KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:39:19 2014 Check: 00 .. Name: ENSP00000351075/1-822 Len: 841 Check: 3051 Weight: 1.00 Name: ENSBTAP00000029404/1-821 Len: 841 Check: 2897 Weight: 1.00 Name: ENSTTRP00000001935/1-820 Len: 841 Check: 7000 Weight: 1.00 Name: bmy_15254T0/1-413 Len: 841 Check: 7751 Weight: 1.00 Name: BACU017157/1-833 Len: 841 Check: 963 Weight: 1.00 // 1 50 ENSP00000351075/1-822 MKPALLPWAL LLLATALGPG PGPTADAQES CSMRCGALDG PCSCHPTCSG ENSBTAP00000029404/1-821 MKPTLLPWAL LLLATVPGPD LWPAAGAQLS CSQRCGDQSG PCSCHPTCFG ENSTTRP00000001935/1-820 MKLSLLPWTL LLLVTAPDPG PWPAAGAQGS CSYRCGVQDG PCSCHPTCFG bmy_15254T0/1-413 ---------- ---------- ---------- ---------- ---------- BACU017157/1-833 MKLSLLPWAL LLLVTAPGPG PRPAAGAQGS CSRRCGVQHG PCSCHPTCFG 51 100 ENSP00000351075/1-822 LGTCCLDFRD FCLEILPYSG SMMGGKDFVV RHFKMSSPTD ASVICRFKDS ENSBTAP00000029404/1-821 LASCCVDIRD FCLEISPYSG SMMGGKDFVV RHLNWPNPAD -SVICSFKES ENSTTRP00000001935/1-820 LASCCSDIRD FCLEILPYSG SIMGGKDFVI QHLNWSNPTD -SVICSFKES bmy_15254T0/1-413 ---------- ---------- ---------- ---------- ---------- BACU017157/1-833 LARCCLDIRD FCLEILPYSG SIMGGKDFVV QHLNWSNSTD -GVICSFKES 101 150 ENSP00000351075/1-822 IQTLGHVDSS GQVHCVSPLL YESGRIPFTV SLDNGHSFPR AGTWLAVHPN ENSBTAP00000029404/1-821 IQTHGYVDAS GRVHCVSPLL YESGRIPFTL SMNNGRSFPR SGTWLSVHPS ENSTTRP00000001935/1-820 IQTRGFVDSS GRVHCVSPLL YETGRIPFTL SMDNGRSFPR SGTWLAVHPX bmy_15254T0/1-413 ---------- ---------- ---------- ---------- ---------- BACU017157/1-833 IQTRGFVDSS GRVHCVSPLL YETGRIPFTL SMDNGHSFPR SGTWLAVHPS 151 200 ENSP00000351075/1-822 KVSMMEKSEL VNETRWQYYG TANTSGNLSL TWHVKSLPTQ TITIELWGYE ENSBTAP00000029404/1-821 KVSDSEKSQL VNETRWQYYG TPGTQGNLTL TWNTSALPSD TVTIELWGYE ENSTTRP00000001935/1-820 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_15254T0/1-413 ---------- ---------- ---------- ---------- ---------- BACU017157/1-833 KVSESEKSQL VNETRWQYYG TASTQGNLTL TWNTLALPTN SITIELWGYE 201 250 ENSP00000351075/1-822 ETGMPYSQEW TAKWSYLYPL ATHIPNSGSF TFTPKPAPPS YQRWRVGALR ENSBTAP00000029404/1-821 ETGKPYSQQW AAAWSYLYSL ATNIHNSGSF TFTPKPAPQN FQRWEVGSLR ENSTTRP00000001935/1-820 XXXKPYSREW TAAWSYLYSL ATSITNSGSF TFTPKPAPQD YQRWKVGALR bmy_15254T0/1-413 ---------- ---------- ---------- ---------- ---------- BACU017157/1-833 ETGKPYSKEW TAAWSYLYSL ATNITNSGSF TFTPKPAPQN