KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:39:13 2014 Check: 00 .. Name: ENSBTAP00000029362/1-660 Len: 720 Check: 6877 Weight: 1.00 Name: ENSP00000293217/1-660 Len: 720 Check: 1564 Weight: 1.00 Name: bmy_13797T0/1-683 Len: 720 Check: 2605 Weight: 1.00 Name: ENSTTRP00000015064/1-661 Len: 720 Check: 7439 Weight: 1.00 // 1 50 ENSBTAP00000029362/1-660 MNPDLQKERA GASFNPELLT NVLDGSPENT RRRREIENLI LNDPDFQHEN ENSP00000293217/1-660 MNPDLRRERD SASFNPELLT HILDGSPEKT RRRREIENMI LNDPDFQHED bmy_13797T0/1-683 MNQDLQKERA AASFNPELLT HVLDGSPENT RRRREIENLI LKDPDFQHED ENSTTRP00000015064/1-661 MNQDLQKERA AASFNPELLT HVLDGSPENT RRRREIENLI LKDPDFQHED 51 100 ENSBTAP00000029362/1-660 LNFLSRSQRY EVAVKKSAIM VQKMRKFGIA DPAEIMWFKK LHLVNFV--- ENSP00000293217/1-660 LNFLTRSQRY EVAVRKSAIM VKKMREFGIA DPDEIMWFKN F--------- bmy_13797T0/1-683 LNFLSRSQRY EVAVRKSATM VEKMRKFNIA DPAEIMWFKK LHLVNFVEPV ENSTTRP00000015064/1-661 LNFLSRSQRY EVAVRTSATM VEKMRKFNIA DPAEIMWFKN L--------- 101 150 ENSBTAP00000029362/1-660 ---------- ---------- ---------- ---------- ---------- ENSP00000293217/1-660 ---------- ---------- ---------- ---------- ---------- bmy_13797T0/1-683 GLNYSMFIPT LLNQGTTAQQ EKWLLSSKGL EIIGTYAQTE MGHDEATDSF ENSTTRP00000015064/1-661 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000029362/1-660 ------EPVG LNYSMFIPTL LNQGTTAQQE KWLHSSKGLE IIGTYAQTEM ENSP00000293217/1-660 VHRGRPEPLD LHLGMFLPTL LHQATAEQQE RFFMPAWNLE IIGTYAQTEM bmy_13797T0/1-683 VHRGQSGPLD LHLGMFLPTL LHQATEEQQE RFFMPAWNLE IIGTYAQTEM ENSTTRP00000015064/1-661 VHRGQSGPLD LHLGMFLPTL LHQATEEQQE RFFVPTWNLE IIGTYAQTEM 201 250 ENSBTAP00000029362/1-660 GHGTHLRGLE TTATYDPETQ EFILNSPTVT SIKWWPGGRN LVSHLCIDLA ENSP00000293217/1-660 GHGTHLRGLE TTATYDPETQ EFILNSPTVT SIKWWPGGLG KTSNHAIVLA bmy_13797T0/1-683 GHGTHLRGLE TTATYDPETQ EFILNSPTVT SIKWWPGGLG KTSNHAIVLA ENSTTRP00000015064/1-661 GHGTHLRGLE TTATYDPETQ EFILNSPTVT SIKWWPGGLG KTSNHAIVLA 251 300 ENSBTAP00000029362/1-660 QPKKKNFCYN SFDFIIKINM LSTPKTVAGI TVGDIGPKFG YDEMDNGYLK ENSP00000293217/1-660 QLITKGKCYG LHAFIVPIRE IGTHKPLPGI TVGDIGPKFG YDEIDNGYLK bmy_13797T0/1-683 QLITQGKCYG LHAFIVPIRE LGTHKPLPGI TVGDIGPKFG YDEMDNGYLK ENSTTRP00000015064/1-661 QLITQGKCYG LHAFIVPIRE LGTHKPLPGI TVGDIGPKFG YDEMDNGYLK 301 350 ENSBTAP00000029362/1-660 MDNYRIPREN MLMKHAQVKP DGTYVKPLNN KLTYGTMVFI RSFLVGESAR ENSP00000293217/1-660 MDNHRIPREN MLMKYAQVKP DGTYVKPLSN KLTYGTMVFV RSFLVGEAAR bmy_13797T0/1-683 MDNYRIPREN MLMKHAQVKP DGTYVKPLSN KLTYGTMVFI RSFLVGESAR ENSTTRP00000015064/1-661 