KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:39:14 2014 Check: 00 .. Name: bmy_14700T0/1-517 Len: 868 Check: 2107 Weight: 1.00 Name: ENSP00000386531/1-866 Len: 868 Check: 4638 Weight: 1.00 Name: BACU017118/1-867 Len: 868 Check: 2285 Weight: 1.00 Name: ENSBTAP00000029373/1-867 Len: 868 Check: 4420 Weight: 1.00 // 1 50 bmy_14700T0/1-517 ---------- --------MA ELLPRWPS-- ---------- ---------- ENSP00000386531/1-866 MTTFGA-VAE WRLPSLRRAT LWIPQWFAKK AIFNSPLEAA MAFPHLQQPS BACU017118/1-867 MTTFRRRLAE WRSRSLKREA LWFFQWSSKT AGLDPAREAA MAFPHLQQPS ENSBTAP00000029373/1-867 MTTFRRLVAE WRLPSLKWVP SLSLQWSPTT AAPDPARQAA MAFPHLQQPS 51 100 bmy_14700T0/1-517 ---------- ---------- ---------- ---------- ---------E ENSP00000386531/1-866 FLLASLKADS INKPFAQQCQ DLVKVIEDFP AKELHTIFPW LVESIFGSLD BACU017118/1-867 FLLASLKADS INKPFAQRCQ DLVKVIEDFP AKELHAIFPW LVESIFGSLD ENSBTAP00000029373/1-867 FLLASLKADS MNKPFAQRCQ DLVKVIEDFP AKELHSVFPW LVESIFGSLD 101 150 bmy_14700T0/1-517 GAMCGA---S MGGEVGTAQH EV-------- ---------- ---------- ENSP00000386531/1-866 GVLVGWNLRC LQGRVNPVEY SIVMEFLDPG GPMMKLVYKL QAEDYKFDFP BACU017118/1-867 GVLAGWNLRC LQGRVSPVEY SIAMEFLDPG GPMMKLVYKL QAEDYKFDFP ENSBTAP00000029373/1-867 GVLPGWNLRC LQGRVSPVEH SMAMEFLDPG GPMMKLVYKL QAEDYKFDFP 151 200 bmy_14700T0/1-517 ---------- ---------- ---------- ---------- ---------- ENSP00000386531/1-866 VSYLPGPVKA SIQECILPDS PLYHNKVQFT PTGGLGLNLA LNPFEYYIFF BACU017118/1-867 VSYLPGPVKA SIQERVLPDS PLYHNKVQLP STGGLGLHLA LNPFEYYMFF ENSBTAP00000029373/1-867 VSYLPGPVKA SIQERVLPDS PLYHNKLQLP PTGGLGLYLA LNPFEYYMFF 201 250 bmy_14700T0/1-517 -----LTRAL PPGVLHAHRG ACA------- ---------- ---------- ENSP00000386531/1-866 FALSLITQKP LPVSLHVRTS DCAYFILVDR YLSWFLPTEG SVPPPLSSSP BACU017118/1-867 FALSLITQKP PPGALHVRTS DCAYFILVDR YLAWFLPTEG SVLPPLSSSP ENSBTAP00000029373/1-867 FALSLIAQKP PPGALHVRTS DCAYFILVDR YLAWFLPTEG SVLPPLSSSP 251 300 bmy_14700T0/1-517 GGAAAAEAPA RLRQQPAARA GLTLRPLPRR ---------- ---------- ENSP00000386531/1-866 GGTSPSPPP- RTPAIPFASY GLHHTSLLKR HISHQTSVNA DPASHEIWRS BACU017118/1-867 GGPSPSPAP- RTPAVPFASY GLHHTSLLKR HISHQTSVNA DPASHEIWRS ENSBTAP00000029373/1-867 GGPSPSPAP- RTPAVPFASY GLHHTSLLKR HVSHQTSVNA DPASHEIWRS 301 350 bmy_14700T0/1-517 ---------- ---------- ---QPP---- ---------- ---------- ENSP00000386531/1-866 ETLLQVFVEM WLHHYSLEMY QKMQSPHAKL EVLHYRLSVS SALYSPAQPS BACU017118/1-867 ETLLQVFVEM WLHHYSLEMY QKMQSPHAKL EVLHYRLSVC SALHSPAQPS ENSBTAP00000029373/1-867 ETLLQVFVEM WLHHYSLEMY QKMQSPHAKL EVLHYRLSVC RALHSPAHPS 351 400 bmy_14700T0/1-517 ---------- ---------- ---------- ---------- ---------- ENSP00000386531/1-866 LQALHAYQES FTPTEEHVLV VRLLLKHLHA FANSLKPEQA SPSAHSHATS BACU017118/1-867 LQALHAHQES FMPTEEHVLV VRLLLKHLHA FANSLRPEQA SPSAHSHAAS ENSBTAP00000029373/1-867 LQALHAHQES FMPTEEHVLV VRLLLKHLHA FANSLRPEQA SPSAHSHAAS 401 450 bmy_14700T0/1-517 ---------- ---------- ---------- --GGVQTVLE MWLSYLQPWR