KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:39:26 2014 Check: 00 .. Name: ENSP00000299732/1-347 Len: 459 Check: 4382 Weight: 1.00 Name: ENSBTAP00000029526/1-444 Len: 459 Check: 8970 Weight: 1.00 Name: bmy_13619T0/1-456 Len: 459 Check: 9934 Weight: 1.00 Name: BACU003441/1-459 Len: 459 Check: 9690 Weight: 1.00 // 1 50 ENSP00000299732/1-347 MALDILAMAP LYQAPAINRI GPKTDPSKRP ADPLKPLVLS RTKLTTIEAK ENSBTAP00000029526/1-444 MALDVLTVAP LYQGPDINKI RLIAQTTKKS TIPPKALTPA RSKLTTIETK bmy_13619T0/1-456 MALDVLAVAP LYQDPDVNKV RLIAQTTKKS TTPPKPLPPT KTKLTTIETK BACU003441/1-459 MALDVLAVAP LYQDPDVNKV RLIAQTTKKS TTPPKPLPPT KTKLTTIETK 51 100 ENSP00000299732/1-347 RIMSILDEAI YKVELVTLLS YVASNREDME GMLGEDVMRA VREHEDLCQV ENSBTAP00000029526/1-444 RIMSVLDETI HKVELVSLLS HAASESKTSE GMLGPDIAKA VREHEDLCQA bmy_13619T0/1-456 RIMSVLDETI HKVELVTLLS YVASSSKNSE GMLGEDIMKA VREHEDLCQI BACU003441/1-459 RIMSVLDETI HKVELVTLLS NVASSSKNSE GMLGEDIMKA VREQEDLCQI 101 150 ENSP00000299732/1-347 LLENVRCLKE KERQLQEQKE AEEEGWLRDR LLSIELQKSS LSPLMQQIKD ENSBTAP00000029526/1-444 LLDRVSYLQE EERKLQEAED FEDEAWFRER LFAMDLQKSQ LPPLMQEIKE bmy_13619T0/1-456 LLDRVNYLQE EERQLQEEEE FEDEPWFRDR VLSIEVQKSH LPPLMQQIKG BACU003441/1-459 LLDRVNYLQE EERQLQEEEE FKDELWFRDR VLSIKVQKSH LPPLMQRIKG 151 200 ENSP00000299732/1-347 STKNVLRLLL SNPQAARLLQ MQTQGRSAEA QNFIDSLIEL RGFLFEKLLT ENSBTAP00000029526/1-444 STKNVVRLLL SNPQAASLLQ AQTLGRSKEA QCFIDSLVEL RGFLFEKLLT bmy_13619T0/1-456 STKTVVRLLL SNPQAASLLQ VQTLGRSAEA QSFIDSLVEL RGFLFEKLLT BACU003441/1-459 STKNVVRLLL SNPQAASLLQ VQTLGRSAEA QSFIDSLVEL RGFLFEKLLT 201 250 ENSP00000299732/1-347 SPMEARDKAQ FLQDISRQNS NNQQIIDTLE KELAERMKNR NAE------- ENSBTAP00000029526/1-444 SPMEARDKIQ FIQDITRRNR RHQEIIDTLE NELAACVRNR NAEVEKENFV bmy_13619T0/1-456 SPMEARDKTQ FIQDITRRNQ RNQEIIDTLE NELAACMRNR DAEVEKENFV BACU003441/1-459 SPMEARDKTQ FIQDITRRNQ RNQEIIDTLE NELAACMRNR DAEVEKENFV 251 300 ENSP00000299732/1-347 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000029526/1-444 IQELKNHLHQ VLRFSENSLL RTKQEAEKQQ KADFRASQAR VATVQQEILV bmy_13619T0/1-456 IQELKNHLHQ VLRFSENSLL RTKQEAERRQ KADFRASQAR VAKIQQEILM BACU003441/1-459 IQELKNHLHQ VLRFSENSLL RTKQEAERRQ KADFRASQAR VAKIQQEILL 301 350 ENSP00000299732/1-347 ---------- ---------- ---------- ---------- -----EELED ENSBTAP00000029526/1-444 LQSQFYNLVM ENRDTEQALR KKKYKVETEI ENWIQKYDSE MSEKQDEYEE bmy_13619T0/1-456 LRSQFNSLVT ENRQAEQALR KKKYKVETEI ENWIQKYDLE MSEKQEEYEE BACU003441/1-459 LRSQFNSLVM ENRQAEQALR KKKYKVETEI ENWIQKYDLE MSEKQDEYEE 351 400 ENSP00000299732/1-347 LDAVHREEKI SLEELRRRHK VLVGEFAQIR EEREINSKKR MEAEQEMVRM ENSBTAP00000029526/1-444 LDIIHKEEQL QLEELKKRHD VLVEEFSQIQ AEREILTKKR LEDEQEMVRM bmy_13619T0/1-456 LDVIHKEEKL QLEELKKRHD VLVEEFSQIQ AEQEISAKKR LEAEQEMVHM BACU003441/1-459 LDVIHKEEKL QLEELKRRHD VLVEEFSQIQ AEQEINAKKR LEAEQEMVHM 401 450 ENSP00000299732/1-347 VRAATLIQAL WKGYLVRSLL RSKKKRG--- -----KGKAK DKEKGKQKG- ENSBTAP00000029526/1-444 VRAATLIQAL WKGYLVRSML KSKKKKR--- ------GKGK GEKKG----- bmy_13619T0/1-456 VRAATLIQAL WKGYLVRSML RSKKRRRSKS KVK-EKGKGK GKEKGKEKG- BACU003441/1-459 VRAATLIQAL WKGYLVRSML RSKKRKRSKS KVKEEKGKGK GKEKGKEKGK 451 500 ENSP00000299732/1-347 -KEKGKGKK ENSBTAP00000029526/1-444 -KGKGKGKK bmy_13619T0/1-456 -KGKGKGKK BACU003441/1-459 EKGKGKGKK