MDNYRIPREN MLMKHAQVKP DGTYVKPLSN KLTYGTMVFI RSFLVGESAR 351 400 ENSBTAP00000029362/1-660 SLSKACTIAV RYSAVRHQSE INPGEPEPQI LDYQTQQYKL FPLLATAYAF ENSP00000293217/1-660 ALSKACTIAI RYSAVRHQSE IKPGEPEPQI LDFQTQQYKL FPLLATAYAF bmy_13797T0/1-683 CLSKACTIAI RYSA------ ---------- ---------- ---------- ENSTTRP00000015064/1-661 CLSKACTIAI RYSAVRHQSE IKPGEPEPQI LDYQTQQYKL FPLLATAYAF 401 450 ENSBTAP00000029362/1-660 QFVGAYMKET YLRINEDIGH GDLSELPELH ALTAGLKAFT SWTTNTAIEA ENSP00000293217/1-660 QFVGAYMKET YHRINEGIGQ GDLSELPELH ALTAGLKAFT SWTANTGIEA bmy_13797T0/1-683 -FVGAYMKET YHRINEDISQ GDLSELPELH ALAAGLKAFT SWTTNTGIEA ENSTTRP00000015064/1-661 QFVGAYMKET YHRINEDISQ GDLSELPELH ALTAGLKAFT SWTTNTGIEA 451 500 ENSBTAP00000029362/1-660 CRMACGGHGY SHCSGLPNIY VTFTPTCTFE GENTVMMLQT ARFLMKSYDQ ENSP00000293217/1-660 CRMACGGHGY SHCSGLPNIY VNFTPSCTFE GENTVMMLQT ARFLMKSYDQ bmy_13797T0/1-683 CRMACGGHGY SHCSGLPNIY VNFTPTCTFE GENTVMMLQT ARFLMKSYDQ ENSTTRP00000015064/1-661 CRMACGGHGY SHCSGLPNIY VNFTPTCTFE GENTVMMLQT ARFLMKSYDQ 501 550 ENSBTAP00000029362/1-660 VHSGKLVCGM VSYLNDLPSQ RIQPQQVAVW PTMVDINSPD SLTEAYKLRA ENSP00000293217/1-660 VHSGKLVCGM VSYLNDLPSQ RIQPQQVAVW PTMVDINSPE SLTEAYKLRA bmy_13797T0/1-683 VHSGKLVCGM VSYLNDLPSQ HIQPQQVAVW PTVVDINSPD SLTEAYKLRA ENSTTRP00000015064/1-661 VHSGKLVCGM VSYLNDLPSQ HIQPQQVAVW PTVVDINSPD SLTEAYKLRA 551 600 ENSBTAP00000029362/1-660 ARLVEIAAKN LQTEVIHRKS KEVAWNLTSI DLVRASEAHC HYVVVKLFTE ENSP00000293217/1-660 ARLVEIAAKN LQKEVIHRKS KEVAWNLTSV DLVRASEAHC HYVVVKLFSE bmy_13797T0/1-683 ARLVEIAAKN LQTEVIHRKS KEVAWNLTSV DLVQASEAHC HYVAVKLFSE ENSTTRP00000015064/1-661 ARLVEIAAKN LQTEVIRRKS KEVAWNLTSV DLVQASEAHC HYVAVKLFSE 601 650 ENSBTAP00000029362/1-660 KVLQIQEKSI QAVLRRLCLL YSLYGISQNA GDFLQGSIMT ESQITQVNGR ENSP00000293217/1-660 KLLKIQDKAI QAVLRSLCLL YSLYGISQNA GDFLQGSIMT EPQITQVNQR bmy_13797T0/1-683 KLLQIQEKSI QAVLRNLCLL YSLYGISRNA GDFLQGSIMT ESQITQVNER ENSTTRP00000015064/1-661 KLLQIQEKSI QAVLRNLCLL YCLYGISRNA GDFLQGSIMT ESQITQVNER 651 700 ENSBTAP00000029362/1-660 IKELLTAIRP DAVALVDAFD FQDVTLGSVL GRYDGNVYEN LFEWAKKSPL ENSP00000293217/1-660 VKELLTLIRS DAVALVDAFD FQDVTLGSVL GRYDGNVYEN LFEWAKNSPL bmy_13797T0/1-683 IKELLTVIRP DAVALVDAFD FQDVTLGSVL GRYDGNVYEN LFEWAKKSPL ENSTTRP00000015064/1-661 VKELLTVIRP DAVALVDAFD FQDVTLGSVL GRYDGNVYEN LFEWAKKSPL 701 750 ENSBTAP00000029362/1-660 NKTEVHESY- KHLKSLQSKL ENSP00000293217/1-660 NKAEVHESY- KHLKSLQSKL bmy_13797T0/1-683 NKTEVHESYH KHLKSLQSKL ENSTTRP00000015064/1-661 NNTEVHESYY KHLKSLQSKL