KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:38:52 2014 Check: 00 .. Name: ENSBTAP00000029301/1-727 Len: 741 Check: 2097 Weight: 1.00 Name: ENSP00000392709/1-741 Len: 741 Check: 6785 Weight: 1.00 Name: ENSTTRP00000012116/1-727 Len: 741 Check: 3693 Weight: 1.00 Name: bmy_01682T0/1-692 Len: 741 Check: 2895 Weight: 1.00 Name: BACU014158/1-733 Len: 741 Check: 1168 Weight: 1.00 // 1 50 ENSBTAP00000029301/1-727 ---------- ----MLRIPV RKALVGLSKS SKGCVRTTAT AASNLIEVFV ENSP00000392709/1-741 MRIRGSSGTL SRINMLRIPV RKALVGLSKS PKGCVRTTAT AASNLIEVFV ENSTTRP00000012116/1-727 ---------- ----MLRIPV RRALVSLSKS PKGCVRTTAT AASNLIEVFV bmy_01682T0/1-692 ---------- ----MLRIPV RRALVSLSKS PKGCVRATAT AASNLIEVFV BACU014158/1-733 --------MK AESNMLRIPV RRALVSLSKS PKGCVRATAT AASNLIEVFV 51 100 ENSBTAP00000029301/1-727 DGQSVMVEPG TTVLQACEKV GMQIPRFCYH ERLSVAGNCR MCLVEIEKAP ENSP00000392709/1-741 DGQSVMVEPG TTVLQACEKV GMQIPRFCYH ERLSVAGNCR MCLVEIEKAP ENSTTRP00000012116/1-727 DGQSVMVEPG TTVLQACEKV GMQIPRFCYH ERLSVAGNCR MCLVEIEKAP bmy_01682T0/1-692 DGQSVMVEPG TTILQACEKV GMQIPRFCYH ERLSVAGNCR MCLVEIEKAP BACU014158/1-733 DGQSVMVEPG TTILQACEKV GMQIPRFCYH ERLSVAGNCR MCLVEIEKAP 101 150 ENSBTAP00000029301/1-727 KVVAACAMPV MKGWNILTNS EKTKKAREGV MEFLLANHPL DCPICDQGGE ENSP00000392709/1-741 KVVAACAMPV MKGWNILTNS EKSKKAREGV MEFLLANHPL DCPICDQGGE ENSTTRP00000012116/1-727 KVVAACAMPV MKGWNILTNS EKTKKAREGV MEFLLANHPL DCPICDQGGE bmy_01682T0/1-692 KVVAACAMPV MKGWNILTNS EKTKKAREGV MEFLLANHPL DCPICDQGGE BACU014158/1-733 KVVAACAMPV MKGWNILTNS EKTKKAREGV MEFLLANHPL DCPICDQGGE 151 200 ENSBTAP00000029301/1-727 CDLQDQSMMF GSDRSRFLEG KRAVEDKNIG PLVKTIMTRC IQCTRCIRFA ENSP00000392709/1-741 CDLQDQSMMF GNDRSRFLEG KRAVEDKNIG PLVKTIMTRC IQCTRCIRFA ENSTTRP00000012116/1-727 CDLQDQSMMF GSDRSRFLEG KRAVEDKNIG PLVKTIMTRC IQCTRCIRFA bmy_01682T0/1-692 CDLQDQSMMF GSDRSRFLEG KRAVEDKNIG PLVKTIMTRC IQCTRCIRFA BACU014158/1-733 CDLQDQSMMF GSDRSRFLEG KRAVEDKNIG PLVKTIMTRC IQCTRCIRFA 201 250 ENSBTAP00000029301/1-727 SEIAGVDDLG TTGRGNDMQV GTYIEKMFMS ELSGNIIDIC PVGALTSKPY ENSP00000392709/1-741 SEIAGVDDLG