KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:39:29 2014 Check: 00 .. Name: ENSP00000366901/1-273 Len: 276 Check: 118 Weight: 1.00 Name: ENSTTRP00000014302/1-273 Len: 276 Check: 9471 Weight: 1.00 Name: ENSBTAP00000029608/1-251 Len: 276 Check: 390 Weight: 1.00 Name: bmy_07009T0/1-237 Len: 276 Check: 1665 Weight: 1.00 Name: BACU020284/1-276 Len: 276 Check: 3621 Weight: 1.00 // 1 50 ENSP00000366901/1-273 MLGQLLPHTA RGLGAAE-MP GQGPGSDWTE RSSSAEPPAV AGTEGGGGGS ENSTTRP00000014302/1-273 ERGKLLPHIA RGQGTREEMP GQGPVSEWTE CSSSTEPPTG ARAEGGGGGS ENSBTAP00000029608/1-251 ---------- --------MP NQGPVSDWTE CSSSAEPPAV ARAEGGGGGS bmy_07009T0/1-237 ---------- --------MP GQGPVSEWTE CSSSTEPPTV ARAEGGGGGS BACU020284/1-276 ERGKLLPHIA RGQGTREEMP GQGPVSEWTE CSSSTEPPTV ARAEGGGGGS 51 100 ENSP00000366901/1-273 AGYSCYQNSK GSDRIKDGYK VNSHIAKLQE LWKTPQNQTI HLSKSMMEAS ENSTTRP00000014302/1-273 AGYSYYQNSK GIDRFKDGHK MNSHIAMLQE LWKTPQVQTI HIPKSMTETS ENSBTAP00000029608/1-251 AGHSYYQNSK --DRIKDGHK VNSPRAKLQE LWKMP--QTV HTPKSMTEPS bmy_07009T0/1-237 AGYSYYQNSK GIDRFKDGHK MNSHITKLQE LWKMPQVQTI HIPKSMTETS BACU020284/1-276 AGYSYYQNSK GIDRLKDGHK MNSHITKLQE LWKTPQVQTI HVPKSMTETS 101 150 ENSP00000366901/1-273 FFKHPDLTTG QKRYLCSIAK IYNANYLKML MKRQYMHVLQ HSSQKP--GV ENSTTRP00000014302/1-273 FLKHPDLTLG QKRYLCSIAK IYNANYLRTL MKRQYMHVTQ HSSQKP--GV ENSBTAP00000029608/1-251 FLKHPDLTLV EKHYLCSVAK IYNANYLRTL MKRHYMHVIQ RSSQKP--GV bmy_07009T0/1-237 LLKHPDLTLG QKRYLCSIAK IYNANYLRTL MKRQ------ ---------- BACU020284/1-276 LLKHPDLTLG QKRYLCSIAK IYNANYLRTL MKRQYMHVTQ HSSQKPGRGV 151 200 ENSP00000366901/1-273 LTHHRSRLSS RYSQKQHYPC TTWRHQLERE DSGSSDIAAA SAPEMLIQHS ENSTTRP00000014302/1-273 LTHHRSHLSS RYSQQ-HYPC TTWRXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000029608/1-251 LTHHRGHLSS RYSQKQHYPC TTWRHQLERE DLGPPNTAAA SAPEM-IQHS bmy_07009T0/1-237 -----SHLSS RYSQKQHYPC TTWRHQLERK DSGPSNIAAA SAPEMIIQHS BACU020284/1-276 LTHHRSHLSS RYSQKQHYPC TTWRHQLERE DSGPSYIAAA SAPEMIIQHS 201 250 ENSP00000366901/1-273 LWRPVRNKEG IKTGYASKTR CKSLKIFRRP RKLFMQTVSS DDSESHMSEE ENSTTRP00000014302/1-273 XXXXXXXXXX LKTGYASKTR CKSLKIFRKP GRLFMQSVST NDSESYMNEE ENSBTAP00000029608/1-251 LWRPVRNKEG LKTGYASKTR CKSLKIFRKP GRPFMQSVSA NDSESYMNEE bmy_07009T0/1-237 LWRPVRNKEG LKTGYASKTR CKSLKIFRKP GRLFMQSVST NDSESYMNEE BACU020284/1-276 LWRPVRNKEG LKTGYASKTR CKSLKIFRKP GRLFMQSVST NDSESYMNEE 251 300 ENSP00000366901/1-273 KKEEDLLNNF MQSMSIEEQG EHLMLT ENSTTRP00000014302/1-273 KKEDDLLNKC MQSMSIEEHG EHLMLT ENSBTAP00000029608/1-251 KKEEDLLNKC MQSMSIEEQG EHLMLT bmy_07009T0/1-237 KKEDDLLNKC MQSMSIEEQG EHLMLT BACU020284/1-276 KKEDDLLNNC MQSMSIEEQG EHLMLT