KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:39:15 2014 Check: 00 .. Name: ENSTTRP00000015857/1-521 Len: 594 Check: 12 Weight: 1.00 Name: ENSP00000390427/1-527 Len: 594 Check: 6754 Weight: 1.00 Name: ENSBTAP00000029375/1-554 Len: 594 Check: 3807 Weight: 1.00 Name: bmy_14726T0/1-552 Len: 594 Check: 4867 Weight: 1.00 Name: BACU017136/1-509 Len: 594 Check: 3763 Weight: 1.00 // 1 50 ENSTTRP00000015857/1-521 MGKRQHQKDK MYITCAEYTH FYGGKKPDIA QTDFRRLPFD HCSLSLQPFV ENSP00000390427/1-527 MGKRQHQKDK MYITCAEYTH FYGGKKPDLP QTNFRRLPFD HCSLSLQPFV ENSBTAP00000029375/1-554 MGKRQHQKDK MYITCAEYTH FYGGKKPDVP QTNFRRLPFD HCSLSLQPFA bmy_14726T0/1-552 MGKRQHQKDK MYITCAEYTH FYGGKKPDIA QTDFRRLPFD HCSLSLQPFV BACU017136/1-509 MGKRQHQKDK MYITCAEYTH FYGGKKPDIA QTDFRRLPFD HCR------- 51 100 ENSTTRP00000015857/1-521 YPVCTPEGIV FDLLNIVPWL KKYGTNPSNG EKLDGRSLIK LNFAKNSEXX ENSP00000390427/1-527 YPVCTPDGIV FDLLNIVPWL KKYGTNPSNG EKLDGRSLIK LNFSKNSEGK ENSBTAP00000029375/1-554 YPVCTPEGVV FDLLNIVPWL KKYGTNPSNG EKLDGRSLIK LNFAKNSEGK bmy_14726T0/1-552 YPVCTPEGVV FDLLNIVPWL KKYGTNPSNG EKLDGRCLIK LNFAKNSEGK BACU017136/1-509 ---------- ----NIVPWL KKYGTNPSNG EKLDGRCLIK LNFAKNSEGK 101 150 ENSTTRP00000015857/1-521 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXA VEQLNIKAKN FRDLLTDEPF ENSP00000390427/1-527 YHCPVLFTVF TNNTHIVAVR TTGNVYAYEA VEQLNIKAKN FRDLLTDEPF ENSBTAP00000029375/1-554 YHCPVLFTVF TNSSHIVAIR TTGNVYAHEA VEQLNIKAKN FRDLLTDEPF bmy_14726T0/1-552 YHCPVLFTVF TNNSHIVAIR TTGNVYAHEA VEQLNIKAKN FRDLLTDEPF BACU017136/1-509 YHCPVLFTVF TNNSHIVAIR TTGNVYAHEA VEQLNIKAKN FRDLLTDEPF 151 200 ENSTTRP00000015857/1-521 SRQDIITL-- ---------- ---------- ---------- QDPTSLDKFN ENSP00000390427/1-527 SRQDIITL-- ---------- ---------- ---------- QDPTNLDKFN ENSBTAP00000029375/1-554 CRQDIITLQP RPLPGPCLLL PSSCVAQDVP GSLPDTFFVP QDPTNLDKFN bmy_14726T0/1-552 SRQDIITL-- ---------- ---------- ---------- QDPTSLDKFN BACU017136/1-509 SRQDIITL-- ---------- ---------- ---------- QDPTSLDKFN 201 250 ENSTTRP00000015857/1-521 VSNFFHVKNN MKIIDPDEEK AKQDPSYYLK NTNTETRETL QELYKEFKGD ENSP00000390427/1-527 VSNFYHVKNN MKIIDPDEEK AKQDPSYYLK NTNAETRETL QELYKEFKGD ENSBTAP00000029375/1-554 VSNFFHVKNN MKIIDPDEEK AKQDPSYYLK NTNTETRETL QELYKEFKGD bmy_14726T0/1-552 VSNFFHVKNN MKIIDPDEEK AKQDPSYYLK NTNTETRETL QELYKEFKGD BACU017136/1-509 VSNFFHVKNN MKIIDPDEEK AKQDPSYYLK NTNTETRETL QELYKEFKGD 251 300 ENSTTRP00000015857/1-521 EMLAATMKVP EKTKVDRLNA AHYSTEKVSA SFTSTAMVP- -ETTHE---- ENSP00000390427/1-527 EILAATMKAP EKKKVDKLNA AHYSTGKVSA SFTSTAMVP- -ETTHE---- ENSBTAP00000029375/1-554 