KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:39:57 2014 Check: 00 .. Name: ENSP00000262752/1-745 Len: 748 Check: 9800 Weight: 1.00 Name: BACU015447/1-429 Len: 748 Check: 4427 Weight: 1.00 Name: ENSBTAP00000029946/1-701 Len: 748 Check: 587 Weight: 1.00 Name: bmy_08421T0/1-503 Len: 748 Check: 545 Weight: 1.00 Name: ENSTTRP00000015949/1-744 Len: 748 Check: 7628 Weight: 1.00 // 1 50 ENSP00000262752/1-745 MLPFAPQDEP WDREMEVFSG GGASSGEVNG LKMVDEPMEE GEADSCHDEG BACU015447/1-429 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000029946/1-701 ---------- ---------- ---------- ---------- -------DEG bmy_08421T0/1-503 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015949/1-744 MLPFAPQDEL WDREMELF-G GSASSCEVNG LKMVDEPMEE GEADSCQDEG 51 100 ENSP00000262752/1-745 VVKEIPITHH VKEGYEKADP AQFELLKVLG QGSFGKVFLV RKKTGPDAGQ BACU015447/1-429 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000029946/1-701 VVKEIPITHH VKEGYEKADP AQFELLKVLG QGSFGKVFLV RKKTGPDAGQ bmy_08421T0/1-503 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015949/1-744 VVKEIPITHH VKEGYEKADP AQFELLKVLG QGSFGKVFLV RKKTGPDAGQ 101 150 ENSP00000262752/1-745 LYAMKVLKKA SLKVRDRVRT KMERDILVEV NHPFIVKLHY AFQTEGKLYL BACU015447/1-429 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000029946/1-701 LYAMKVLKKA SLKVRDRIRT KMERDILVEV NHPFIVKLHY AFQTEGKLYL bmy_08421T0/1-503 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015949/1-744 LYAMKVLKKA SLKXXXXXXX XXXXXXXXXX XXXXXXXXXX XFQTEGKLYL 151 200 ENSP00000262752/1-745 ILDFLRGGDV FTRLSKEVLF TEEDVKFYLA ELALALDHLH QLGIVYRDLK BACU015447/1-429 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000029946/1-701 ILDFLRGGDV FTRLSKEVLF TEEDVKFYLA ELALALDHLH QLGIVYRDLK bmy_08421T0/1-503 ---------- -------VLF TEEDVKFYLA ELALALDHLH RLGIVYRDLK ENSTTRP00000015949/1-744 ILDFLRGGDV FTRLSKEVLF TEEDVKFYLA ELALALDHLH RLGIVYRDLK 201 250 ENSP00000262752/1-745 PENILLDEIG HIKLTDFGLS KESVDQEKKA YSFCGTVEYM APEVVNRRGH BACU015447/1-429 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000029946/1-701 PENILLDEIG HIKLTDFGLS KESVDQEKKA YSFCGTVEYM APEVVNRRGH bmy_08421T0/1-503 PENILLDEIG HIKLTDFGLS KESVDQEKKA YSFCGTVEYM APEVVNRRGH ENSTTRP00000015949/1-744 PENILLDEIG HIKLTDFGLS KESVDQEKKA YSFCGTVEYM APEVVNRRGH 251 300 ENSP00000262752/1-745 SQSADWWSYG VLMFEMLTGT LPFQGKDRNE TMNMILKAKL GMPQFLSAEA BACU015447/1-429 ---------- -----MLTGT LPFQGKDRNE TMNMILKAKL GMPQFLSAEA ENSBTAP00000029946/1-701 SQSADWWSYG VLMFEMLTGT LPFQGKDRNE TMNMILKAKL GMPQFLSAEA bmy_08421T0/1-503 SQSADWWSYG VLMFEMLTGT LPFQGKDRNE TMNMILKAKL GMPQFLSAEA ENSTTRP00000015949/1-744 SQSADWWSYG VLMFEMLTGT LPFQGKDRNE TMNMILKAKL GMPQFLSAEA 301 350 ENSP00000262752/1-745 QSLLRMLFKR NPANRLGSEG VEEIKRHLFF ANIDWDKLYK REVQPPFKPA BACU015447/1-429 QSLLRMLFKR NPANRLGSEG VDEIKRHLFF ANIDWNKLYK REVQPPFKPA ENSBTAP00000029946/1-701 QSLLRMLFKR NPANRLGSEG VDEIKRHLFF ANIDWNKLYK REVQPPFKPA bmy_08421T0/1-503 QSLLRMLFKR NPANRLGSEG VDEIKRHLFF ANIDWNKLYK REVQPPFKPA ENSTTRP00000015949/1-744 QSLLRMLFKR NPANRLXSEG VDEIKRHLFF ANIDWNKLYK REVQPPFKPA 351 400 ENSP00000262752/1-745 SGKPDDTFCF