KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:39:29 2014 Check: 00 .. Name: ENSP00000257548/1-517 Len: 517 Check: 4835 Weight: 1.00 Name: ENSBTAP00000029563/1-517 Len: 517 Check: 3201 Weight: 1.00 Name: ENSTTRP00000007655/1-516 Len: 517 Check: 3968 Weight: 1.00 Name: BACU008376/1-419 Len: 517 Check: 2403 Weight: 1.00 Name: bmy_08275T0/1-490 Len: 517 Check: 1484 Weight: 1.00 // 1 50 ENSP00000257548/1-517 MLSSRAEAAM TAADRAIQRF LRTGAAVRYK VMKNWGVIGG IAAALAAGIY ENSBTAP00000029563/1-517 MLSSRASAAM TAADRAIQRF LRTGAAVRYK VMKNWGVIGG IAAALAAGIY ENSTTRP00000007655/1-516 MLSCRAEAAM TAADRAIQRF LRTGAAVRYK LMKNWGVIGG IAAALAAGIY BACU008376/1-419 ---------- ---------- ---------- -MKNWGVIGG IAAALAEGIY bmy_08275T0/1-490 MLSSRAEAAM TAADRALQRF LRTGAAVRYK VMKNWGVIGG IAAALAAGIY 51 100 ENSP00000257548/1-517 VIWGPITERK KRRKGLVPGL VNLGNTCFMN SLLQGLSACP AFIRWLEEFT ENSBTAP00000029563/1-517 VIWGPITERK KRRKGLVPGL VNLGNTCFMN SLLQGLSACP TFIKWLEEFT ENSTTRP00000007655/1-516 VIWGPITERK KRRKGLVPGL VNLGNTCFMN SLLQGLSACP TFIKWLEEFT BACU008376/1-419 VIWGPITERK KRRKGLVPGL VNLGNTCFMN SLLQGLSACP TFIKWLEEFT bmy_08275T0/1-490 VIWGPITERK KRRKGLVPGL VNLGNTCFMN SLLQGLSACP TFIKWLEEFT 101 150 ENSP00000257548/1-517 SQYSRDQKEP PSHQYLSLTL LHLLKALSCQ EVTDDEVLDA SCLLDVLRMY ENSBTAP00000029563/1-517 TQYTGGHKEP PQHQYLSLTL LHLLKALSCQ EVTDEEVLDA SCLLDVLRMY ENSTTRP00000007655/1-516 TQYTRGQEES PQQQRLSLTL LRLLKALSCQ EVTDEEVLDA SCLLDVLRMY BACU008376/1-419 TQYTRDQKEC PQHQYLSLTL LRLLKALSCQ EVTDEEVLDA SCLLDVLRMY bmy_08275T0/1-490 TQYTRDRKEC PQHQYLSLTL LHLLKALSCQ EVTDEEVLDA SCLLDVLRMY 151 200 ENSP00000257548/1-517 RWQISSFEEQ DAHELFHVIT SSLEDERDRQ PRVTHLFDVH SLEQQSEITP ENSBTAP00000029563/1-517 RWQISSFEEQ DAHELFHVIT SSLEDERDRQ PRVTHLFDVH SLEQQTEITP ENSTTRP00000007655/1-516 RWQISSFEEQ DAHELFHVIT SSLEDERDHQ PRVTHLFDVH SLEQQSEMTP BACU008376/1-419 RWQISSFEEQ DAHELFHVIT SSLEDERDHQ PRVTHLFDVH SLE------- bmy_08275T0/1-490 RWQISSFEEQ DAHELFHVIT SSLEDERDHQ PRVTHLFDVH SLEQQSEVTP 201 250 ENSP00000257548/1-517 KQITCRTRGS PHPTSNHWKS QHPFHGRLTS NMVCKHCEHQ SPVRFDTFDS ENSBTAP00000029563/1-517 RQITCRTRGS PHPTSNHWKS QHPFHGRLTS NMVCKHCEHQ SPVRFDTFDS ENSTTRP00000007655/1-516 RQITCHTRGS PHPTSSHWKS QHPFHGRLTS NMVCKHCEHQ SPVRFDTFDS BACU008376/1-419 ---------- ---------- ---------- ---------- ---------- bmy_08275T0/1-490 