KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:39:17 2014 Check: 00 .. Name: ENSBTAP00000029397/1-403 Len: 417 Check: 5013 Weight: 1.00 Name: ENSP00000336630/1-412 Len: 417 Check: 7326 Weight: 1.00 Name: ENSTTRP00000013932/1-411 Len: 417 Check: 1314 Weight: 1.00 Name: bmy_15263T0/1-272 Len: 417 Check: 6295 Weight: 1.00 Name: BACU017161/1-408 Len: 417 Check: 7389 Weight: 1.00 // 1 50 ENSBTAP00000029397/1-403 RAMSGFSVYI AVELAIAVLA ILGNVLVCWA VWINSNLQNV TNYFVASLAA ENSP00000336630/1-412 MPIMGSSVYI TVELAIAVLA ILGNVLVCWA VWLNSNLQNV TNYFVVSLAA ENSTTRP00000013932/1-411 VPNMGSSVYI MVELAIAVLA ILGNVLVCWA VWLNSNLQNV TNYFVVSLAA bmy_15263T0/1-272 ---------- ---------- ---------- ---------- ---------- BACU017161/1-408 ---MGSSVYI MVELAIAVLA ILGNVLVCWA VWLNSNLQNV TNYFVVSLAA 51 100 ENSBTAP00000029397/1-403 ADIAVGVLAI PFAVTLSTGF CAACHSCLFF ACFVLVLTQS SIFSLLAIAI ENSP00000336630/1-412 ADIAVGVLAI PFAITISTGF CAACHGCLFI ACFVLVLTQS SIFSLLAIAI ENSTTRP00000013932/1-411 ADIAVGVLAI PFAITISTGF CAACHSCLFF ACFVLVLTQS SIFSLLAIAI bmy_15263T0/1-272 ---------- ---------- ---------- ---------- ---------- BACU017161/1-408 ADIAVGVLAI PFAITISTGF CAACHSCLFF ACFVLVLTQS SIFSLLAIAI 101 150 ENSBTAP00000029397/1-403 DRYIAIRIPL RYNGLVTGTR AKGIIAVCWV LSFAIGLTPM LGWNNCSQ-Q ENSP00000336630/1-412 DRYIAIRIPL RYNGLVTGTR AKGIIAICWV LSFAIGLTPM LGWNNCGQPK ENSTTRP00000013932/1-411 DRYIAIRXXX XYNGLVTGTR AKGIIAVCWV LSFAIGLTPM LGWNNCSQ-Q bmy_15263T0/1-272 ---------- ---------- ---------- ---------M LGWNNCSQ-Q BACU017161/1-408 DRYIAIRIPL RYNGLVTGTR AKGIIAVCWV LSFAIGLTPM LGWNNCSQ-Q 151 200 ENSBTAP00000029397/1-403 ESRNSSQVCG EGQVACLFED VVPMGYMVYY NFFACVLLPL LLMLGVYLRI ENSP00000336630/1-412 EGKNHSQGCG EGQVACLFED VVPMNYMVYF NFFACVLVPL LLMLGVYLRI ENSTTRP00000013932/1-411 EGRNHSQGCR VGQVACLFED VVPMNYMVYY NFFACVLVPL LLMLGVYLRI bmy_15263T0/1-272 EGRNHSQGCR VGQVACLFED VVPMNYMVYY NFFACVLVPL LLMLGVYLRI BACU017161/1-408 EGRNHSQGCR VGQVACLFED VVPMNYMVYY NFFACVLVPL LLMLGIYLRI 201 250 ENSBTAP00000029397/1-403 FLAARRQLKQ TESQPPPPGE RPRSTLQKEV HAAKSLAIIV GLFALCWLPL ENSP00000336630/1-412 FLAARRQLKQ MESQPL-PGE RARSTLQKEV HAAKSLAIIV GLFALCWLPL ENSTTRP00000013932/1-411 FLAARRQLKQ MESQPL-PGE RARSTLQKEV HAAKSLAIIV GLFALCWLPL bmy_15263T0/1-272 FLAARRQLKQ MESQPL-PGE RARSTLQKEV HAAKSLAIIV GLFALCWLPL BACU017161/1-408 FLAARRQLKQ MESQPL-PGE RARSTLQKEV HAAKSLAIIV GLFALCWLPL 251 300 ENSBTAP00000029397/1-403 HVINCFTFFC PSCGHAPPWL MYLTIVLSHG NSVVNPFIYA YRIREFRHTF ENSP00000336630/1-412 HIINCFTFFC PDCSHAPLWL MYLAIVLSHT NSVVNPFIYA YRIREFRQTF ENSTTRP00000013932/1-411 HIINCFTFFC PKCSHAPPWL MYLTIILSHT NSVVNPFIYA YRIREFRQTF bmy_15263T0/1-272 HIINCFTFFC PKCSHAPPWL MYLTIILSHT NSVVNPFIYA YRIREFRQTF BACU017161/1-408 HIINCFTFFC PKCSHAPPWL MYLTIILSHT NSVVNPFIYA YRIREFRQTF 301 350 ENSBTAP00000029397/1-403 RRIVRSHVLR RRRRREPFKA GDPGARALAA H--DPERVGL RLNGHPPGGV ENSP00000336630/1-412 RKIIRSHVL- --RQQEPFKA AGTSARVLAA HGSDGEQVSL RLNGHPP-GV ENSTTRP00000013932/1-411 RKIIRSHIL- --RQREPFKA GGTSARALAA HSSDAEQISL RLNGHPP-GV bmy_15263T0/1-272 RKIIRSHIL- --RQREPFKA GGTSARALAA HSSDAEQISL RLNGHPP-GV BACU017161/1-408 RKIIRSHIL- --RQREPFKA GGTSARALAA HSSDAEQISL RLNGHPP-GV 351 400 ENSBTAP00000029397/1-403 WANGSAP--- -RPDGPALAL PSAGGARGSQ RDARVPDV-- ---QLQGRRP ENSP00000336630/1-412 WANGSAPHPE RRPNGYALGL VSGGSAQESQ GNTGLPDVEL LSHELKGVCP ENSTTRP00000013932/1-411 WANGSAPQPE RRPNGYTLGL LSGGSARESH RDMGLPDVEL LRQELKGERP bmy_15263T0/1-272 WANGSAPQPE RRPNGYTLGL VSGGSARESH RDTGLPDVEL LRQELKREHP BACU017161/1-408 WANGSAPQPE RRPNGYTLGL VSGGSARESH RDTGLPDVEL LRQELKRERP 401 450 ENSBTAP00000029397/1-403 ESPGLGGPRG R--AGVS ENSP00000336630/1-412 EPPGLDDPLA QDGAGVS ENSTTRP00000013932/1-411 ESLGLEGPQA QDGAGVS bmy_15263T0/1-272 ESLGLEGPQA QDGAGVS BACU017161/1-408 ESLGLEGPQA QDGAGVS