1-609 QPVKAFSNHG SGSPGSQETT QLMQTTSSPG PPMVQNTVPA NPPSNINSTT bmy_10813T0/1-313 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000029282/1-454 ---------- ---------- ---------- ---------- ---------- BACU008749/1-452 QPVKAFSNHG SGSPGSQETT QLMQTTSSPG PPMVQNTVPA NPPSNINSTT 551 600 ENSP00000264313/1-581 LTRPAGTTAM RSGLPRPSAP SAGGIPVPRS KLAQPVRRSL PAPKTYGSMK ENSTTRP00000003077/1-609 LTRPAGTTVX XXXXXXXXXX XXXXXXXXXX XXXXXXXXSL PAPKTYSSMK bmy_10813T0/1-313 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000029282/1-454 ---------- ---------- ---------- ---------- ---------- BACU008749/1-452 LTRPAGTTVM RSGLPRPSAP SAGGIPVPRS KLAQPVRRSL PAPKTYSSMK 601 650 ENSP00000264313/1-581 DDSWKDGCY ENSTTRP00000003077/1-609 DDSWKDGCY bmy_10813T0/1-313 --------- ENSBTAP00000029282/1-454 --------- BACU008749/1-452 DDSWKDGCY