KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:39:25 2014 Check: 00 .. Name: ENSP00000449841/1-269 Len: 276 Check: 1810 Weight: 1.00 Name: ENSBTAP00000029525/1-269 Len: 276 Check: 6337 Weight: 1.00 Name: bmy_13620T0/1-245 Len: 276 Check: 5662 Weight: 1.00 Name: ENSTTRP00000015810/1-269 Len: 276 Check: 4725 Weight: 1.00 // 1 50 ENSP00000449841/1-269 -------MKT PVELAVSGMQ TLGLQHRCRG GYRVKARTSY VDETLFGSPA ENSBTAP00000029525/1-269 -------MKT PVELAISGMQ TLHVQHRGRS GYRVKVRPSY VDETLFGSPA bmy_13620T0/1-245 MLRTMSSVKT PVELAVSGMQ TLHVQHRCRG SCRVKVRPSY VDETLFGSPA ENSTTRP00000015810/1-269 -------VKT PVELAVSGMQ TLHIQHRCRG SCRVKVRPSY VDETLFGSPA 51 100 ENSP00000449841/1-269 GTRPTPPDFD PPWVEKANRT RGVGKEASKA LGAKGSCETT PSRGSTPTLT ENSBTAP00000029525/1-269 GTRPVPPDFD PPWMKKANRS RGVGTGVSQA LGANGSCEST SSSGSTPTLT bmy_13620T0/1-245 GTQPTPPVFD PPWMRKASRT RGVGTGA--- ---------- ---------- ENSTTRP00000015810/1-269 GTQPTPPAFD PPWMGKANRT RRVGTGASQA SGANGSCETT SSRDKTLTLA 101 150 ENSP00000449841/1-269 PRKKNKYRPI SHTPSYCDES LFGSRSEGAS FGAPRMAKGD AAKLRALLWT ENSBTAP00000029525/1-269 PRKKNKYRLI SHTPSYCDES LFGSRQEGAG WEAKWMARGD AAKLHALFWT bmy_13620T0/1-245 --------LI GHTPSYCDES LFGSRPEGAG WEAPWMAKGD AAKLHALFWT ENSTTRP00000015810/1-269 PRKKNKYRLI GHTPSYCDES LFGSRPEGAG WEASWMAKGD AAKLHALFWT 151 200 ENSP00000449841/1-269 PPPTPRGSHS PRPREAPLRA IHPAGPSKTE PGPAADSQKL SMGGLHSSRP ENSBTAP00000029525/1-269 PPATPRGSHS PRPRETPVRC VHPADLSKTE HRVMASSRRL SVDGLDTPRP bmy_13620T0/1-245 PPATPRGSHS PRPRETPVRA IHPAGPSKTE RRVVADSRRL SVDGLDSPRP ENSTTRP00000015810/1-269 PPATPRGSHS PRPRETPVRA IHPASPSKTE RRVVADSRRL SVDGLDSPRP 201 250 ENSP00000449841/1-269 LKRGLSHSLT HLNVPSTGHP ATSAPHTNGP QDLRPSTSGV TFRSPLVTSR ENSBTAP00000029525/1-269 LRRERSHSLT HPNVPSTGHT PASSPCTSGP RDPRPAPSGV TFRSPLVTPR bmy_13620T0/1-245 PRRERSYSLT HLNVPSTSHP PTSTPCTNGP RDPRPSPSGV TFRSPLVTPR ENSTTRP00000015810/1-269 PRRERSYSLT HLNVPSTSHP PTSTPCTNGP RDPRPSPSGV TFRSPLVTPR 251 300 ENSP00000449841/1-269 ARSVSISVPS TPRRGGATQK PKPPWK ENSBTAP00000029525/1-269 AGSVSVSVPT TPRQGGATQK TKPPWK bmy_13620T0/1-245 AHSVSVSVPV TPRRGGATQK PKPPWK ENSTTRP00000015810/1-269 AHSVSVSVPV TPRRGGAIQK PKPPWK