KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:39:32 2014 Check: 00 .. Name: ENSP00000345492/1-575 Len: 677 Check: 4542 Weight: 1.00 Name: bmy_07022T0/1-425 Len: 677 Check: 8011 Weight: 1.00 Name: BACU018425/1-537 Len: 677 Check: 8356 Weight: 1.00 Name: ENSTTRP00000000894/1-558 Len: 677 Check: 6216 Weight: 1.00 Name: ENSBTAP00000029616/1-586 Len: 677 Check: 5638 Weight: 1.00 // 1 50 ENSP00000345492/1-575 MNGPALQPSS PSSAPSASP- ---AAAPRGW SEFCELHAVA AARELARQYW bmy_07022T0/1-425 MSVPVLSIA- ---------- ------PPIW AE-------- ---------- BACU018425/1-537 MNGPTLQSSS ASSASSASS- AATAPSPRGW SEFCELHAVA AARELARQYW ENSTTRP00000000894/1-558 MNGPTLQSSS ASSASSAAT- ---APSPRGW SEFCELHAV- AARELARQYW ENSBTAP00000029616/1-586 MNGPTLQSSS ASSASSASTS AAAAPSPRGW SEFCELHAVA AARELARQYW 51 100 ENSP00000345492/1-575 LFAREHPQHA PLRAELVSLQ FTDLFQRYFC REVRDGRAPG ---------- bmy_07022T0/1-425 ---------- PL-------- ---------- ---------- ---------- BACU018425/1-537 LFAREHPHHA PLRAELVSLQ FTDLFQRYFC RE---GAAEG CAAGARGFPH ENSTTRP00000000894/1-558 -FAREHP-HA PLRAELVSLQ -TDLFQRYFC REVREGRAPG ---------- ENSBTAP00000029616/1-586 LFAREHPHHA PLRAELVSLQ FTDLFQRYFC REVREGRAPG PPAPRAAPAA 101 150 ENSP00000345492/1-575 --RDYRDTGR GPPAKAEAS- ------PEPG PGPAAPGLPK ARSSEELAPP bmy_07022T0/1-425 ---------- ---------- ---------- ---------- -----AF-PP BACU018425/1-537 RAGSAEGPGG GPTAKG---- ------PGGL ASSGTPGPVR LRCSSAF-PS ENSTTRP00000000894/1-558 --RDYRETGR GTPAKAEVSP AE----PGPA APAPAPGLPK ARSSEELAPP ENSBTAP00000029616/1-586 PARDYRETGR GSPAKAEAAP AEQGAGPGPA APAPAPGLPK ARSSKELAPP 151 200 ENSP00000345492/1-575 RPPGPCSFQH FRRSLRHIFR RRSAGELPAA HTAAAPGTPG EAAETPARPG bmy_07022T0/1-425 ---------- ---------- ---------- ---------- --------PG BACU018425/1-537 RAL------- ---------- --------ST PSRAA----G KPGEQCQVRG ENSTTRP00000000894/1-558 RPA--CSLQH LRHSLRHIFR HRSAGELPAA PSAAA----G EAGEAPARPG ENSBTAP00000029616/1-586 RPAATCSLRH LRHSLRHIFR HRSAGELPAG PVATN----G EAGEAPARPG 201 250 ENSP00000345492/1-575 LAKKFLPWSL AREPPPEALK EAVLRYSLAD EASMDSGARW QRGRLALRRA bmy_07022T0/1-425 ---------- ---------- ---------- ---------- ---------- BACU018425/1-537 RAPRLSLWSC VSLGHHEDTK EPVSR----- SASRQRGART SFATVCAARV ENSTTRP00000000894/1-558 LARKLLPWSL AREPPPEALK EATLRYSLAD EASMDSGARW QRGRLALRRA ENSBTAP00000029616/1-586 LARKLLPWSL AREPPPEALK EATLRYSLAD EASMDSGARW QRGRLALRRT 251 300 ENSP00000345492/1-575 PGPDGPDRVL ELFDPPKSSR PKLQAACSSI QEVRWCTRLE MPDNLYTFVL bmy_07022T0/1-425 ---------- -----SMSSK PKLQAACSSI QEIRRCTRLE MPDNLYTFVL BACU018425/1-537 -GCGERRRML SSL--PVSSK PKLQAACSSI QEIRRCTRLE MPDNLYTFVL ENSTTRP00000000894/1-558 -GPDGADRLL ELFDPPKSSK PKLQAACSSI QEIRRCTRLE MPDNLYTFVL ENSBTAP00000029616/1-586 -GPDGADRLL ELFDPPKSSK SKLQAACSSI QEIRRCTRLE MPDNLYTFVL 301 350 ENSP00000345492/1-575 KVKDRTDIIF EVGDEQQLNS WMAELSECTG RGLESTEAEM HIPSALEP-S bmy_07022T0/1-425 KVKDRTDIIF EVGDEQQLNS WMAELRECAG