KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:39:54 2014 Check: 00 .. Name: ENSP00000370034/1-1049 Len: 1050 Check: 5306 Weight: 1.00 Name: ENSBTAP00000029890/1-1050 Len: 1050 Check: 9905 Weight: 1.00 Name: ENSTTRP00000003025/1-1050 Len: 1050 Check: 8723 Weight: 1.00 Name: bmy_00897T0/1-1046 Len: 1050 Check: 4104 Weight: 1.00 Name: BACU008495/1-1046 Len: 1050 Check: 3434 Weight: 1.00 // 1 50 ENSP00000370034/1-1049 MVFPMWTLKR QILILFNIIL ISKLLGARWF PKTLPCDVTL DVPKNHVIVD ENSBTAP00000029890/1-1050 MVFPMWTLKR QFPILFNMIL ISGLLGARWF PKTLPCDVTL DAPNTHVIVD ENSTTRP00000003025/1-1050 MVFLMWTSKR QFLILFNMIL ISELLGARWF PKTLPCDVTL DAPNAHVIVD bmy_00897T0/1-1046 ----MWTSKR QFLILFNMIL ISELLGARWF PKTLPCDVTL DAPNAHVIVD BACU008495/1-1046 ----MWTSQR QFLILFNMIL ISELLGARWF PKTLPCDVTL DAPNAHVIVD 51 100 ENSP00000370034/1-1049 CTDKHLTEIP GGIPTNTTNL TLTINHIPDI SPASFHRLDH LVEIDFRCNC ENSBTAP00000029890/1-1050 CTDKHLTEIP GGIPANATNL TLTINHIAGI SPASFHRLDH LVEIDFRCNC ENSTTRP00000003025/1-1050 CTDKHLTEIP GDIPTNATNL TLTINHIAGI SPASFYRLDH LVEIDFRCNC bmy_00897T0/1-1046 CTDKHLTEIP GGIPTNATNL TLTINHIAGI SPASFYRLDH LVEIDFRCNC BACU008495/1-1046 CTDKHLTEIP GGIPTNATNL TLTINHIAGI SPASFYRLDH LVEIDFRCNC 101 150 ENSP00000370034/1-1049 VPIPLGSKNN MCIKRLQIKP RSFSGLTYLK SLYLDGNQLL EIPQGLPPSL ENSBTAP00000029890/1-1050 VPVRLGPKDN VCTKRLQIKP NSFSKLTYLK SLYLDGNQLL EIPQDLPPSL ENSTTRP00000003025/1-1050 VPVRPGPKDN VCTRRLQIEP SSFSKLTYLK SLYLDGNQLL EIPQDLPPSL bmy_00897T0/1-1046 VPVRPGPKDN VCTRRLQIKP SSFSKLTYLK SLYLDGNQLL EIPQDLPPSL BACU008495/1-1046 VPVRPGPKDN VCTRRLQIKP SSFSKLAYLK SLYLDGNQLL EIPQDLPPSL 151 200 ENSP00000370034/1-1049 QLLSLEANNI FSIRKENLTE LANIEILYLG QNCYYRNPCY VSYSIEKDAF ENSBTAP00000029890/1-1050 QLLSLEANNI FLIMKENLTE LANLEILYLG QNCYYRNPCN VSFTIEKDAF ENSTTRP00000003025/1-1050 QLLSLEANNI FSIMKENLTE LANLEILYLG QNCYYRNPCN VSFSIEKDAF bmy_00897T0/1-1046 QLLSLEANSI FSIMKENLTE LANLEILYLG QNCYYRNPCN VSFSIEKDAF BACU008495/1-1046 QLLSLEANSI FSIMKENLTE LANLEILYLG QNCYYRNPCN VSFSIEKDAF 201 250 ENSP00000370034/1-1049 LNLTKLKVLS LKDNNVTAVP TVLPSTLTEL YLYNNMIAKI QEDDFNNLNQ ENSBTAP00000029890/1-1050 LNMRNLKLLS LKDNNISAVP TVLPSSLTEL YLYNNIITKI QEDDFNNLSQ ENSTTRP00000003025/1-1050 