KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:39:53 2014 Check: 00 .. Name: bmy_21650T0/1-278 Len: 405 Check: 9830 Weight: 1.00 Name: BACU009293/1-328 Len: 405 Check: 3468 Weight: 1.00 Name: ENSP00000295633/1-308 Len: 405 Check: 4533 Weight: 1.00 Name: ENSBTAP00000029886/1-307 Len: 405 Check: 3406 Weight: 1.00 Name: ENSTTRP00000015791/1-306 Len: 405 Check: 2142 Weight: 1.00 // 1 50 bmy_21650T0/1-278 ---------- ---------- ---------- ---------- ---------- BACU009293/1-328 MRIPGAPSQG STLTDTPAAF QALKAKDLGS SLDFLLPLFC LEELRSKSKI ENSP00000295633/1-308 ---------- ---------- MWKRWLALAL ALVAVAWVRA EEELRSKSKI ENSBTAP00000029886/1-307 ---------- ---------M MWRRW--LAL ALVAVAWVHA EEQVRSKSKI ENSTTRP00000015791/1-306 ---------- ---------- MWTRW--LAL ALVAVAWVHA EEEPRSKSKI 51 100 bmy_21650T0/1-278 ---------- -------MDP T--------- --------DG ----NIPELF BACU009293/1-328 CANVFCGAGR ECAVTEKGEP TCLCIEQCKP HKRPVCGSNS KTYLNHCELH ENSP00000295633/1-308 CANVFCGAGR ECAVTEKGEP TCLCIEQCKP HKRPVCGSNG KTYLNHCELH ENSBTAP00000029886/1-307 CANVFCGAGR ECAVTEKGEP TCLCIEQCKP HKRPVCGSNG KTYLNHCELH ENSTTRP00000015791/1-306 CANVFCGAGR ECAVTEKGEP TCLCIEQCKP HKRPVCGSNS KTYLNHCELH 101 150 bmy_21650T0/1-278 RRAAVS---- NLDFD----- ---------- ---------- ------QSLE BACU009293/1-328 RDACLTGSKI QVDYDGHCKE KKSVSPSASP VVCYQSNRDE LRHRIIQWLE ENSP00000295633/1-308 RDACLTGSKI QVDYDGHCKE KKSVSPSASP VVCYQSNRDE LRRRIIQWLE ENSBTAP00000029886/1-307 RDACLTGSKI QVDYDGHCKE KKSVSPSASP VVCYQSNRDE LRRRIIQWLE ENSTTRP00000015791/1-306 RDACLTGSKI QVDYDGHCKE KKSVSPSASP VVCYQSNRDE LRRRIIQWLE 151 200 bmy_21650T0/1-278 IATL---LLQ LAPGHPE-LS QMAKNFDNGD SRLDSSEFLK FVEQNETAIN BACU009293/1-328 AEIIPDGWFS KGSNYSEILD KYFKNFDNGD SRLDSSEFLK FVEQNETAIN ENSP00000295633/1-308 AEIIPDGWFS KGSNYSEILD KYFKNFDNGD SRLDSSEFLK FVEQNETAIN ENSBTAP00000029886/1-307 AEIIPDGWFS KGSNYSEILD KYFKNFDNGD SRLDSSEFLK FVEQNETAIN ENSTTRP00000015791/1-306 AEIIPDGWFS KGSNYSEILD KYFKNFDNGD SRLDSSEFLK FVEQNETAIN 201 250 bmy_21650T0/1-278 ITTYADQGSN KLLRGLCVDA LIELSDENAD WKLSFQEFLK CLNPAFNPPE BACU009293/1-328 ITTYADQGNN KLLRGLCVDA LIELSDENAD WKLSFQEFLK CLNPAFNPPE ENSP00000295633/1-308 ITTYPDQENN KLLRGLCVDA LIELSDENAD WKLSFQEFLK CLNPSFNPPE ENSBTAP00000029886/1-307 ITTYADQENN KLLRGLCVDA LIELSDENAD WKLSFQEFLK CLNPSFNPPE ENSTTRP00000015791/1-306 ITTYADQGNN KLLRGLCIDA LIELSDENAD WKLSFQEFLK CLNPAFNPPE 251 300 bmy_21650T0/1-278 KSMPNLRNRE GVTGPQPSIS ELRFRSKNHR VDGGVCSDMV PLRDKQVSSG BACU009293/1-328 K--------- ---------- ---------- ---------- ---------- ENSP00000295633/1-308 K--------- ---------- ---------- ---------- ---------- ENSBTAP00000029886/1-307 K--------- ---------- ---------- ---------- ---------- ENSTTRP00000015791/1-306 K--------- ---------- ---------- ---------- ---------- 301 350 bmy_21650T0/1-278 KGVTCTDYSQ DVLFHPRPKL LPVISGPTEC ALEDETYADG AETEVDCNRC BACU009293/1-328 ---------- ---------- --------KC ALEDETYADG AETEVDCNRC ENSP00000295633/1-308 ---------- ---------- --------KC ALEDETYADG AETEVDCNRC ENSBTAP00000029886/1-307 ---------- ---------- --------KC ALEDETYADG AETEVDCNRC ENSTTRP00000015791/1-306 ---------- ---------- --------KC ALEDETYADG AETEVDCNRC 351 400 bmy_21650T0/1-278 VCACGNWVCT AMTCDGKNQK GAQTHTEEEM TRYVEELQKH QETAEKTKRV BACU009293/1-328 VCACGNWVCT AMTCDGKNQK GAQTHTEEEM TRYVEELQKH QETAEKTKRV ENSP00000295633/1-308 VCACGNWVCT AMTCDGKNQK GAQTQTEEEM TRYVQELQKH QETAEKTKRV ENSBTAP00000029886/1-307 VCACGNWVCT AMTCDGKNQK GAQTQAEEEM TRYVQELQKH QETAEKSKRV ENSTTRP00000015791/1-306 VCACGNWVCT AMTCDGKNQK GAQTHTEEEM TRYVEEVQKH QETAEKTKRV 401 450 bmy_21650T0/1-278 STKEI BACU009293/1-328 STKEI ENSP00000295633/1-308 STKEI ENSBTAP00000029886/1-307 STKEI ENSTTRP00000015791/1-306 STKEI