KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:39:13 2014 Check: 00 .. Name: bmy_20860T0/1-171 Len: 251 Check: 8314 Weight: 1.00 Name: BACU015214/1-207 Len: 251 Check: 7985 Weight: 1.00 Name: ENSP00000303525/1-237 Len: 251 Check: 2795 Weight: 1.00 Name: ENSTTRP00000000242/1-237 Len: 251 Check: 3280 Weight: 1.00 Name: ENSBTAP00000029363/1-237 Len: 251 Check: 3147 Weight: 1.00 // 1 50 bmy_20860T0/1-171 MVGRQDAVRV RARSCCWVRG GPGAG-APSS PSGGGGH--- -LYRNVTDGF BACU015214/1-207 ---------- MDRVCAVFGG SRGIGRAVAR LMAQRDYRLA IVARNL-QGA ENSP00000303525/1-237 ---------- MDKVCAVFGG SRGIGRAVAQ LMARKGYRLA VIARNL-EGA ENSTTRP00000000242/1-237 ---------- MDRVCAVFGG SRGIGKAVAR LMAQRGYRLA IVARNL-QGA ENSBTAP00000029363/1-237 ---------- MDKVCAVFGG SRGIGRAVAR LMAQRGYRLA IVARNL-EGA 51 100 bmy_20860T0/1-171 TQVITWAAGD HLALSCDVAK EHDVQNTFEE IEKNLGRVNF LVNAAGLNRD BACU015214/1-207 RAVAGDLGGD HLALSCDVAK EHDVQNTFEE IEKNLGRVNF LVNAAGINRD ENSP00000303525/1-237 KAAAGDLGGD HLAFSCDVAK EHDVQNTFEE LEKHLGRVNF LVNAAGINRD ENSTTRP00000000242/1-237 RAAAGDLGGD HLALSCDVAK EYDVQNTFEE IEKNLGRVNF LVNAAGINRD ENSBTAP00000029363/1-237 RAAAGDLGGD HLALSCDVAK EHDVQNTFEE IEKNLGRVNF LVNAAGINRD 101 150 bmy_20860T0/1-171 NLLVRTNAED MLSQLHTNLL GSMLTCRAAV KTMIKQQTGS IVN---VGSI BACU015214/1-207 NLLVRTNAED MLSQLHTNLL GSMLTCRAAV KTMIKQQTGS IVNVVAVGPL ENSP00000303525/1-237 GLLVRTKTED MVSQLHTNLL GSMLTCKAAM RTMIQQQGGS IVN---VGSI ENSTTRP00000000242/1-237 NLLVRTNAED MLSQLHTNLL GSMLTCRAAV KTMIKQQTGS IVN---VGSV ENSBTAP00000029363/1-237 NLLVRTNTED MLSQLHTNLL GSMLTCRAAL KTMIKQQRGS IVN---VGSV 151 200 bmy_20860T0/1-171 AGVKGSLASP RTVPVKAGQ- ---------- ---------- ---------- BACU015214/1-207 SQLAVGTGAS PLGARKEEAE VHPGHYAPWA LELVLRLAPV ---------- ENSP00000303525/1-237 VGLKGNSGQS VYSASKGGLV GFSRALAKEV ARKKIRVNVV APGFVHTDMT ENSTTRP00000000242/1-237 VGVKGSSGQS VYSASKGGLV AFSRALAKEV ARKKIRVNVV APGFVHTDMT ENSBTAP00000029363/1-237 VGLKGNSGQS VYSASKGGLV GFSRALAKEV AKKKIRVNVV APGFIHTDMT 201 250 bmy_20860T0/1-171 ---------- ---------- ---------- -----LRSHA LLLKE----- BACU015214/1-207 -------LNQ QGP----GNC WNV------- -----LAGLL LYGVPSSQFI ENSP00000303525/1-237 KDLKEEHLKK NIPLGRFGET IEVAHAVVFL LESPYITGHV LVVDGGLQLI ENSTTRP00000000242/1-237 KDLKEEHLKK NIPLGRFGDP IDVAHALVFL LESPYITGHV LVVDGGLQLT ENSBTAP00000029363/1-237 KDLNEELLKK NIPLGRFGDA LDVAQAAVFL LESPYVTGHV LVVDGGLQLT 251 300 bmy_20860T0/1-171 - BACU015214/1-207 V ENSP00000303525/1-237 L ENSTTRP00000000242/1-237 M ENSBTAP00000029363/1-237 M