KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:39:21 2014 Check: 00 .. Name: ENSP00000266269/1-687 Len: 765 Check: 2786 Weight: 1.00 Name: ENSBTAP00000029432/1-687 Len: 765 Check: 2880 Weight: 1.00 Name: BACU003315/1-719 Len: 765 Check: 137 Weight: 1.00 Name: ENSTTRP00000009750/1-687 Len: 765 Check: 2773 Weight: 1.00 Name: bmy_01583T0/1-641 Len: 765 Check: 2097 Weight: 1.00 // 1 50 ENSP00000266269/1-687 MERVNDASCG PSGCYTYQVS RHSTEMLHNL NQQRKNGGRF CDVLLRVGDE ENSBTAP00000029432/1-687 MERVNDASCG PSGCYTYQVS RHSTEMLHNL NQQRKNGGRF CDVLLRVGDE BACU003315/1-719 MERVNDASCG PSGCYTYQVS RHSTEMLHNL NQQRKNGGRF CDVLLRVGDE ENSTTRP00000009750/1-687 MERVNDASCG PSGCYTYHVS RHSTEMLHNL NQQRKNGGRF CDVLLRVGDE bmy_01583T0/1-641 MERVNDASCG PSGCYTYQVS RHSTEMLHNL NQQRKNGGRF CDVLLRVGDE 51 100 ENSP00000266269/1-687 SFPAHRAVLA ACSEYFESVF SAQLGDGGAA DGGPADVGGA TAAPGGGAGG ENSBTAP00000029432/1-687 SFPAHRAVLA ACSEYFESVF SAQLGDGGAA DGGPADVGGA AAAPGGGAGG BACU003315/1-719 SFPAHRAVLA ACSEYFESVF SAQLGDGGAA DGGPADVGGA AAAPGGGAGG ENSTTRP00000009750/1-687 SFPAHRAVLA ACSEYFESVF SAQLGDGGAA DGGPADVGGA AAAPGGGAGG bmy_01583T0/1-641 SFPAHRAVLA ACSEYFESVF SAQLGDGGAA DGGPADVGGA AAAPGGGAGG 101 150 ENSP00000266269/1-687 SRELEMHTIS SKVFGDILDF AYTSRIVVRL ESFPELMTAA KFLLMRSVIE ENSBTAP00000029432/1-687 SRELEMHTIS SKVFGDILDF AYTSRIVVRL ESFPELMTAA KFLLMRSVIE BACU003315/1-719 SRELEMHTIS SKVFGDILDF AYTSRIVVRL ESFPELMTAA KFLLMRSVIE ENSTTRP00000009750/1-687 SRELEMHTIS SKVFGDILDF AYTSRIVVRL ESFPELMTAA KFLLMRSVIE bmy_01583T0/1-641 SRELEMHTIS SKVFGDILDF AYTSRIVVRL ESFPELMTAA KFLLMRSVIE 151 200 ENSP00000266269/1-687 ICQEVIKQSN VQILVPPARA DIMLFRPPGT SDLGFPLDMT NGAALAANSN ENSBTAP00000029432/1-687 ICQEVIKQSN VQILVPPARA DIMLFRPPGT SDLGFPLDMT NGAALAANSN BACU003315/1-719 ICQEVIKQSN VQILVPPARA DIMLFRPPGT SDLGFPLDMT NGAALAANSN ENSTTRP00000009750/1-687 ICQEVIKQSN VQILVPPARA DIMLFRPPGT SDLGFPLDMT NGAALAANSN bmy_01583T0/1-641 ICQEVIKQSN VQILVPPARA DIMLFRPPGT SDLGFPLDMT NGAALAANSN 201 250 ENSP00000266269/1-687 GIAGSMQPEE EAARAAGAAI AGQASLPVLP GVDRLPMVAG PLSPQLLTSP ENSBTAP00000029432/1-687 GIAGSMQPEE EAARAAGAAI ASQASLPVLP GVDRLPMVAG PLSPQLLTSP BACU003315/1-719 GIAGSMQPEE