KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:39:58 2014 Check: 00 .. Name: ENSTTRP00000013682/1-411 Len: 415 Check: 577 Weight: 1.00 Name: bmy_07797T0/1-366 Len: 415 Check: 4024 Weight: 1.00 Name: ENSP00000309096/1-415 Len: 415 Check: 6098 Weight: 1.00 Name: ENSBTAP00000030011/1-415 Len: 415 Check: 6908 Weight: 1.00 Name: BACU003507/1-415 Len: 415 Check: 5643 Weight: 1.00 // 1 50 ENSTTRP00000013682/1-411 MQMSYAIRCA FYQLLLAALM LVAMLQLLYL SLLSGLHGQE EQDQYFEFFP bmy_07797T0/1-366 MQMSYAIRCA FYQLLLAALM LVAMLQLLYL SLLSGLHGQE EQDQYFEFFP ENSP00000309096/1-415 MQMSYAIRCA FYQLLLAALM LVAMLQLLYL SLLSGLHGQE EQDQYFEFFP ENSBTAP00000030011/1-415 MQMSYAIRCA FYQLLLAALM LVAMLQLLYL SLLSGLHGQE EQDQYFEFFP BACU003507/1-415 MQMSYAIRCA FYQLLLAALM LVAMLQLLYL SLLSGLHGQE EQDQYFEFFP 51 100 ENSTTRP00000013682/1-411 PSPRSVDQVK AQLRTALASK HT--HTGDYR VYRGXXXXXX XXXXXXXXXX bmy_07797T0/1-366 PSPRSVDQVK AQLRTALASG GVLDASGDYR VYRGLLKTTM DPNDVILATH ENSP00000309096/1-415 PSPRSVDQVK AQLRTALASG GVLDASGDYR VYRGLLKTTM DPNDVILATH ENSBTAP00000030011/1-415 PSPRSVDQVK AQLRTALASG GVLDASGDYR VYRGLLKTTM DPNDVILATH BACU003507/1-415 PSPRSVDQVK AQLRTALASG GVLDASGDYR VYRGLLKTTM DPNDVILATH 101 150 ENSTTRP00000013682/1-411 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_07797T0/1-366 ASVDNLLHLS GLLERWEGPL SVSVFAATKE EAQLATVLTY ALSSHCPDMR ENSP00000309096/1-415 ASVDNLLHLS GLLERWEGPL SVSVFAATKE EAQLATVLAY ALSSHCPDMR ENSBTAP00000030011/1-415 ASVDNLLHLS GLLERWEGPL SVSVFAATKE EAQLATVLTY ALSSHCPDMR BACU003507/1-415 ASVDNLLHLS GLLERWEGPL SVSVFAATKE EAQLATVLTY ALSSHCPDMR 151 200 ENSTTRP00000013682/1-411 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX RVAQPGINYA bmy_07797T0/1-366 ARVAMHLVCP SRYEAAVPDP REPGEFALLR SCQEVFDKLA RVAQPGINYA ENSP00000309096/1-415 ARVAMHLVCP SRYEAAVPDP REPGEFALLR SCQEVFDKLA RVAQPGINYA ENSBTAP00000030011/1-415 ARVAMHLVCP SRYEAAVPDP REPGEFALLR SCQEVFDKLA RVAQPGVNYA BACU003507/1-415 ARVAMHLVCP SRYEAAVPDP REPGEFALLR SCQEVFDKLA RVAQPGINYA 201 250 ENSTTRP00000013682/1-411 LSTNVSYPNN -LRNLAREGA NYAVVIDVDM VPSEGLWRGL REMLDQSKQW bmy_07797T0/1-366 LGTNVSYPNN LLRNLAREGA NYALVIDVDM VPSEGLWRGL REMLDQSKQW ENSP00000309096/1-415 LGTNVSYPNN LLRNLAREGA NYALVIDVDM VPSEGLWRGL REMLDQSNQW ENSBTAP00000030011/1-415 LGTNVSYPNN LLRNLAREGA NYALVIDVDM VPSEGLWRSL REMLDQSKQW BACU003507/1-415 LGTNVSYPNN LLRNLAREGA NYALVIDVDM VPSEGLWRGL REMLDQSKQW 251 300 ENSTTRP00000013682/1-411 AGTALVVPAF EIRRARRMPT NKNELLQLYQ VGEVRPFYYG LCTPCQAPTN bmy_07797T0/1-366 AGTALVVPAF EIRRARRMPT NKNELLQLYQ VGEVRPFYYG LCTPCQAPTN ENSP00000309096/1-415 GGTALVVPAF EIRRARRMPM NKNELVQLYQ VGEVRPFYYG LCTPCQAPTN ENSBTAP00000030011/1-415 AGTALVVPAF EIRRARRMPM NKNELLQLYQ VGEVRPFYYG LCTPCQAPTN BACU003507/1-415 AGTALVVPAF EIRRARRMPT NKNELLQLYQ VGEVRPFYYG LCTPCQAPTN 301 350 ENSTTRP00000013682/1-411 YSRWVNLPEE TLLRPAYVVP WQDPWEPFYV AGGKVPNFDE RFRQYGFNRI bmy_07797T0/1-366 YSRWVNLPEE TLLRPAYVVP WQDPWEPFYV AGGKVPNFDE RFRQYGFNRI ENSP00000309096/1-415 YSRWVNLPEE SLLRPAYVVP WQDPWEPFYV AGGKVPTFDE RFRQYGFNRI ENSBTAP00000030011/1-415 YSRWVNLPEE TLLRPAYVVP WQDPWEPFYV AGGKVPTFDE RFRQYGFNRI BACU003507/1-415 YSRWVNLPEE TLLRPAYVVP WQDPWEPFYV AGGKVPNFDE RFRQYGFNRI 351 400 ENSTTRP00000013682/1-411 SQACELHVAG FDFEVLNEGF LVHKGFKEAL KFHPQKEAEN QHNKILFRQF bmy_07797T0/1-366 SQVLIRERAG ---EMGQDG- ---------- ---------- ---------- ENSP00000309096/1-415 SQACELHVAG FDFEVLNEGF LVHKGFKEAL KFHPQKEAEN QHNKILYRQF ENSBTAP00000030011/1-415 SQACELHVAG FDFEVLNEGF LVHKGFKEVL KFHPQKEAEN QHNKILYRQF BACU003507/1-415 SQACELHVAG FDFEVLNEGF LVHKGFKEAL KFHPQKEAEN QHNKILYRQF 401 450 ENSTTRP00000013682/1-411 KQELKAK-PD SPRHC bmy_07797T0/1-366 ---------- ----- ENSP00000309096/1-415 KQELKAKYPN SPRRC ENSBTAP00000030011/1-415 KQELKAKYPD SPRHC BACU003507/1-415 KQELKAKYPD SPRHC