LNMTNLKLLS LKDNNISAVP TILPPTLTEL YLYNNIIAKI QEDDFNNLNR bmy_00897T0/1-1046 LNMTNLKLLS LKDNNISAVP TILPPTLTEL YLYNNIIAKI QEDDFNNLNR BACU008495/1-1046 LNMTNLKLLS LKDNNISAVP TILPPTLTEL YLYNNIIAKI QEDDFNNLNR 251 300 ENSP00000370034/1-1049 LQILDLSGNC PRCYNAPFPC APCKNNSPLQ IPVNAFDALT ELKVLRLHSN ENSBTAP00000029890/1-1050 LQVLDLSGNC PRCYNVPFPC TPCENNSPLQ IDPNAFDALT ELQVLRLHSN ENSTTRP00000003025/1-1050 LQVLDLSGNC PRCYNAPFPC TPCENNSPLH IDLNAFDALT ELQILRLHSN bmy_00897T0/1-1046 LQVLDLSGNC PRCYNAPFPC TPCENNSPLQ IDLNAFDALT ELQVLRLHSN BACU008495/1-1046 LQVLDLSGNC PRCYNAPFPC TPCENNSPLQ IDLNAFDALT ELQVLRLHSN 301 350 ENSP00000370034/1-1049 SLQHVPPRWF KNINKLQELD LSQNFLAKEI GDAKFLHFLP SLIQLDLSFN ENSBTAP00000029890/1-1050 SLQHVPQRWF KNINKLKELD LSQNFLAKEI GDAKFLHLLH NLVNLDLSFN ENSTTRP00000003025/1-1050 SLQHVPQRWF KNVNKLKELD LSQNFLAKEI GDAKFLHLLH NLVQLDLSFN bmy_00897T0/1-1046 SLQYVPQRWF KNVNKLKELD LSQNFLAKEI GDAKFLHLLH NLVQLDLSFN BACU008495/1-1046 SLQYVPQRWF KNVNKLKELD LSQNFLAKEI GDAKFLHLLH NLVQLDLSFN 351 400 ENSP00000370034/1-1049 FELQVYRASM NLSQAFSSLK SLKILRIRGY VFKELKSFNL SPLHNLQNLE ENSBTAP00000029890/1-1050 YDLQVYHAVI NLSDAFSSLK KLKVLRIKGY VFKELNSLNL FPLHNLPNLE ENSTTRP00000003025/1-1050 YELQVYRAFM NLSDAFSSLK NLKVLRIKGY VFKELRSSYL SPLHNLSNLE bmy_00897T0/1-1046 YELQVYHAFM NLSDAFSSLK NLKVLRIKGY VFKELRSSYL SPLHNLSNLE BACU008495/1-1046 YELQVYHAFM NLSDAFSSLK NLKVLRIKGY VFKELRSSYL SPLHNLSNLE 401 450 ENSP00000370034/1-1049 VLDLGTNFIK IANLSMFKQF KRLKVIDLSV NKISPSGDSS EVGFCSNART ENSBTAP00000029890/1-1050 VLDLGTNFIK IANLSIFNQF KTLKFIDLSV NKISPSGDSP EGGFCSNRRT ENSTTRP00000003025/1-1050 VLDLGTNFIK IADLSIFNQF KTLKFIDLSV NKISPSGDSS EDGFCSNMRT bmy_00897T0/1-1046 VLDLGTNFIK IADLSMFKQF KTLKFIDLSV NKISPSGDSS EDGFCSNMRT BACU008495/1-1046 VLDLGTNFIK IADLSMFKQF KTLKFIDLSV NKISPSGDSS EDGFCSNMRT 451 500 ENSP00000370034/1-1049 SVESYEPQVL EQLHYFRYDK YARSCRFKNK E-ASFMSVNE SCYKYGQTLD ENSBTAP00000029890/1-1050 SVEGHGPQVL ETLHYFRYDE YARSCRSKSK EPPSFLPLNE DCYMYGQTLD ENSTTRP00000003025/1-1050 SVESHGPHVL EALHYFKYDE FARSCRSKSK EPPSLLSLNE DCYKYGPTLD bmy_00897T0/1-1046 SVEGHGPQVL EALHYFRYDE FARSCRSKTK EPPSLLPLNE DCYKYGSTLD BACU008495/1-1046 SVEGHGPQVL EALHYFRYDE FARSCRSKNK EPPSLLPLNE DCYKYGPTLD 