KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:39:29 2014 Check: 00 .. Name: ENSP00000228463/1-428 Len: 492 Check: 614 Weight: 1.00 Name: ENSBTAP00000029577/1-427 Len: 492 Check: 5806 Weight: 1.00 Name: ENSTTRP00000003804/1-413 Len: 492 Check: 9393 Weight: 1.00 Name: bmy_08267T0/1-470 Len: 492 Check: 5229 Weight: 1.00 Name: BACU018833/1-430 Len: 492 Check: 9560 Weight: 1.00 // 1 50 ENSP00000228463/1-428 MAVGASGLEG DKMAGAMPLQ LLLLLILLGP GNSLQLWDTW ADEAEKALGP ENSBTAP00000029577/1-427 ---------- ------MFLQ LLLLLALLGP GSSHQLGETS TNETVKAPGP ENSTTRP00000003804/1-413 ---------- ------MFLK LLLLLALLGP GSSLQLWETW EDGTKEAPGP bmy_08267T0/1-470 ---------- ------MFLK LLLLLALLGP GSSLQLWETW EDAAEEAPGP BACU018833/1-430 ---------- ------MFLK LLLLLALLGP GSSLQLWETL EDGAEEAPGP 51 100 ENSP00000228463/1-428 LLARDRRQAT EYEYLDYDFL PETEPPEMLR NSTDTTPLT- ---------- ENSBTAP00000029577/1-427 LYPGEERDPE DDE--DYDYI GQTDPPEMLD NITEVPKFLP MVTTLGQRES ENSTTRP00000003804/1-413 LLVRGRREVD EDDSDIYDYD IQTDPPEMLN YSTEAPKLLP ---------- bmy_08267T0/1-470 LLVRGRREVD EDDSDIYDYD IQTDPPEMLN YSTEAPKLLP VKGPLEQRES BACU018833/1-430 LRVRGRREVD EDDSDIYDYD IQTDPPEMLN YSTEAPKLLP VMGTLEQRAS 101 150 ENSP00000228463/1-428 -GPGTPESTT VEPAARRSTG LDAGGAVT-E LTTELANMGN LSTDSAA--- ENSBTAP00000029577/1-427 AGPMIPESFI LEVSTRDSAV LSATGATTKK LSPKLVTPVP LTKELVTEIP ENSTTRP00000003804/1-413 -GPLTPEPTT LEVARRDPAV LDAGGAATGN VSMEPVILVT LTKEPVTVIP bmy_08267T0/1-470 AGPLTPEPTT LEVATRDPAV LDAGGAATGN LSMELVILVT LTKEPVTVIP BACU018833/1-430 AGPLTPEPTT LEVATRDPAV LDAGGAATGN LSMELVLLVT LTKEPVTVIP 151 200 ENSP00000228463/1-428 --MEIQTTQ- PAATEAQTTQ PVPTEAQTTP LAATEAQTTR LTATEAQTT- ENSBTAP00000029577/1-427 PKVKDPSTEL AAATEALSTD PVTTEALSTE PRLTEALSTE PVATEVLST- ENSTTRP00000003804/1-413 PIMEVPSTE- SAAVEALSTG PA-RAALATE PAATEALSTE TLPTXXXXX- bmy_08267T0/1-470 PIMEDPSTE- SAAVEALSTG PAGRMALATE PAATEALSTE TLPTEPASTM BACU018833/1-430 PITEDPSTE- SAAVEALSTG PAGRMALATE PAATEALSTE TLPTEPAST- 201 250 ENSP00000228463/1-428 ---------- ---------- ----PLAATE AQTTPPAATE AQTTQPTGLE ENSBTAP00000029577/1-427 ---------- ---------- ----GPRLTE ALSTEPAATE ALSTEPRLTE