EAARAAGAAI ASQASLPVLP GVDRLPMVAG PLSPQLLTSP ENSTTRP00000009750/1-687 GIAGSMQPEE EAARAAGAAI ASQASLPVLP GVDRLPMVAG PLSPQLLTSP bmy_01583T0/1-641 GIAGSMQPEE EAARAAGAAI ASQASLPVLP GVDRLPMVAG PLSPQLLTSP 251 300 ENSP00000266269/1-687 FPSVASSAPP LTGKRGRGRP RKANLLDSMF GSPGGLREAG ILPCGLCGKV ENSBTAP00000029432/1-687 FPNVASSAPP LTGKRGRGRP RKANLLDSMF GSPGGLREAG ILPCGLCGKV BACU003315/1-719 FPNVASSAPP LTGKRGRGRP RKANLLDSMF GSPGGLREAG ILPCGLCGKV ENSTTRP00000009750/1-687 FPNVASSAPP LTGKRGRGRP RKANLLDSMF GSPGGLREAG ILPCGLCGKV bmy_01583T0/1-641 FPNVASSAPP LTGKRGRGRP RKANLLDSMF GSPGGLREAG ILPCGLCGKV 301 350 ENSP00000266269/1-687 FTDANRLRQH EAQHGVTSLQ LGYIDLPPPR LGENGLPISE DPDGPRKRSR ENSBTAP00000029432/1-687 FTDANRLRQH EAQHGVTSLQ LGYIDLPPPR LGENGLPISE DPDGPRKRSR BACU003315/1-719 FTDANRLRQH EAQHGVTSLQ LGYIDLPPPR LGENGLPISE DPDGPRKRSR ENSTTRP00000009750/1-687 FTDANRLRQH EAQHGVTSLQ LGYIDLPPPR LGENGLPISE DPDGPRKRSR bmy_01583T0/1-641 FTDANRLRQH EAQHGVTSLQ LGYIDLPPPR LGENGLPISE DPDGPRKRSR 351 400 ENSP00000266269/1-687 TRKQVACEIC GKIFRDVYHL NRHKLSHSGE KPYSCPVCGL RFKRKDRMSY ENSBTAP00000029432/1-687 TRKQVACEIC GKIFRDVYHL NRHKLSHSGE KPYSCPVCGL RFKRKDRMSY BACU003315/1-719 TRKQVACEIC GKIFRDVYHL NRHKLSHSGE KPYSCPVCGL RFKRKDRMSY ENSTTRP00000009750/1-687 TRKQVACEIC GKIFRDVYHL NRHKLSHSGE KPYSCPVCGL RFKRKDRMSY bmy_01583T0/1-641 TRKQVACEIC GKIFRDVYHL NRHKLSHSGE KPYSCPVCGL RFKRKDRMSY 401 450 ENSP00000266269/1-687 HVRSHDGSVG KPYICQSCGK GFSRPDHLNG HIKQVHTSER PHKCQTCNAS ENSBTAP00000029432/1-687 HVRSHDGSVG KPYICQSCGK GFSRPDHLNG HIKQVHTSER PHKCQTCNAS BACU003315/1-719 HVRSHDGSVG KPYICQSCGK GFSRPDHLNG HIKQVHTSER PHKCQTCNAS ENSTTRP00000009750/1-687 HVRSHDGSVG KPYICQSCGK GFSRPDHLNG HIKQVHTSER PHKCQTCNAS bmy_01583T0/1-641 HVRSHDGSVG KPYICQSCGK GFSRPDHLNG HIKQVHTSER PHKCQTCNAS 451 500 ENSP00000266269/1-687 FATRDRLRSH LACHEDKVPC QVCGKYLRAA YMADHLKKHS EGPSNFCSIC ENSBTAP00000029432/1-687 FATRDRLRSH LACHEDKVPC QVCGKYLRAA YMADHLKKHS EGPSNFCSIC BACU003315/1-719 FATRDRLRSH LACHEDKVPC QVCGKYLRAA YMADHLKKHS EGPSNFCSIC ENSTTRP00000009750/1-687 FATRDRLRSH LACHEDKVPC QVCGKYLRAA YMADHLKKHS EGPSNFCSIC bmy_01583T0/1-641 FATRDRLRSH LACHEDKVPC QVCGKYLRAA YMADHLKKHS