ENSP00000386531/1-866 PLEEFKRAAV PRFVQQKLYL FLQHCFGHWP LDASFRAVLE MWLSYLQPWR BACU017118/1-867 PLEEFKRAAV PRFVQQKLYL FLQHCFGHWP LDASFRAVLE MWLSYLQPWR ENSBTAP00000029373/1-867 PLEEFKRAAV PRFVQQKLYL FLQHCFDHWP LDASFRAVLE MWLSYLQPWR 451 500 bmy_14700T0/1-517 YAPEKQAPSS DCQARSVSER WAPFVQENLL VYTKLFLGFL SRALRTDLVS ENSP00000386531/1-866 YAPDKQAPGS DSQPRCVSEK WAPFVQENLL MYTKLFVGFL NRALRTDLVS BACU017118/1-867 YAPEKQAPSS DCQARSVSER WAPFVQENLL VYTKLFLGFL SRALRTDLVS ENSBTAP00000029373/1-867 YAPERQAPGS DCQARSASER WAPFVQENLL IYTKLFLGFL NRALRTDLVS 501 550 bmy_14700T0/1-517 PKNALMVFRV AKVFAQPNLA EMIQRGEQLF LEPELVIPHR QHRLFTVPTF ENSP00000386531/1-866 PKHALMVFRV AKVFAQPNLA EMIQKGEQLF LEPELVIPHR QHRLFTAPTF BACU017118/1-867 PKNALMVFRV AKVFAQPNLA EMIQRGEQLF LEPELVIPHR QHRLFTVPTF ENSBTAP00000029373/1-867 PKNALMVFRV AKVFAQPNLA EMIQRGEQLF LEPELGVPQR QHRLFTAPSF 551 600 bmy_14700T0/1-517 TGSFLSSWPP AITDASFKVK SHVYSLEGQD CKYTPMFGPE IRALVLRLAQ ENSP00000386531/1-866 TGSFLSPWPP AVTDASFKVK SHVYSLEGQD CKYTPMFGPE ARTLVLRLAQ BACU017118/1-867 TGSFLSSWPP AITDASFKVK SHVYSLEGQD CKYTPMFGPE IRALVLRLAQ ENSBTAP00000029373/1-867 TGSFLSSWPP AVTDASFKVK SHVYSLEGQD CKYTPMFGPE VRALVLRLAQ 601 650 bmy_14700T0/1-517 LITQAKQTAK SLSDQYGEST AARPFLSWLG FYPADTNGSY PGNDLDEMGQ ENSP00000386531/1-866 LITQAKHTAK SISDQCAESP AGHSFLSWLG FSSMDTNGSY TANDLDEMGQ BACU017118/1-867 LITQAKQTAK SLSDQYGEST AARPFLSWLG FYPADTNGSY PGNDLDEMGQ ENSBTAP00000029373/1-867 LITQAKQTAK SLSDQCGESA AGRPFLSWLG FYPADTNGSY AGNDLDEMGQ 651 700 bmy_14700T0/1-517 DSVRKTDEYL EKALEYLCQV FRLSEAQLAQ LTLALGTTQD ENGKKQLPDC ENSP00000386531/1-866 DSVRKTDEYL EKALEYLRQI FRLSEAQLRQ FTLALGTTQD ENGKKQLPDC BACU017118/1-867 DRVRKTDEYL EKALEYLCQV FRLSEAQLAQ LTLALGTTQD ENGKKQLPDC ENSBTAP00000029373/1-867 DSVRKTDEYL EKALEYLCQA FRLSEAQLAQ LTLALGTTQD ENGKKQLPDC 701 750 bmy_14700T0/1-517 IVGEDGLILT PLGRYQIING LRRFDIEYQG DSELQPIRSY EIAGLVRVLF ENSP00000386531/1-866 IVGEDGLILT PLGRYQIING LRRFEIEYQG DPELQPIRSY EIASLVRTLF BACU017118/1-867 IVGEDGLILT PLGRYQIING LRRFDIEYQG DSELQPIRSY GIAGLARVPS ENSBTAP00000029373/1-867 IVGDDGLILT PLGRYQIISG LRRFDIEYQG DWELQPIRSY EIASLVRALF 751 800 bmy_14700T0/1-517 RLSSAINRRF AGQMAALCSR ADFLGSFCRY HLLEPGLSDR RLLSPVGRER ENSP00000386531/1-866 RLSSAINHRF AGQMAALCSR DDFLGSFCRY HLTEPGLASR HLLSPVGRRQ BACU017118/1-867 RLSSAINRRF AGQMVALCSR ADFLGSFCRY HLLEPGLLDR RLLSPVGRGR ENSBTAP00000029373/1-867 QLSSAINRRF AGQMAALCSR ADFLGSFCRY HLLEPGLSGR RLLSPVGRGP 801 850 bmy_14700T0/1-517 AASLARGPRL SLRFLGSYRT LLALLLAFFV ASLFCIGPLL CALLLVLGYV ENSP00000386531/1-866 VAGHTRGPRL SLRFLGSYRT LVSLLLAFFV ASLFCVGPLP CTLLLTLGYV BACU017118/1-867 AASLARGPRL SLRFLGSYRT LLALLLAFFV ASLFCIGPLL CALLLVLGYV ENSBTAP00000029373/1-867 AASRARGPRL SLRFLGSYRT LLSLVLAFSV ASLFCVGPLL CALLLVLGYV 851 900 bmy_14700T0/1-517 LYAVAMTLLT EQGKLHQL ENSP00000386531/1-866 LYASAMTLLT ERGKLHQP BACU017118/1-867 LYAVAMTLLT EQGKLHQL ENSBTAP00000029373/1-867 LYAVAMTLLT ERGKLHQL