DPEFTAKTPK DSPGLPASAN AHQLFKGFSF VATSIAEEYK BACU015447/1-429 SGKPDDTFCF DPEFTAKTPK DSPGLPASAN AHQLFKGFSF VSISIAEEYK ENSBTAP00000029946/1-701 SGKPDDAFCF DPEFTAKTPK DSPGLPASAN AHQLFKGFSF VATSIAEEYK bmy_08421T0/1-503 SGKPDDTFCF DPEFTAKTPK DSPGLPASAN AHQLFKGFSF VATSIAEEYK ENSTTRP00000015949/1-744 SGKPDDTFCF DPEFTAKTPK DSPGLPASAN AHQLFKGFSF VATSIAEEYK 401 450 ENSP00000262752/1-745 ITPITSANVL PIV---QING NAAQFGEVYE LKEDIGVGSY SVCKRCIHAT BACU015447/1-429 ITPITSANVF PIV---QISG NAAQFGEVYE LKEDIGVGSY SVCKRCIHTA ENSBTAP00000029946/1-701 ITPITSANVL PIVQQKQVNG NAAQFGEVYE LKEDIGVGSY SVCKRCIHTT bmy_08421T0/1-503 ITPITSANVL PIV---QING NAAQFGEVYE LKEDIGVGSY SVCKRCIHTA ENSTTRP00000015949/1-744 ITPITSANVL PIV---QING NAAQFGAAYE LKEDIGVGSY SVCKRCIHTA 451 500 ENSP00000262752/1-745 TNMEFAVKII DKSKRDPSEE IEILMRYGQH PNIITLKDVF DDGRYVYLVT BACU015447/1-429 TNMEFAVKII DKSKRDPSEE IEILMRYGQH PNIITLKDVY DDGRYVYLVT ENSBTAP00000029946/1-701 TNMEFAVKII DKIKRDPSEE IEILMRYGQH PNIITLKDVY DDGRYVYLVT bmy_08421T0/1-503 TNMEFAVKII DKSKRDPSEE IEILMRYGQH PNIITLKDVY DDGRYVYLVT ENSTTRP00000015949/1-744 TNMEFAVKII DKSKRDPSEE IEILMRYGQH PNIITLKDVY DDGRYVYLVT 501 550 ENSP00000262752/1-745 DLMKGGELLD RILKQKCFSE REASDILYVI SKTVDYLHCQ GVVHRDLKPS BACU015447/1-429 DLMKGGELLD RILKQKCFSE REASDVLFII TNTVDYLHCQ GVVHRDLKPS ENSBTAP00000029946/1-701 DLMKGGELLD RILKQKCFSE REASDVLFII TKTVDYLHCQ GVVHRDLKPS bmy_08421T0/1-503 DLMKGGELLD RILKQKCFSE REASDVLFII TNTVDYLHCQ GVVHRDLKPS ENSTTRP00000015949/1-744 DLMKGGELLD RILKQKCFSE REASDVLFII TNTVDYLHCQ GVVHRDLKPS 551 600 ENSP00000262752/1-745 NILYMDESAS ADSIRICDFG FAKQLRGENG LLLTPCYTAN FVAPEVLMQQ BACU015447/1-429 NILYMDESAN ADSIRICDFG FAKQLRGENG LLLTPCYTAN FVAPEVLIQQ ENSBTAP00000029946/1-701 NILYMDESAN ADSIRICDFG FAKQLRGENG LLLTPCYTAN FVAPEVLMQQ bmy_08421T0/1-503 NILYMDESAN ADSIRICDFG FAKQLRGENG LLLTPCYTAN FVAPEVLMQQ ENSTTRP00000015949/1-744 NILYVDESAN ADSIRICDFG FAKQLRGENG LLLTPCYTAN FVAPEVLMQQ 601 650 ENSP00000262752/1-745 GYDAACDIWS LGVLFYTMLA GYTPFANGPN DTPEEILLRI GNGKFSLSGG BACU015447/1-429 GYDAACDIWS LGVLFYTMLA GYTPFANGPN DTPEEILLRI GNGKFSLSGG ENSBTAP00000029946/1-701 GYDAACDIWS LGVLFYTMLA GYTPFANGPN DTPEEILLRI GNGKFSLSGG bmy_08421T0/1-503 GYDAACDIWS LGVLFYTMLA GYTPFANGPN DTPEEILLRI GNGKFSLSGG ENSTTRP00000015949/1-744 GYDAACDIWS LGVLFYTMLA GYTPFANGPN DTPEEILLRI GNGKFSLSGG 651 700 ENSP00000262752/1-745 NWDNISDGAK DLLSHMLHMD PHQRYTAEQI LKHSWITHRD QLPNDQPKRN BACU015447/1-429 NWDSISDGAK G-SPYI---- -------TVC LEQSWFM--- ---------- ENSBTAP00000029946/1-701 NWDSISDGAK DLLSHMLHMD PQQRYTTEQV LKHSWITHRD QLPDDQPSRN bmy_08421T0/1-503 NWDSISDGAK SIHIYV---- ---------- ----WIEED- ---------- ENSTTRP00000015949/1-744 NWDSISDGAK DLLSHMLHMD PQQRYTTEQV LKHSWITHRD QLPNDQPSRN 701 750 ENSP00000262752/1-745 DVSHVVKGAM VATYSALTHK TFQPVLEPVA ASSLAQRRSM KKRTSTGL BACU015447/1-429 --------PL ALNFPILDNK LYGHLSFNCP ---------- -------- ENSBTAP00000029946/1-701 GSSHVVKGAV VATYSALTHK TFQPVLEPVA ASSLAQRRSM KKRTSTGL bmy_08421T0/1-503 ------KG-- ---------- ---------- ---------- -------- ENSTTRP00000015949/1-744 DTSHVVKGAV VATYSALTHK TFQPVLEPVA ASSLAQRRSM KKRTSTGL