ENSTTRP00000003804/1-413 ---------- ---------- ----XXXXXX XXXXXXXXXX XXXXXXXXXX bmy_08267T0/1-470 APATERTARE ALSTGAMSTE STAMGALSTE ALSTESTATE ALSTESTATE BACU018833/1-430 ---------- ---------- ----MALATE RTAMETLSTG AMFTESTATE 251 300 ENSP00000228463/1-428 AQTTAPAAME AQTTAPAAME AQTTPPAAME AQTTQTTAME AQTTAPEATE ENSBTAP00000029577/1-427 ALSTEP---- ---------- -RLT-----E ALSTEPAATE SLSTEPKITE ENSTTRP00000003804/1-413 XXXXXXXXXX XXXXXXXXXX XXXX-----X XXXXXXXXXX XXXXXXXXXX bmy_08267T0/1-470 ALSTEPTATE TVSPESLTTE STAT-----E ALSTESTATE ALFMEPTVTE BACU018833/1-430 ALSTEP---- ---------- -TAT-----E ALSTESTATE ALFMEPTVTE 301 350 ENSP00000228463/1-428 AQTTQPTATE AQTTPLAAME ALSTEPSATE ALSMEPTTKR GLFIPFSVSS ENSBTAP00000029577/1-427 TLPTEPATTE APFREPTTIP ALPTDPTTVE ALPTRTATTR GLTTALPVAS ENSTTRP00000003804/1-413 XXXXXXXXXX XXXXXXXXTG ALPTDPATVK TLPTRPATTR GLTTALAVPS bmy_08267T0/1-470 VLSTELATTA VLSMEPTTTG ALPTDPATVK TLPTRPATTR GLTTALPVPS BACU018833/1-430 VLSTELATTA VLSMEPTTTG ALPTDPATVK TLPTRPATTR GLTTALPVPS 351 400 ENSP00000228463/1-428 VTHKGIPMAA SNLSVN---- ---------- -----YPV-G APDHISVKQC ENSBTAP00000029577/1-427 DTPKGTTVAA GNLSDD--FT GNKDHSLFPW SSVAPLPADG LPDPGPVKQC ENSTTRP00000003804/1-413 DPPKSTIVAV GNSSDN---- ---------- -----SPQ-R ALDPSSVKQC bmy_08267T0/1-470 DPPKSTIVAV GNSSDDLIYK WKNGQSLFPX SSVAPSPTEG LLDPSSVKQC BACU018833/1-430 DPPKSTIVAV GNSSDDLIHK WKNGQSLFPR SSVAPSPTEG LLDPSSVKQC 401 450 ENSP00000228463/1-428 LLAILILALV ATIFFVCTVV LAVRLSRKGH MYPVRNYSPT EMVCISSLLP ENSBTAP00000029577/1-427 LLAILILALL ATIFLVCTVV LAIRLSRKNH LYPVRDYSPS EMVCISSLLP ENSTTRP00000003804/1-413 LLAILILALV ATIFLICTVV LAIRLSRKNH LYPVRNYSPT EMVCISSLLP bmy_08267T0/1-470 LLAILILALV ATIFLVCTVV LAIRLSRKNH LYPVRNYSPT EMVCISSLLP BACU018833/1-430 LLAILILALV ATVFLVCTVV LAIRLSRKNH LYPVRNYSPT EMVCISSLLP 451 500 ENSP00000228463/1-428 DGGEGPSATA NGGLSKAKSP GLTPEPREDR EGDDLTLHSF LP ENSBTAP00000029577/1-427 ERGEGPAPVP NGDLPKAREQ GRKAGPREGR EGDDLTLHSF LP ENSTTRP00000003804/1-413 EGGEGPAAMA NGGLPKAKSQ GLKAGSGEDR EGDDLTLHSF LP bmy_08267T0/1-470 DGGEGPAAMA NGRLPKAKSQ GLKAGPGEDR EGDDLTLHSF LP BACU018833/1-430 EGGEGPAAMA NGRLPKAKSQ GLKAGPGEDR EGDDLTLHSF LP