KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:39:14 2014 Check: 00 .. Name: ENSTTRP00000014181/1-326 Len: 368 Check: 3248 Weight: 1.00 Name: ENSBTAP00000029367/1-321 Len: 368 Check: 6343 Weight: 1.00 Name: ENSP00000331313/1-327 Len: 368 Check: 3117 Weight: 1.00 Name: bmy_02444T0/1-367 Len: 368 Check: 4999 Weight: 1.00 Name: BACU017098/1-326 Len: 368 Check: 1705 Weight: 1.00 // 1 50 ENSTTRP00000014181/1-326 ---------- ---------- ---------- ---------- -MAAP-PLPP ENSBTAP00000029367/1-321 ---------- ---------- ---------- ---------- -MAAP----V ENSP00000331313/1-327 ---------- ---------- ---------- ---------- -MTAPCPPPP bmy_02444T0/1-367 GCGHCCPCLG TVPVGTEGAG VGSIQGRSCA FPKEDSPQVT SMAAP-PLPP BACU017098/1-326 ---------- ---------- ---------- ---------- -MAAP-PLPP 51 100 ENSTTRP00000014181/1-326 PDPQFVLRGA QSAVHTLHFC EGAQGQGRPL LLSGSLRGLV HIWSLQTRRV ENSBTAP00000029367/1-321 PNPQFVLRGA RSAVHALHFC HGA--QGHPL LLSGSLRGLV HVWSLQTRRP ENSP00000331313/1-327 PDPQFVLRGT QSPVHALHFC EGAQAQGRPL LFSGSQSGLV HIWSLQTRRA bmy_02444T0/1-367 PDPQFVLRGA QSAVHALHFC EGAQGQGRPL LLSGSLRGLV HIWSLQTRRV BACU017098/1-326 PDPQFVLRGA QSAVHALHFC EGAQGQGRPL LLSGSLRGLV HIWSLQTRRV 101 150 ENSTTRP00000014181/1-326 VATLDGHGGQ CVTWLQTLPQ GPQLLXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000029367/1-321 LAALDGHGGQ CVTWLHTLPQ GPQLLSQGRD LQLCVWDLAE GRNAVVDAVH ENSP00000331313/1-327 VTTLDGHGGQ CVTWLQTLPQ GRQLLSQGRD LKLCLWDLAE GRSAVVDSVC bmy_02444T0/1-367 VTTLDGHGGQ CVTWLQTLPQ GPQLLSQGRD LKLCVWDLAE GRNAVVDSVL BACU017098/1-326 VATLDGHGGQ CVTWLQTLPQ GPQLLSQGRD LKLCVWDLAE GRNAIVDSVL 151 200 ENSTTRP00000014181/1-326 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX VQILEMPSKT SVCSLKPEAQ ENSBTAP00000029367/1-321 LESVGFCRAS VLAEGPQRWM LAVPGRGSDE VQVLELPSKT SVSCLKPEAG ENSP00000331313/1-327 LESVGFCRSS ILAGGQPRWT LAVPGRGSDE VQILEMPSKT SVCALKPKAD bmy_02444T0/1-367 LESVGFCRGS VLAGGLQRWM LAVPGRGSDE VQILEMPSKT SVCSLKPEAQ BACU017098/1-326 LESMGFCRGS VLAGGLQRWM LAVPGRGCHE VQILEMPSKT SVCSLKPEAQ 201 250 ENSTTRP00000014181/1-326 ARLGMPMCLQ LWQADSSPRP LLLAGYEDGS VALWDVSSRK VCSRVSCHTE ENSBTAP00000029367/1-321 ARLGMPMCLQ LWQAESSPRP LLLAGYEDGS LALWDVSARK VCSRVACHSE ENSP00000331313/1-327 AKLGMPMCLR LWQADCSSRP LLLAGYEDGS VVLWDVSEQK VCSRIACHEE bmy_02444T0/1-367 ARLGMPMCLQ LWQADSSPHP LLLAGYEDGS VALWDVSSRK VCSRVACHTE BACU017098/1-326 ARPGMPMCLQ LWQADSSPRP LLLAGYEDGS VALWDVSSRK VCSRVACHTE 251 300 ENSTTRP00000014181/1-326 PVMGLDFDSQ EARGVSGSAE KALAVWSLDE QQALQVRGTH VLTNPGIADV ENSBTAP00000029367/1-321 PVMALALDPR RARGVSGSAE KVLAVWSLEG QQALQERGGH SAVSPGIPSL ENSP00000331313/1-327 PVMDLDFDSQ KARGISGSAG KALAVWSLDW QQALQVRGTH ELTNPGIAEV bmy_02444T0/1-367 PVMGLDFDSQ EARGVSGSAE KTLAVWSLDE QQALQVRGTH VLPNPGIADV BACU017098/1-326 PVMGLDFDSQ EARGVSGSAE KTLAVWSLDE QQALQVRGTH VLTNPGIADI 301 350 ENSTTRP00000014181/1-326 KIRPDRKILA TAGWDHRVRV FHWRTMKPLA VLAFHSATVH CVAFADDGLL ENSBTAP00000029367/1-321 KIRPDSKILA TAGWDHRVRV FQWRTMKPLA VLAFHSATVH CVAFNTTGLL ENSP00000331313/1-327 TIRPDRKILA TAGWDHRIRV FHWRTMQPLA VLAFHSAAVQ CVAFTADGLL bmy_02444T0/1-367 KIRPDRRILA TAGWDHRVRV FHWRTMKPLA VLAFHSATVH CVAFAADGLL BACU017098/1-326 KIRPDRRILA TAGWDHCVRV FHWRTMKPLA VLAFHSATVH CVAFAADGLL 351 400 ENSTTRP00000014181/1-326 ATGSGDQRIS VWSLYPCT ENSBTAP00000029367/1-321 AAGSGDQRIS VWSLYPPT ENSP00000331313/1-327 AAGSKDQRIS LWSLYPRA bmy_02444T0/1-367 ATGSGDQRIS VWSLYPRT BACU017098/1-326 ATGSGDQRIS VWSLYPCT