TTGRGNDMQV GTYIEKMFMS ELSGNIIDIC PVGALTSKPY ENSTTRP00000012116/1-727 SEIAGVDDLG TTGRGNDMQV GTYIEKMFMS ELSGNIIDIC PVGALTSKPY bmy_01682T0/1-692 SEIAGVDDLG TTGRGNDMQV GTYIEKMFMS ELSGNIIDIC PVGALTSKPY BACU014158/1-733 SEIAGVDDLG TTGRGNDMQV GTYIEKMFMS ELSGNIIDIC PVGALTSKPY 251 300 ENSBTAP00000029301/1-727 AFTARPWETR KTESIDVMDA VGSNIVVSTR TGEVMRILPR MHEDINEEWI ENSP00000392709/1-741 AFTARPWETR KTESIDVMDA VGSNIVVSTR TGEVMRILPR MHEDINEEWI ENSTTRP00000012116/1-727 AFTARPWETR KTESIDVMDA VGSNIVVSTR TGEVMRILPR MHEDINEEWI bmy_01682T0/1-692 AFTARPWETR KTESIDVMDA VGSNIVVSTR TGEVMRILPR MHEDINEEWI BACU014158/1-733 AFTARPWETR KTESIDVMDA VGSNIVVSTR TGEVMRILPR MHEDINEEWI 301 350 ENSBTAP00000029301/1-727 SDKTRFAYDG LKRQRLTEPM VRNEKGLLTH TTWEDALSRV AGMLQSFQGN ENSP00000392709/1-741 SDKTRFAYDG LKRQRLTEPM VRNEKGLLTY TSWEDALSRV AGMLQSFQGK ENSTTRP00000012116/1-727 SDKTRFAYDG LKRQRLTEPM VRNEKGLLTY TTWEDALSRV AGMLQSFQGN bmy_01682T0/1-692 SDKTRFAYDG LKRQRLTEPM VRNEKGLLTY TTWEDALSRV AGMLQSFQGB BACU014158/1-733 SDKTRFAYDG LKRQRLTEPM VRNEKGLLTY TTWEDALSRV AGMLQSFQGN 351 400 ENSBTAP00000029301/1-727 DVAAIAGGLV DAEALIALKD LLNRVDSDTL CTEEVFPTAG AGTDLRSNYL ENSP00000392709/1-741 DVAAIAGGLV DAEALVALKD LLNRVDSDTL CTEEVFPTAG AGTDLRSNYL ENSTTRP00000012116/1-727 DVAAIAGGLV DAEALVSLKD LLNRVDSDTL CTEEVFPTTG AGTDLRSNYL bmy_01682T0/1-692 DVAAIAGGLV DAEALVALKD LLNRVDSDTL CTEEVFPTTG AGTDLRSNYL BACU014158/1-733 DVAAIAGGLV DAEALVALKD LLNRVDSDTL CTEEVFPTTG AGTDLRSNYL 401 450 ENSBTAP00000029301/1-727 LNTTIAGVEE ADVVLLVGTN PRFEAPLFNA RIRKSWLHND LKVALIGSPV ENSP00000392709/1-741 LNTTIAGVEE ADVVLLVGTN PRFEAPLFNA RIRKSWLHND LKVALIGSPV ENSTTRP00000012116/1-727 LNTTIAGVEE TDVVLLVGTN PRFEAPLFNA RIRKSWLHND LKVALIGSPV bmy_01682T0/1-692 LNTTIAGVEE TDVVLLVGTN PRFEAPLFNA RIRKSWLHND LKVALIGSPV BACU014158/1-733 LNTTIAGVEE TDVVLLVGTN PRFEAPLFNA RIRKSWLHND LKVALIGSPV 451 500 ENSBTAP00000029301/1-727 DLTYRYDHLG DSPKILQDIA SGSHPFSQVL QEAKKPMVIL GSSALQRNDG ENSP00000392709/1-741 DLTYTYDHLG DSPKILQDIA SGSHPFSQVL KEAKKPMVVL GSSALQRNDG ENSTTRP00000012116/1-727 DLTYSYDHLG DSPKILQDIA SGSHPFSQVL KEAKKPMVVL