YQRWKVGALR 251 300 ENSP00000351075/1-822 IIDSKNYAGQ KDVQALWTND HALAWHLSDD FREDPVAWAR TQCQAWEELE ENSBTAP00000029404/1-821 IVDSRHSAGK PDVQAIWSNE HALAWHLGED FRMDPVAWAR NQCLAWEELE ENSTTRP00000001935/1-820 IVNSKHHAGE KDVHALWSNE HALAWHLGDD FRADPVAWAR AQCLAWEELE bmy_15254T0/1-413 ---------- ---------- ---------- ---------- ---------- BACU017157/1-833 IVNSKHHAGE KDVHALWSNE HALAWHLGDD FRADPVAWAR AQCLAWEELE 301 350 ENSP00000351075/1-822 DQLPNFLEEL PDCPCTLTQA RADSGRF--- ---------- ------FTDY ENSBTAP00000029404/1-821 DQLPTFLEEL PDCPCTLAQA RADSGRF--- ---------- ------HTDY ENSTTRP00000001935/1-820 DQLPNFLEEV PDCPCTLAQA QADSGRF--- ---------- ------QADY bmy_15254T0/1-413 ---------- ---------- ---------- ---------- ---------- BACU017157/1-833 DQLPNFLEEL PDCPCTLAQA QADSGRFQGG DDRAQSQCRG QQPAALQPDY 351 400 ENSP00000351075/1-822 GCDMEQGSVC TYHPGAVHCV RSVQASLRYG SGQQCCYTAD GTQLLTADSS ENSBTAP00000029404/1-821 GCDLEQGSVC TYHPGAVHCV RSVQASPRYY SGQQCCYTAD GTQLLTADST ENSTTRP00000001935/1-820 GCDIEHGSVC TYHPGAVHCV RSVQASPLYG SGQQCCYTAA GTQLLTADST bmy_15254T0/1-413 ---------- ---------- ---------- ---------- ---------- BACU017157/1-833 GCDIEHGSVC TYHPGAVHCV RSVQASPLYG SGQQCFCTAA GTQLLTADST 401 450 ENSP00000351075/1-822 GGSTPDRGHD WGAPPFRTPP RVPSMSHWLY DVLSFYYCCL WAPDCPRYMQ ENSBTAP00000029404/1-821 GGSTPDRGHD WGSPPYRVPP RVPGLSHWIY DVISFYHCCL WAPECFRYMN ENSTTRP00000001935/1-820 SGSTPDRGHD WGAPPYRVPP RVPGLSHWIY DVISFYCCCL WAPECSRYMQ bmy_15254T0/1-413 ---------- ---------- --------MY DVISFYYCCL WAPECSRYMQ BACU017157/1-833 SGSTPDRGHD WGAPPYRVPP RVPGLSHWIY DVISFYYCCL WAPECSRYMQ 451 500 ENSP00000351075/1-822 RRPSNDCRNY RPPRLASAFG DPHFVTFDGT NFTFNGRGEY VLLEAALTDL ENSBTAP00000029404/1-821 RRPSSDCRSY RPPRLASAFG DPHFVTFDGT NFTFNGRGEY VLLEAALTDL ENSTTRP00000001935/1-820 RRPSSDCHSY QPPRLASAFG DPHFVTFDGT NFTFNGRGEY VLLEASGTDL bmy_15254T0/1-413 RRPSSDCRSY QPPRLASTFG DPHFVTFDGT NITFNGRGEY VLLEASGTDL BACU017157/1-833 RRPSSDCRSY QPPRLASTFG DPHFVTFDGT NFTFNGRGEY VLLEASGTDL 501 550 ENSP00000351075/1-822 RVQARAQPGT MSNGTETRGT GLTAVAVQEG NSDVVEVRLA NRTGGLEVLL ENSBTAP00000029404/1-821 RVQARTQTRV TPEGSQDRGT GLTAVAVQEA NSDVVEVRLG DGAGVLQVLL ENSTTRP00000001935/1-820 RLQARAQTRM TPEGSQDRGT GLTAVAVQEG NSDVVKVRLK D-AGALQVLL bmy_15254T0/1-413 RVQARAQTRM TPEGSQDRGT GLTAVAVQEG DSDVVEVRLR DGAGALQVLL BACU017157/1-833 RVQARAQTRM MPEGSQDRGT GLTAVAVQEG