EVLAATMRVP EKAKVDKLNA AHYSTGRVSA SFTSTAMVP- -ETTHE---- bmy_14726T0/1-552 EMLAATMKVP EKTKVDRLNA AHYSTGKVSA SFTSTAMVP- -ETTHEAGAV BACU017136/1-509 EVLAATMKVP EKTKVDRLNA AGPGELGLGD PGGGTLRCPP KELSRKLSVL 301 350 ENSTTRP00000015857/1-521 ---------- ---------- ------AAAI DEDVLRYQFV KKKGYVRLHT ENSP00000390427/1-527 ---------- ---------- ------AAAI DEDVLRYQFV KKKGYVRLHT ENSBTAP00000029375/1-554 ---------- ---------- ------AAAI DEDELRYQFV KKKGYVRLHT bmy_14726T0/1-552 RPRCSALPDA PGGSGPRTGR QLRPLLAAAI DEDVLRYQFV KKKGYVRLHT BACU017136/1-509 KE-------- ---------- ------EAAI DEDVLRYRFV KKKGYVRLHT 351 400 ENSTTRP00000015857/1-521 NLGDLNLELH CDLTPKTCEN FIKLCKKQYY DGTLFHRSIR NFVIQGG-PT ENSP00000390427/1-527 NKGDLNLELH CDLTPKTCEN FIRLCKKHYY DGTIFHRSIR NFVIQGGDPT ENSBTAP00000029375/1-554 SLGDLNLELH CDLTPKTCEN FIRLCKKRYY DGTVFHRSIR NFVIQGGDPT bmy_14726T0/1-552 NLGDLNLELH CDLTPKTCEN FIKLCKKQYY DGTLFHRSIR NFVIQGGDPT BACU017136/1-509 NLGDLNLELH CDLTPKTCEN FIKLCKKQYY DGTLFHRSIR NFVIQGGDPT 401 450 ENSTTRP00000015857/1-521 GTGTXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXFITFRS ENSP00000390427/1-527 GTGTGGESYW GKPFKDEFRP NLSHTGRGIL SMANSGPNSN RSQFFITFRS ENSBTAP00000029375/1-554 GTGTGGESCW GKPFRDEFRP NLSHTGRGVL SMANSGPNTN KSQFFITFRS bmy_14726T0/1-552 GTGTGGESYW GRPFRDEFRP NLSHTGRGVL SMANSGPNTN KSQFFITFRS BACU017136/1-509 GTGTGGESYW GKPFRDEFRP NLSHTGRGVL SMANSGPNTN KSQFFITFRS 451 500 ENSTTRP00000015857/1-521 CAYLDRKHTI FGRVVGGFDT LTAMENVESD PKTDRPKEEI RMDSTTVFVD ENSP00000390427/1-527 CAYLDKKHTI FGRVVGGFDV LTAMENVESD PKTDRPKEEI RIDATTVFVD ENSBTAP00000029375/1-554 CAYLDKKHTI FGRVVGGFDT LTAMENVESD PKTDRPKEEI RIDSTIVFVD bmy_14726T0/1-552 CAYLDKKHTI FGRVVGGFDT LTAMENVESD PKTDRPKEEI RMDSTTVFVD BACU017136/1-509 CAYLDKKHTI FGRVVGGFDT LTAMENVESD PKTDRPKEEI RMDSTTVFVD 501 550 ENSTTRP00000015857/1-521 PYEEADAKIA EERKKTRLEA AALESTAKTS QPQQGSQGPQ TYRQGVGKYI ENSP00000390427/1-527 PYEEADAQIA QER-KTQLK- VAPETKVKSS QPQAGSQGPQ TFRQGVGKYI ENSBTAP00000029375/1-554 PYEEADAQIA EERRKTQLEA AAPESTAKSS QSPQGSQGPQ TYRQGVGKYI bmy_14726T0/1-552 PYEEADAKIA EERKKTRLEA AALESTAKTS QPQQGSQGPQ TYRQGVGKYI BACU017136/1-509 PYEEADAKIA EERKKTRLEA VALESTAKTS QPQQGSQGPQ TYRQGVGKYI 551 600 ENSTTRP00000015857/1-521 SPVVTKRVAE EEPSTSAAVP VAKKKPSRGF GDFSSW---- ---- ENSP00000390427/1-527 NPAATEQ-QR KSPQPVPLSP CPRRSPVGVL GTSAPGSSRL PDDH ENSBTAP00000029375/1-554 SPAVTKRVAE EEPSTSAAVP VAKKKPSRGF GDFSSW---- ---- bmy_14726T0/1-552 SPVVTKRVAE EEPSTSAAVP VAKKKPSRGF GDFSSW---- ---- BACU017136/1-509 SPVVTKRVAE EEPSTSAAVP VAKKKPSRGF GDFSSW---- ----