QGL-STDPEM HIPSALEP-G BACU018425/1-537 KVKDRTDIIF EVGDEQQLNS WMAELRECAG QGL-STDPEM HIPSALEP-G ENSTTRP00000000894/1-558 KVKDRTDIIF EVGDEQQLNS WMAELRECAG QGL-STDPEM HIPSALEP-G ENSBTAP00000029616/1-586 KVKDRTDIIF EVGDEQQLNS WMAELRACTG QGLETTDPEP HFPSATEPVG 351 400 ENSP00000345492/1-575 TSSSPRGSTD SLNQ------ ---------- ---------- -------GAS bmy_07022T0/1-425 TSNSPRGSTD SLNQGEGSGP LSSGMSELSP GHKAHTKDHH HPSPSLSGAS BACU018425/1-537 TSNSPRGSTD SLNQ------ ---------- ---------- -------GAS ENSTTRP00000000894/1-558 TSNSPRGSTD SLNQ------ ---------- ---------- -------GAS ENSBTAP00000029616/1-586 TADSPRGSTD SLNQ------ ---------- ---------- -------GGS 401 450 ENSP00000345492/1-575 PGGLLDPACQ KTDHFLSCYP WFHGPISRVK AAQLVQLQGP DAHGVFLVRQ bmy_07022T0/1-425 PGGLLDPACQ KTDHFLSCYP WFHGPISRVK AAQLVQLQGP DAHGVFLVRQ BACU018425/1-537 PGGLLDPACQ KTDHFLSCYP WFHGPISRVK AAQLVQLQGP DAHGVFLVRQ ENSTTRP00000000894/1-558 PGGLLDPACQ KTDHFLSCYP WFHGPISRVK AAQLVQLQGP DAHGVFLVRQ ENSBTAP00000029616/1-586 PGGLLDPACQ KTDHFLSCYP WFHGPISRVK AAQLVQLQGP DAHGVFLVRQ 451 500 ENSP00000345492/1-575 SETRRGEYVL TFNFQGIAKH LRLSLTERGQ CRVQHLHFPS VVDMLHHFQR bmy_07022T0/1-425 SETRRGEYVL TFNFQGIAKH LRLSLTERGQ CRVQHLHFPS VVDMLHHFQR BACU018425/1-537 SETRRGEYVL TFNFQGIAKH LRLSLTERGQ CRVQHLHFPS VVDMLHHFQR ENSTTRP00000000894/1-558 SETRRGEYVL TFNFQGIAKH LRLSLTERGQ CRVQHLHFPS VVDMLHHFQR ENSBTAP00000029616/1-586 SETRRGEYVL TFNFQGIAKH LRLSLTERGQ CRVQHLHFPS VVDMLHHFQR 501 550 ENSP00000345492/1-575 SPIPLECGAA CDVRLSSYVV VVSQP----- ---------- ---------- bmy_07022T0/1-425 SPIPLECGAA CDVRLSSYVV VVSQPPGVTL MPLDKGGGGT GNQDLVLCPS BACU018425/1-537 SPIPLECGAA CDVRLSSYVV VVSQP----- ---------- ---------- ENSTTRP00000000894/1-558 SPIPLECGAA CDVRLSSYVV VVSQP----- ---------- ---------- ENSBTAP00000029616/1-586 SPIPLECGAA CDVRLSSYVV VVSQP----- ---------- ---------- 551 600 ENSP00000345492/1-575 ---------- ---------- PGSCNTVLFP FSLPHWDSES LPHWGSELGL bmy_07022T0/1-425 NTCLHPVKTD SVVSLLVTCP PGSSNTVLFP FSLSRWD--- -----SELGL BACU018425/1-537 ---------- ---------- PGSSNTVLFP FSLSRWD--- -----SELGL ENSTTRP00000000894/1-558 ---------- ---------- PGSCNTVLFP FSLSRWD--- -----SELGL ENSBTAP00000029616/1-586 ---------- ---------- PGSSNTVLFP FSLSRWD--- -----SELGL 601 650 ENSP00000345492/1-575 PHLSSSGCPR GLSPEGLPGR SSPPEQIFHL VPSPEELANS LQHLEHEPVN bmy_07022T0/1-425 PHLSTSGCPR GLGPEGLPGR SSPPEQIFHL VPSPEELANS LRHLEPEPTS BACU018425/1-537 PHLSASGCPR GLGPEGLPGR SSPPEQIFHL VPSPEELANS LRHLEPEPTS ENSTTRP00000000894/1-558 PHLSASGCPR GLGPEGLPGR SSPPEQIFHL VPSPEELANS LRHLEPEPTS ENSBTAP00000029616/1-586 PHLSTSGCPR GLGPEGLPGR SSPPEQIFHL VPSPEELANS LRHLEPEPAS 651 700 ENSP00000345492/1-575 RARDSDYEMD SSSRSHLRAI DNQYTPL bmy_07022T0/1-425 RARDSDYEMD SSSRSHLRAI DNQYTPL BACU018425/1-537 RARDSDYEMD SSSRSHLRAI DNQYTPL ENSTTRP00000000894/1-558 RARDSDYEMD SSSRSHLRAI DNQYTPL ENSBTAP00000029616/1-586 RARDSDYEMD SSSRSRLRAI DNQYTPL