KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:39:20 2014 Check: 00 .. Name: ENSTTRP00000006462/1-550 Len: 550 Check: 600 Weight: 1.00 Name: ENSP00000263196/1-550 Len: 550 Check: 9427 Weight: 1.00 Name: ENSBTAP00000029411/1-471 Len: 550 Check: 984 Weight: 1.00 Name: bmy_02459T0/1-492 Len: 550 Check: 4277 Weight: 1.00 Name: BACU017112/1-541 Len: 550 Check: 4898 Weight: 1.00 // 1 50 ENSTTRP00000006462/1-550 MVPKADSGAF LLLFLLVLTV TEPLRPELRC NPGQFACRSG AIQCIPLPWQ ENSP00000263196/1-550 MVPKADSGAF LLLFLLVLTV TEPLRPELRC NPGQFACRSG TIQCIPLPWQ ENSBTAP00000029411/1-471 ---------- ---------- ------ELRC SPGQFACRSG AIQCIPLPWR bmy_02459T0/1-492 ---------- ---------- ---------- ---------- -MQAAP-TWN BACU017112/1-541 MCSEVQVAPH PQQPLAFGPT ------ELRC NPGQFACRSG AIQCIPLPWQ 51 100 ENSTTRP00000006462/1-550 CDGLVTCEDE SDEANCPEVI GEARPYHGKE AVDPRPGRAR GGDPTHFHAM ENSP00000263196/1-550 CDGWATCEDE SDEANCPEVT GEVRPHHGKE AVDPRQGRAR GGDPSHFHAV ENSBTAP00000029411/1-471 CDGLATCEDG SDEAACPEVS GQARPYHGKE AADPRPGRAR GSDPSHLHAM bmy_02459T0/1-492 ---LRSC--- -------EVI GEARPYHGKE AVDPRPGRAR GGDPTHFHAM BACU017112/1-541 CDGLVTCEDE SDEANCPEVI GEARPYHGKE AVDPRPGRAR GGDPTHFHAM 101 150 ENSTTRP00000006462/1-550 NVAQPVRFSS FXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000263196/1-550 NVAQPVRFSS FLGKCPTGWH HYEGTASCYR VYLSGENYWD AAQTCQRLNG ENSBTAP00000029411/1-471 SVAQPVRFSS FLGKCPTGWH HYEGTASCYR AYLSGESYWD AAQTCQRVNG bmy_02459T0/1-492 NVAQPVRFSR ---KCPTGWH HYEGTASCYR VYLSGENYWD AAQTCQRVNG BACU017112/1-541 NVAQPVRFSR ---KCPTGWH HYEGTASCYR VYLSGENYWD AAQTCQRVNG 151 200 ENSTTRP00000006462/1-550 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXLWVGYQY VITGRNRSLE ENSP00000263196/1-550 SLATFSTDQE LRFVLAQEWD QPERSFGWKD QRKLWVGYQY VITGRNRSLE ENSBTAP00000029411/1-471 SLATFSTDQE LRFVLAQEWE QPERSFTWQD QHKLWVGYQY VVTGRNRSVE bmy_02459T0/1-492 SLATFSTDQE LRFVLAQEWD QPERSFAWQD QHKLWVGYQY VITGRNRSLE BACU017112/1-541 SLATFSTDQE LRFILAQEWD QPERSFAWQD QHKLWVGYQY IITGRNRSLE 201 250 ENSTTRP00000006462/1-550 GHWEVAFKGS SEVLLPPDPI FAAATSEGDG VFCAQLQCFH FPTLRHHDLH ENSP00000263196/1-550 GRWEVAFKGS SEVFLPPDPI FASAMSENDN VFCAQLQCFH FPTLRHHDLH ENSBTAP00000029411/1-471 GHWEVASKGS SEVLLPPDPI LAAATAEGDG VFCAQLQCFH FPTLRHHDLH bmy_02459T0/1-492 GHWEVAFKGS SEVLLPPDPI FAAATSEGDG VFCAQLQCFH FPTLRHHDLH BACU017112/1-541 GHWEVAFKGS SEVLLPPDPI FAAATSEGDG VFCAQLQCFH