RQITCRTRGS PHPTSNHWKS QHPFHGRLTS NMVCKHCEHR SPVRFDTFDS 251 300 ENSP00000257548/1-517 LSLSIPAATW GHPLTLDHCL HHFISSESVR DVVCDNCTKI EAKGTLNGEK ENSBTAP00000029563/1-517 LSLSIPASTW GHPLTLDHCL HHFISSESVR DVVCDNCTKI EAKGTLNGEK ENSTTRP00000007655/1-516 LSLSIPAATW GHPLTLDHCL HHFISSESVR DVVCDNCTKI -AEGSLVGEX BACU008376/1-419 ---------- GHPLTLDHCL HHFISSESVR DVVCDNCTKI EAKGTLNGEK bmy_08275T0/1-490 LSLSIPAATW GHPLTLDHCL HHFISSESVR DVVCDNCT-- ---------- 301 350 ENSP00000257548/1-517 VEHQRTTFVK QLKLGKLPQC LCIHLQRLSW SSHGTPLKRH EHVQFNEFLM ENSBTAP00000029563/1-517 VEHQRTTFVK QLKLGKLPQC LCIHLQRLSW SSHGTPLKRH EHVQFGEFLM ENSTTRP00000007655/1-516 XEHQRTTFVK QLKLGKLPQC LCIHLQRLSW SSHGTPLKRH EHVQFNEFLM BACU008376/1-419 VEHQRTTFVK QLKLGKLPQC LCIHLQRLSW SSHGTPLKRH EHVQFNEFLM bmy_08275T0/1-490 ---------- -----KLPQC LCIHLQRLSW SSHGTPLKRH EHVQFNEFLM 351 400 ENSP00000257548/1-517 MDIYKYHLLG HKPSQHNPKL NKNPGPTLEL QDGPGAPTPV LNQPGAPKTQ ENSBTAP00000029563/1-517 MDIYKYHLLG HKPGHRSPKQ CEKAGPALEL QDGPAAPKSV RNHPGGPKTQ ENSTTRP00000007655/1-516 MDIYKYHLLG HKPVHRSPEL HEKAGPALEL QDGPAAPKPV RSHPGGPKTQ BACU008376/1-419 MDIYKYRLLG HKPGHRSPEL HEKAGPALEL QDGPAAPKPV RNPPGGTKTQ bmy_08275T0/1-490 MDIYKYHLLG HKPGHRSPEL HEKAGPALEL QDGPAAPKPV RNPPGGTKTQ 401 450 ENSP00000257548/1-517 IFMNGACSPS LLPTLSAPMP FPLPVVPDYS SSTYLFRLMA VVVHHGDMHS ENSBTAP00000029563/1-517 IFMNGACSPS LLPALPTPMP FPLPAVPDYS SSTYLFQLMA VVVHHGDMHS ENSTTRP00000007655/1-516 IFMNGACSPS FLPTLPTPMP FPLPAVPDYS SSTYLFQLVA VVVHHGDMHS BACU008376/1-419 ILMNGACSPS FLPTLPSPMP FPLPAVPDYS ASAYLFQLVA VVVHHGDMHS bmy_08275T0/1-490 IFMNGACSPS FLPTLPTPMP FPLPAVPDYS ASAYLFQLVA VVVHHGDMHS 451 500 ENSP00000257548/1-517 GHFVTYRRSP PSARNPLSTS NQWLWVSDDT VRKASLQEVL SSSAYLLFYE ENSBTAP00000029563/1-517 GHFVTYRRSP PSAKNPVSAS SQWLWVSDDT VRKASLQEVL SSSAYLLFYE ENSTTRP00000007655/1-516 GHFVTYRRSP PSAKNPLSTS NQWLWISDDT VRKASLQEVL SSSAYLLFYE BACU008376/1-419 GHFVTYRRSP PSAKNPLSTS NQWLWISDDT VRKASLQEVL SSSAYLLFYE bmy_08275T0/1-490 GHFVTYRRSP PSAKNPLSTS NQWLWISDDT VRKASLQEVL SSSAYLLFYE 501 550 ENSP00000257548/1-517 RVLSRMQHQS QECKSEE ENSBTAP00000029563/1-517 RVLSKMQPQG REYKSEE ENSTTRP00000007655/1-516 RVLSKMQHQS QECKSEE BACU008376/1-419 RVLSKMQHQS QERKSEE bmy_08275T0/1-490 RVLSKMQHQS QERKSEE