GSSALQRNDG bmy_01682T0/1-692 DLTYSYDHLG DSPKILQDIA SGSHPFSQ-- ---------- ---------- BACU014158/1-733 DLTYSYDHLG DSPKILQDIA SGSHPFSQVL KEAKKPMVVL GSSALQRNDG 501 550 ENSBTAP00000029301/1-727 AAILAAVSNI AQKIRTSSGV TGDWKVMNIL HRIASQVAAL DLGYKPGVEA ENSP00000392709/1-741 AAILAAVSSI AQKIRMTSGV TGDWKVMNIL HRIASQVAAL DLGYKPGVEA ENSTTRP00000012116/1-727 AAILAAVSNI AQKIRMSSGV TGDWKVMNIL HRIASQVAAL DLGYKPGVEA bmy_01682T0/1-692 ---------- ---IRMSSGV TGDWKVMNIL HRIASQVAAL DLGYKPGVEA BACU014158/1-733 AAILAAVSNI AQKIRMSSGV TGDWKVMNIL HRIASQVAAL DLGYKPGVEA 551 600 ENSBTAP00000029301/1-727 IQKNPPKMLF LLGADGGCIT RQDLPKDCFI VYQGHHGDVG APIADVILPG ENSP00000392709/1-741 IRKNPPKVLF LLGADGGCIT RQDLPKDCFI IYQGHHGDVG APIADVILPG ENSTTRP00000012116/1-727 IRKNPPKVLF LLGADGGCIT RQDLPKDCFI IYQGHHGDVG APIADVILPG bmy_01682T0/1-692 IRKNPPKVLF LLGADGGCIT RQDLPKDCFI IYQGHHGDVG APIADVILPG BACU014158/1-733 IRKNPPKVLF LLGADGGCIT RQDLPKDCFI IYQGHHGDVG APIADVILPG 601 650 ENSBTAP00000029301/1-727 AAYTEKSATY VNTEGRAQQT KVAVTPPGLA REDWKIIRAL SEIAGMTLPY ENSP00000392709/1-741 AAYTEKSATY VNTEGRAQQT KVAVTPPGLA REDWKIIRAL SEIAGMTLPY ENSTTRP00000012116/1-727 AAYTEKSATY VNTEGRAQQT KVAVTPPGLA REDWKIIRAL SEIAGMTLPY bmy_01682T0/1-692 AAYTEKSATY VNTEGRAQQT KVAVTPPGLA REDWKIIRAL SEIAGMTLPY BACU014158/1-733 AAYTEKSATY VNTEGRAQQT KVAVTPPGLA REDWKIIRAL SEIAGMTLPY 651 700 ENSBTAP00000029301/1-727 DTLDQVRNRL EEVSPNLVRY DDVEGANYFQ QASELSKLVN QQLLADPLVP ENSP00000392709/1-741 DTLDQVRNRL EEVSPNLVRY DDIEGANYFQ QANELSKLVN QQLLADPLVP ENSTTRP00000012116/1-727 DTLDQVRNRL EEVSPNLVRY DDVEGANYFQ QANELSKLVN QHLLADPLVP bmy_01682T0/1-692 DTLDQVRNRL EEVSPNLVRY DDVEGANYFQ QANELSKLVN QQLLADPLVP BACU014158/1-733 DTLDQVRNRL EEVSPNLVRY DDVEGANYFQ QANELSKLVN QQLLADPLVP 701 750 ENSBTAP00000029301/1-727 PQLTIKDFYM TDSISRASQT MAKCVKAVTE GAHAVEEPSI C ENSP00000392709/1-741 PQLTIKDFYM TDSISRASQT MAKCVKAVTE GAQAVEEPSI C ENSTTRP00000012116/1-727 PQLTIKDFYM TDSISRASQT MAKCVKAVTE GAHAVEEPSI C bmy_01682T0/1-692 PQLTIRDFYM TDSISRASQT MAKCVKAVTE GAHAVEEPTI C BACU014158/1-733 PQLTIRDFYM TDSISRASQT MAKCVKAVTE GAHAVEEPTI C