501 550 ENSP00000370034/1-1049 LSKNSIFFVK SSDFQHLSFL KCLNLSGNLI SQTLNGSEFQ PLAELRYLDF ENSBTAP00000029890/1-1050 LSRNNIFFIK PSDFQHLSFL KCLNLSGNSI SQTLNGSEFQ PLVELKYLDF ENSTTRP00000003025/1-1050 LSGNNIFFIK SSEFQHLSFL KCLNLSGNSI SQTLNGSEFQ PLVELKYLDF bmy_00897T0/1-1046 LSGNNIFFIK SSEFQYLSFL KCLNLSGNTI SQTLNGSEFQ PLVELKYLDF BACU008495/1-1046 LSGNNIFFIK SSEFQYLSFL KCLNLSGNTI SQTLNGSEFQ PLVELKYLDF 551 600 ENSP00000370034/1-1049 SNNRLDLLHS TAFEELHKLE VLDISSNSHY FQSEGITHML NFTKNLKVLQ ENSBTAP00000029890/1-1050 SNNRLDLLYS TAFEELHNLE VLDISSNSHY FQSEGITHML NFTKNLKVLR ENSTTRP00000003025/1-1050 SNNRLDLLYS TAFEELRNLE VLDISSNSHY FQSEGITHML NFTKNLKVLK bmy_00897T0/1-1046 SNNRLDLLYS TAFEELRNLE VLDISSNSHY FQSEGITHML NFTKNLKVLK BACU008495/1-1046 SNNRLDLLYS TAFEELHNLE VLDISSNSHY FQSEGITHML NFTKNLKVLK 601 650 ENSP00000370034/1-1049 KLMMNDNDIS SSTSRTMESE SLRTLEFRGN HLDVLWREGD NRYLQLFKNL ENSBTAP00000029890/1-1050 KLMMNYNDIA TSTSRTMESE SLQILEFRGN HLDILWRDGD NRYLKFFKNL ENSTTRP00000003025/1-1050 KLMMNNNDIA TSTSRTMESE SLKILEFRGN HLDILWRDGD NRYLKLFKNL bmy_00897T0/1-1046 KLMMNNNDIA TSTSRTMESE SLKILEFRGN HLDILWRDGD NRYLKFFKNL BACU008495/1-1046 KLMMNNNDIA TSTSRTMESE SLKILEFRGN HLDILWRDGD NRYLKFFKNL 651 700 ENSP00000370034/1-1049 LKLEELDISK NSLSFLPSGV FDGMPPNLKN LSLAKNGLKS FSWKKLQCLK ENSBTAP00000029890/1-1050 LNLEELDISE NSLSFLPLGV FDSMPPNLKT LSLAKNGLKS FSWERLQSLK ENSTTRP00000003025/1-1050 LSLEELDISE NSLRFLPSGV FDGMPPNLKT LSLAKNGLTS FNWGRLQYLS bmy_00897T0/1-1046 LNLEELDISE NSLSFLPSGV FDGMPPNLKT LSLAKNGLKS FNWGRLQYLR BACU008495/1-1046 LNLEELDISE NSLSFLPSGV FDGMPPNLKT LSLAKNGLKS FSWGRLQYLR 701 750 ENSP00000370034/1-1049 NLETLDLSHN QLTTVPERLS NCSRSLKNLI LKNNQIRSLT KYFLQDAFQL ENSBTAP00000029890/1-1050 NLETLDLSFN QLKTVPERLS NCSRSLKKLI LKNNQIRCLT KYFLQGAFQL ENSTTRP00000003025/1-1050 NLETLDLSYN QLKTVPERLS NCSHSLKKLI LKNNQIRHLT KYFLQDAFQL bmy_00897T0/1-1046 NLETLDLSYN QLKTVPERLS NCSHSLKKFI LKNNQIRHLT KYFLQDAFQL BACU008495/1-1046 NLETLDLSYN QLKTVPERLS NCSHSLKKFI LKNNQIRHLT KYFLQDAFQL 751 800 ENSP00000370034/1-1049 RYLDLSSNKI QMIQKTSFPE NVLNNLKMLL LHHNRFLCTC DAVWFVWWVN ENSBTAP00000029890/1-1050 RHLDLSSNKI QVIQKTSFPE NVLNNLNILF LHHNRFLCNC DAVWFVWWVN ENSTTRP00000003025/1-1050 RHLDLSSNKI