EGPSNFCSIC 501 550 ENSP00000266269/1-687 NRGFSSASYL KVHVKTHHGV PLPQVSRHQE PILNGGAAFH CARTYGNKEG ENSBTAP00000029432/1-687 NRGFSSASYL KVHVKTHHGV PLPQVSRHQE PIPNGGAAFH CARTYGNKEG BACU003315/1-719 NR-------- ---------- ---------- ---------- --------EG ENSTTRP00000009750/1-687 NRGFSSASYL KVHVKTHHGV PLPQVSRHQE PIPNGGAAFH CARTYGNKEG bmy_01583T0/1-641 NR-------- ---------- ---------- ---------- --------EG 551 600 ENSP00000266269/1-687 QKCSHQDPIE SSDSYGDLSD ASDLKTPEKQ SANGSFSCDM AVPKNKMESD ENSBTAP00000029432/1-687 QKCSHQDPIE SSDSYGDLSD ASDLKTPEKQ STNGSFSCDM AVPKNKMESD BACU003315/1-719 QKCSHQDPIE SSDSYGDLSD ASDLKTPEKQ STNGSFSCDM AVPKNKMESD ENSTTRP00000009750/1-687 QKCSHQDPIE SSDSYGDLSD ASDLKTPEKQ STNGSFSCDM AVPKNKMESD bmy_01583T0/1-641 QKCSHQDPIE SSDSYGDLSD ASDLKTPEKQ STNGSFSCDM AVPKNKMESD 601 650 ENSP00000266269/1-687 GEKKYPCPEC GSFFRSKSYL NKHIQKVHVR ALGGPLGDLG PALGSPFSPQ ENSBTAP00000029432/1-687 GEKKYPCPEC GSFFRSKSYL NKHIQKVHVR ALGGPLGDLG PALGSPFSPQ BACU003315/1-719 GEKKYPCPEC GSFFRSKSYL NKHIQKVHVR ALGGPLGDLG PALGSPFSPQ ENSTTRP00000009750/1-687 GEKKYPCPEC GSFFRSKSYL NKHIQKVHVR ALGGPLGDLG PALGSPFSPQ bmy_01583T0/1-641 GEKKYPCPEC GSFFRSKSYL NKHIQKVHVR ALGGPLGDLG PALGSPFSPQ 651 700 ENSP00000266269/1-687 QNMSLLESFG FQIVQSAFAS SLVDPEVDQQ PMGPEGK--- ---------- ENSBTAP00000029432/1-687 QNMSLLESFG FQIVQSAFAS SLVDPEVDQQ PLGPEGK--- ---------- BACU003315/1-719 QNMSLLESFG FQIVQSAFAS SLVDPEVDQQ PLGPEGKYHS RVCAHLHNAD ENSTTRP00000009750/1-687 QNMSLLESFG FQIVQSAFAS SLVDPEVDQQ PMGPEGK--- ---------- bmy_01583T0/1-641 QNMSLLESFG FQIVQSAFAS SLVDPEVDQQ PMGPEGK--- ---------- 701 750 ENSP00000266269/1-687 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000029432/1-687 ---------- ---------- ---------- ---------- ---------- BACU003315/1-719 AQLFLRKLEA YSIPWTMGTW LRLQSYATRG TYMQLPRSGQ QGEPGKSRLQ ENSTTRP00000009750/1-687 ---------- ---------- ---------- ---------- ---------- bmy_01583T0/1-641 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000266269/1-687 ---------- ----- ENSBTAP00000029432/1-687 ---------- ----- BACU003315/1-719 LDRSGGEAQV CCQNQ ENSTTRP00000009750/1-687 ---------- ----- bmy_01583T0/1-641 ---------- -----