NSDVVEVRLR DGAGALQVLL 551 600 ENSP00000351075/1-822 NQEVLSFTEQ SWMDLKGMFL SVAAGDRVSI MLASGAGLEV SVQGPFLSVS ENSBTAP00000029404/1-821 NQEVLSFAEQ RWMDLKGMFL SVAAGNRVSV MLTSEAGLEI SLQGPFLSVA ENSTTRP00000001935/1-820 NQEVLSFKEQ SWMDLKGMFL SVAAGDRVSV MLSSGAGLEV SVQGPFLSVA bmy_15254T0/1-413 NQEVLSFKEQ RWMDLKGMFL SVAAGDRVSV MLSSGAGLEV SVQGPFLSVA BACU017157/1-833 NQEVLSFEEQ RWMDLKSMFL SVAAGDRVSV MLSSGAGLEV SVQGPFLSVA 601 650 ENSP00000351075/1-822 VLLPEKFLTH THGLLGTLNN DPTDDFTLHS GRVLPPGTSP QELFLFGANW ENSBTAP00000029404/1-821 VLLPEKFLTH TQGLLGTFNN DPADDFTLRS GEVLPPSASS RELFRFGADW ENSTTRP00000001935/1-820 VLLPDKFLTH TRGLLGTLND NPSDDFTLRS GQVLPPSASS QELFQFGADW bmy_15254T0/1-413 VLLPNKFLTH TRGLLGTFND NPSDDFTLRS GQVLPPSASS RELFQFGADW BACU017157/1-833 VLLPNKFLTH TRGLLGTLND NPSDDFTLRS GQALPPSASS RELFQFGADW 651 700 ENSP00000351075/1-822 TVHNASSLLT YDSWFLVHNF LYQPKHDPTF EPLFPSETTL NPSLAQEAAK ENSBTAP00000029404/1-821 AVQNASSLLT YDSKFLVENF KERPKHDPTF LPLFPEESSA SPSQASAAAD ENSTTRP00000001935/1-820 AVENASSLLT YDSKFLVENF LLQPKHDPSF LPLFPEETTS SPSQESEAAK bmy_15254T0/1-413 AVENASSLLT YDSKFLVENF LLRPKHDPNF LPLFPEETTS SPSQASEVAK BACU017157/1-833 AVENASSLLT YDSKFLVENF LLRPKHDPNF LPLFPEETTS SPSQASEVAK 701 750 ENSP00000351075/1-822 LCGDDHFCNF DVAATGSLST GTATRVAHQL HQRRMQSLQP VVSCGWLAPP ENSBTAP00000029404/1-821 LCGDDSFCKF DVAATGSLSV GNASRVAHMQ HRLRVQSLQP VVSCGWLAPP ENSTTRP00000001935/1-820 LCGDNNFCNF DVAATGSLSV GNATLLVHRQ HLLRAQSLQP VVSCGWLPPP bmy_15254T0/1-413 LCGDNTFCNF DVAATGSLSV GNATRLVHRQ HLLRAQSLQP VVSCGWLAPP BACU017157/1-833 LCGDNNFCNF DVAATGSLSV GNATRLVHRQ HLLRAQSLQP VVSCGWLAPP 751 800 ENSP00000351075/1-822 PNGQKEGNRY LAGSTIYFHC DNGYSLAGAE TSTCQADGTW SSPTPKCQPG ENSBTAP00000029404/1-821 ANGHKQGERY LVGSTVRFRC NNGYSLAGAD ASTCQADGTW SWPTPTCQPG ENSTTRP00000001935/1-820 SNGHKEGMRY LVGSTVHFHC DSGYSLAGAE ASTCQTDGTW SQPTPTCQRG bmy_15254T0/1-413 SNGHKEGMRY LVGSTVHFHC DSGYSLAGAE ASTCQADGTW SRPTPTCQPG BACU017157/1-833 SNGHKEGMRY LVGSTVHFHC DSGYSLAGAE ASTCQADGTW SLPTPTCQPG 801 850 ENSP00000351075/1-822 RSYAVLLGII FGGLAVVAAV ALVYVLLRRR KGNTHVWGAQ P ENSBTAP00000029404/1-821 RSYAVLLGII FGGLGLVALV GLGYWLLRRR KSNTAVWGSQ P ENSTTRP00000001935/1-820 RSYAVLLGVI FGGLAVVALV ALVYVLLCRR KSNTAVWGSQ P bmy_15254T0/1-413 RSYAVLWGVI FGGLAVVALV ALVYVLLRRR KSNTAVRGSR P BACU017157/1-833 RSYAVLLGVI FGGLAVVALA ALVYVLLRRR KSNT------ -