FPTLRHHDLH 251 300 ENSTTRP00000006462/1-550 SWHAESCHDK SSFLCKRSQT CVDIKDNVVD EGFYFTPKGD DPCLSCTCHR ENSP00000263196/1-550 SWHAESCYEK SSFLCKRSQT CVDIKDNVVD EGFYFTPKGD DPCLSCTCHG ENSBTAP00000029411/1-471 SWRAESCQDK SSFLCKRSQT CVDIKDNVVD EGFYFTPKGD DPCLSCTCHG bmy_02459T0/1-492 SWHAESCHDK SSFLCKRSQT CVDIKDNVVD EGFYFTPKGD DPCLSCTCHR BACU017112/1-541 SWHAESCHDK SSFLCKRSQT CVDIKDNVVD EGFYFTPKGD DPCLSCTCHR 301 350 ENSTTRP00000006462/1-550 GEPEMCVAAL CERPQGCQQY RKDPKECCKF MCLDPDGSSL LDSMASGMRL ENSP00000263196/1-550 GEPEMCVAAL CERPQGCQQY RKDPKECCKF MCLDPDGNSL FDSMASGMRL ENSBTAP00000029411/1-471 GEPEMCVAAL CERPQGCQQY RKDPKECCKF MCLDPDGGSL LDSMASGMRL bmy_02459T0/1-492 GEPEMCVAAL CERPQGCQQY RKDPKECCKF MCLDPDGSSL LDSMASGMRL BACU017112/1-541 GEPEMCVAAL CERPQGCQQY RKDPKECCKF MCLDPDGSSL LDSMASGMRL 351 400 ENSTTRP00000006462/1-550 IVSCVSSFLI LSLLLFMVHR LRQRRRERIE SLIGANLHHF NLGRRIPGFD ENSP00000263196/1-550 VVSCISSFLI LSLLLFMVHR LRQRRRERIE SLIGANLHHF NLGRRIPGFD ENSBTAP00000029411/1-471 VVSCVSSFLV LSLLLFMVHR LRQRRRERIE SLIGANLHHF NLGRRIPGFD bmy_02459T0/1-492 IVSCVSSFLI LSLLLFMVHR LRQRRRERIE SLIGANLHHF NLGRRIPGFD BACU017112/1-541 IVSCVSSFLI LSLLLFMVHR LRQRRRERIE SLIGANLHHF NLGRRIPGFD 401 450 ENSTTRP00000006462/1-550 YGPDGFGTGL TPLHLSDDGE GGTFHFHDPP PPYTAYKYPD IDQPDDPPPP ENSP00000263196/1-550 YGPDGFGTGL TPLHLSDDGE GGTFHFHDPP PPYTAYKYPD IGQPDDPPPP ENSBTAP00000029411/1-471 YGPDGFGTGL TPLHLSDDGE GGTFHFHDPP PPYTAYKYPD IDQPDDPPPP bmy_02459T0/1-492 YGPDGFGTGL TPLHLSDDGE GGTFHFHDPP PPYTAYKYPD IDQPDDPPPP BACU017112/1-541 YGPDGFGTGL TPLHLSDDGE GGTFHFHDPP PPYTAYKYPD IDQPDDPPPP 451 500 ENSTTRP00000006462/1-550 YEASINPDSM FYDPADDDAF EPAEAAQLTT GDGGGEGAAP RRLEQPLPTP ENSP00000263196/1-550 YEASIHPDSV FYDPADDDAF EPVEVSLPAP GDGGSEGALL RRLEQPLPTA ENSBTAP00000029411/1-471 YEASINPDSV FYDPAEDDAF EPVEAAPPAT GDGSREGTVP RRPER---TP bmy_02459T0/1-492 YEASINPDSM FYDPADDDAF EPAEAAPPTT GDGGGEGAAP RLLEQPLPTP BACU017112/1-541 YEASINPDSM FYDPADDDAF EPAEAAPPTT GDGGGEGAAP RRLEQPLPTP 501 550 ENSTTRP00000006462/1-550 RASLAELEDS ADSSSVLLVP PDPAQSGSAL TTEALPGGGR HSRSSLNTVV ENSP00000263196/1-550 GASLADLEDS ADSSSALLVP PDPAQSGSTP AAEALPGGGR HSRSSLNTVV ENSBTAP00000029411/1-471 ---------- ---------- ---------- ---------- ---------- bmy_02459T0/1-492 RASLAELEDS ADSSSVLLVP PDPAQSGSAL ATEALPGGGR RSRSSLNTVV BACU017112/1-541 RASLAELEDS ADSSSVLLVP PDPAQSGSAL ATEALPGGGR HSRSSLNTVV