KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:39:48 2014 Check: 00 ..
Name: bmy_07153T0/1-384 Len: 496 Check: 1314 Weight: 1.00
Name: ENSP00000395083/1-373 Len: 496 Check: 4136 Weight: 1.00
Name: ENSBTAP00000029823/1-373 Len: 496 Check: 4821 Weight: 1.00
Name: BACU013577/1-481 Len: 496 Check: 8184 Weight: 1.00
Name: ENSTTRP00000015208/1-373 Len: 496 Check: 4169 Weight: 1.00
//
1 50
bmy_07153T0/1-384 ---------- ---------- ---------- ---------- ----------
ENSP00000395083/1-373 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000029823/1-373 ---------- ---------- ---------- ---------- ----------
BACU013577/1-481 MHIFWQLMPF AAAGVVHILK LLIPRCPSLI LQPPTARSRK FLVAAVSRAL
ENSTTRP00000015208/1-373 ---------- ---------- ---------- ---------- ----------
51 100
bmy_07153T0/1-384 ---------- ---------- ---------- ---------- ----MYKICH
ENSP00000395083/1-373 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000029823/1-373 ---------- ---------- ---------- ---------- ----------
BACU013577/1-481 LLAKGSNNDI TGGCCFNLEL LEVKGQIKTS STVRVAQVDM ETEETTVQVV
ENSTTRP00000015208/1-373 ---------- ---------- ---------- ---------- ----------
101 150
bmy_07153T0/1-384 GKEKEESTMA QESPKNSAAE IPVTSNGEVD DSHEHGFNRD LKRSLPAGLG
ENSP00000395083/1-373 --------MA QESPKNSAAE IPVTSNGEVD DSREHSFNRD LKHSLPSGLG
ENSBTAP00000029823/1-373 --------MA QESPKNSAAE IPVTSNGEVD DSHEHGFNRD LKRSLPAGLG
BACU013577/1-481 NIKKAESTMA QESPKNSAAE IPVTSNGEVD DSHEHGFNRD LKRSLPAGLG
ENSTTRP00000015208/1-373 --------MA QESPKNSAAE IPVTSNGEVD DSHEHGFNRD LKRSLPAGLG
151 200
bmy_07153T0/1-384 LSETQITSHG FESTKEGVIE AGAFQGSPAP PLPSVMSPGR VAASRLAQQG
ENSP00000395083/1-373 LSETQITSHG FDNTKEGVIE AGAFQGSPAP PLPSVMSPSR VAASRLAQQG
ENSBTAP00000029823/1-373 LSETQITSHG FDSTKEGVIE AGSFQGSPAP PLPSVMSPSR VAASRLTQQG
BACU013577/1-481 LSETQITSHG FESTKEGVIE AGAFQGSPAP PLPSVMSPGR VAASRLAQQG
ENSTTRP00000015208/1-373 LSETQITSHG FESTKEGVIE AGAFQGSPAP PLPSVMSPSR VAASRLAQQG
201 250
bmy_07153T0/1-384 SDLIVPAGGQ RTQTKSGPVI LADETKNPAM EKLELVRKWS LNTYKNVPPV
ENSP00000395083/1-373 SDLIVPAGGQ RTQTKSGPVI LADEIKNPAM EKLELVRKWS LNTYK-----
ENSBTAP00000029823/1-373 SDLIVPAGSQ RTQTKSGPVI LADETKNPAM EKLELVRKWS LNTYK-----
BACU013577/1-481 SDLIVPAGGQ RTQTKSGPVI LADETKNPAM EKLELVRKWS LNTYK-----
ENSTTRP00000015208/1-373 SDLIVPAGSQ RTQTKSGPVI LADETKNPAM EKLELVRKWS LNTYK-----
251 300
bmy_07153T0/1-384 FTPLSMIYSI CTRQIISEKL GRGSRTVDLE LEAQIDILRD NKKKYENILK
ENSP00000395083/1-373 ---------- CTRQIISEKL GRGSRTVDLE LEAQIDILRD NKKKYENILK
ENSBTAP00000029823/1-373 ---------- CTRQIISEKL GRGSRTVDLE LEAQIDILRD NKKKYENILK
BACU013577/1-481 ---------- CTRQIISEKL GRGSRTVDLE LEAQIDILRD NKKKYENILK
ENSTTRP00000015208/1-373 ---------- CTRQIISEKL GRGSRTVDLE LEAQIDILRD NKKKYENILK
301 350
bmy_07153T0/1-384 LAQTLSTQLF QMVHTQRQLG DAFADLSLKS LELHEEFGYN ADTQKLLAKN
ENSP00000395083/1-373 LAQTLSTQLF QMVHTQRQLG DAFADLSLKS LELHEEFGYN ADTQKLLAKN
ENSBTAP00000029823/1-373 LAQTLSTQLF QMVHTQRQLG DAFADLSLKS LELHEEFGYN ADTQKLLAKN
BACU013577/1-481 LAQTLSTQLF QMVHTQRQLG DAFADLSLKS LELHEEFGYN ADTQKLLAKN
ENSTTRP00000015208/1-373 LAQTLSTQLF QMVHTQRQLG DAFADLSLKS LELHEEFGYN ADTQKLLAKN
351 400
bmy_07153T0/1-384 GETLLGAINF FIASVNTLVN KTIEDTLMTV KQ-----IEY DAYRTDLEEL
ENSP00000395083/1-373 GETLLGAINF FIASVNTLVN KTIEDTLMTV KQYESARIEY DAYRTDLEEL
ENSBTAP00000029823/1-373 GETLLGAINF FIASVNTLVN KTIEDTLMTV KQYESARIEY DAYRTDLEEL
BACU013577/1-481 GETLLGAINF FIASVNTLVN KTIEDTLMTV KQYESARIEY DAYRTDLEEL
ENSTTRP00000015208/1-373 GETLLGAINF FIASVNTLVN KTIEDTLMTV KQYESARIEY DAYRTDLEEL
401 450
bmy_07153T0/1-384 NLGPRDANTL PKIEQSQHLF QAHKXKYDKM RNDVSIKLKF LEENKNFISL
ENSP00000395083/1-373 NLGPRDANTL PKIEQSQHLF QAHKEKYDKM RNDVSVKLKF LEENKVKVLH
ENSBTAP00000029823/1-373 NLGPRDANTL PKIEQSQHLF QAHKEKYDKM RNDVSVKLKF LEENKVKVLH
BACU013577/1-481 NLGPRDANTL PKIEQSLHLF QAHKEKYDKM RNDVSIKLKF LEENKVKVLH
ENSTTRP00000015208/1-373 NLGPRDANTL PKIEQSQHLF QAHKEKYDKM RNDVSIKLKF LEENKVKVLH
451 500
bmy_07153T0/1-384 DLRANTKNTV YAYSYRNK-- -DDKSARYSV VLNEIC---- ------
ENSP00000395083/1-373 NQLVLFHNAI AAYFAGNQKQ LEQTLKQFHI KLKTPGVDAP SWLEEQ
ENSBTAP00000029823/1-373 NQLVLFHNAI AAYFAGNQKQ LEQTLKQFHI KLKTPGVDAP SWLEEQ
BACU013577/1-481 NQLVLFHNAI AAYFAGNQKQ LEQTLKQFHI KLKNPGVDAP SWLEEQ
ENSTTRP00000015208/1-373 NQLVLFHNAI AAYFAGNQKQ LEQTLKQFHI KLKNPGVDTT SWLEEQ