QVIQKTSFPE NVLNNLNILF LHHNRFLCNC DAVWFVWWVN bmy_00897T0/1-1046 RHLDLSSNKI QVIQKTSFPE NVLNNLNILF LHHNRFLCNC DAVWFVWWVN BACU008495/1-1046 RHLDLSSNKI QVIQKTSFPE NVLNNLDILF LHHNRFLCNC DAVWFVWWVN 801 850 ENSP00000370034/1-1049 HTEVTIPYLA TDVTCVGPGA HKGQSVISLD LYTCELDLTN LILFSLSISV ENSBTAP00000029890/1-1050 HTEVTIPYLA TDVTCMGPGA HKGQSVVSLD LYTCELDLTN FILFSLSISA ENSTTRP00000003025/1-1050 HTEVTIPYLA TDVTCMGPGA HKGQSVVSLD LYTCELDLTN FVLFSLSISA bmy_00897T0/1-1046 HTEVTIPYLA TDVTCMGPGA HKGQSVVSLD LYTCELDLTN FILFSLSISA BACU008495/1-1046 HTEVTIPYLA TDVTCMGPGA HKGQSVVSLD LYTCELDLTN FVLFSLSISA 851 900 ENSP00000370034/1-1049 SLFLMVMMTA SHLYFWDVWY IYHFCKAKIK GYQRLISPDC CYDAFIVYDT ENSBTAP00000029890/1-1050 VLSLMMITIA NHLYFWDVWY SYHFCKAKIK GYRRLISPNS CYDAFIVYDT ENSTTRP00000003025/1-1050 ALFLMMITTA NHLYFWDVWY SYHFCKAKIK GYRRLISPNS CYDAFIVYDT bmy_00897T0/1-1046 VLFLMMITTA NHLYFWDVWY SYHFCKAKIK GYRRLISPNS CYDAFIVYDT BACU008495/1-1046 VLFLMMITTA NHLYFWDVWY SYHFCKAKIK GYRRLISPNS CYDAFIVYDT 901 950 ENSP00000370034/1-1049 KDPAVTEWVL AELVAKLEDP REKHFNLCLE ERDWLPGQPV LENLSQSIQL ENSBTAP00000029890/1-1050 KDPAVTEWVL DELVAKLEDP REKCFNLCLE ERDWLPGQPV LENLSQSIQL ENSTTRP00000003025/1-1050 KDPAVTEWVL DELVAKLEDP REKCFNLCLE ERDWLPGQPV LENLSQSIQL bmy_00897T0/1-1046 KDPAVTEWVL DELVAKLEDP KEKCFNLCLE ERDWLPGQPV LENLSQSIQL BACU008495/1-1046 KDPAVTEWVL DELVAKLEDP KEKCFNLCLE ERDWLPGQPV LENLSQSIQL 951 1000 ENSP00000370034/1-1049 SKKTVFVMTD KYAKTENFKI AFYLSHQRLM DEKVDVIILI FLEKPFQKSK ENSBTAP00000029890/1-1050 SKKTVFVMTD KYAKTENFKI AFYLSHQRLM DEKVDVIILI FLEKPLQKSK ENSTTRP00000003025/1-1050 SKKTVFVMTD KYAKTENFKI AFYLSHQRLM DEKVDVIILI FLEKPLQKSK bmy_00897T0/1-1046 SKKTVFVMTD KYAKTENFKI AFYLSHQRLM DEKVDVIILI FLEKPLQKSK BACU008495/1-1046 SKKTVFVMTD KYAKTENFKI AFYLSHQRLM DEKVDVIILI FLEKPLQKSK 1001 1050 ENSP00000370034/1-1049 FLQLRKRLCG SSVLEWPTNP QAHPYFWQCL KNALATDNHV AYSQVFKETV ENSBTAP00000029890/1-1050 FLQLRKRLCG SSVLEWPTNP QAHPYFWQCL KNALATDNHV TYSQVFKETA ENSTTRP00000003025/1-1050 FLQLRKRLCG SSVLEWPTNP QAHPYFWQCL KNALATDNHV TYSQVFKETA bmy_00897T0/1-1046 FLQLRKRLCG SSVLEWPTNP QAHPYFWQCL KNALATDNHV TYSQVFKETA BACU008495/1-1046 FLQLRKRLCG SSVLEWPTNP QAHPYFWQCL KNALATDNHV TYSQVFKETA