KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:39:59 2014 Check: 00 .. Name: bmy_07825T0/1-703 Len: 776 Check: 4166 Weight: 1.00 Name: BACU003530/1-605 Len: 776 Check: 1622 Weight: 1.00 Name: ENSTTRP00000001762/1-512 Len: 776 Check: 6431 Weight: 1.00 Name: ENSP00000427130/1-605 Len: 776 Check: 7402 Weight: 1.00 Name: ENSBTAP00000030033/1-581 Len: 776 Check: 6994 Weight: 1.00 // 1 50 bmy_07825T0/1-703 RWALLRLGAD GRRGGRARPE AEAEPGRPRR AHRPARDEAL RPSMAGPGPT BACU003530/1-605 ---------- ---------- MLSLRVTTAR EQSWPEGKRV NVAASGLEPA ENSTTRP00000001762/1-512 ---------- ---------- ---------- ---------- ---------- ENSP00000427130/1-605 ---------- ---------- ---------- ---------- ---MAGPGPT ENSBTAP00000030033/1-581 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_07825T0/1-703 FPLHRLVWAN -RHRELEAAL NSR-QHDIEQ EDPRGRTPLE LAVSLGNLES BACU003530/1-605 DGLHGTSGTE VSQRELKCGP GGGIRHDIEQ EDPRGRTPLE LAVSLGNLES ENSTTRP00000001762/1-512 ---------- ---------- ---------- ---------- ---------- ENSP00000427130/1-605 FPLHRLVWAN -RHRELEAAL HSH-QHDIEQ EDPRGRTPLE LAVSLGNLES ENSBTAP00000030033/1-581 ---------- -------AVS HLP-QHDIEQ EDPRGRTPLE LAVSLGNLES 101 150 bmy_07825T0/1-703 VRVLLRHNAN VGKESCQGWA VLQEAVSTGD PEMVQLVLQY RDYQRATQRL BACU003530/1-605 VRVLLRHNAN VGKESCQGWA VLQEAVSTGD PEMVQLVLQY RDYQRATQRL ENSTTRP00000001762/1-512 ---------- ---------- ---------- --MVQLVLQY RDYQRATQRL ENSP00000427130/1-605 VRVLLRHNAN VGKENRQGWA VLQEAVSTGD PEMVQLVLQY RDYQRATQRL ENSBTAP00000030033/1-581 VRVLLRHNAN VGKESCQGWA VLQEAVSTGD PEMVQLVLQY RDYQRAMQRL 151 200 bmy_07825T0/1-703 AGIPELLNKL RQAPDFYVEM KWEFTSWVPL VSKMCPSDVY RVWKRGENLR BACU003530/1-605 AGIPELLNKL RQAPDFYVEM KWEFTSWVPL VSKMCPSDVY RVWKRGENLR ENSTTRP00000001762/1-512 AGIPELLNKL RQAPDFYVEM KWEFTSWVPL VSKMCPSDVY RVWKRGENLR ENSP00000427130/1-605 AGIPELLNKL RQAPDFYVEM KWEFTSWVPL VSKMCPSDVY RVWKRGESLR ENSBTAP00000030033/1-581 AGIPELLNKL RQAPDFYVEM KWEFTSWVPL VSKMCPSDVY RVWKRGESLR 201 250 bmy_07825T0/1-703 VDTSLLGFEH MTWQRGRRSF IFKGQEAGAL VMEVDHDRQL VHTETLGLTL BACU003530/1-605 VDTSLLGFEH MTWQRGRRSF IFKGQEAGAL VMEVDHDRQL VHTETLGLTL ENSTTRP00000001762/1-512 VDTSLLGFEH MTWQRGRRSF IFKGQEAGAL VMEVDHDRQL VHTETLGLTL ENSP00000427130/1-605 VDTSLLGFEH MTWQRGRRSF IFKGQEAGAL VMEVDHDRQV VHVETLGLTL ENSBTAP00000030033/1-581 VDTSLLGFEH MTWQRGRRSF IFKGQEAGAL VMEVDHDRQV VHTETLGLAL 251 300 bmy_07825T0/1-703 HEPEALLATM RPSEEHVASR LTSPIVSTHL DTRNVAFERN KCGIWGWRSE BACU003530/1-605 HEPEALLATM RPSEEHVASR LTSPIVSTHL DTRNVAFERN KCGIWGWRSE ENSTTRP00000001762/1-512 HEPEALLATM RPSEEHVASR LTSPIVSTHL DTRNVAFERN KCGIWGWRSE ENSP00000427130/1-605 QEPETLLAAM RPSEEHVASR LTSPIVSTHL DTRNVAFERN KCGIWGWRSE ENSBTAP00000030033/1-581 HEPEALLAAM RPSEEHVASR LTSPIVSTHL DTRNVAFERN KCGIWGWRSE 301 350 bmy_07825T0/1-703 KMETVSGYEA KAGEASGGSW GRRRGPGALP LLHIHPVWRE RPSSPWAPDA BACU003530/1-605 KMETVSGYEA KAGEAS---- ---------- ---------- ---------- ENSTTRP00000001762/1-512 KMETVSGYEA KVYSAT---- ---------- --NVELVTRT RTEHLSDQDK ENSP00000427130/1-605 KMETVSGYEA KVYSAT---- ---------- --NVELVTRT RTEHLSDQDK ENSBTAP00000030033/1-581 KMETVSGYEA KVYSAT---- ---------- --NVELVTRT RTEHLSDQDK 351 400 bmy_07825T0/1-703 LCGHGNSVGP ECPAPAEHAG VTHSTGPYPD HRDEARSILP SLLPLCPPCS BACU003530/1-605 ----G----- ---------- ---------- ----GKTPFQ SFLGLP---- ENSTTRP00000001762/1-512 SRSKG----- ---------- ---------- ----GKTPFQ SFLGMA---- ENSP00000427130/1-605 SRSKA----- ---------- ---------- ----GKTPFQ SFLGMA---- ENSBTAP00000030033/1-581 ARIKG----- ---------- ---------- ----GKTPFQ SFLGMA---- 401 450 bmy_07825T0/1-703 PGVQRHQCGA GDTHTHGAPL RSGQVEEQRG EDSIPVLPGD GPAALLPQWG BACU003530/1-605 ---QQHSSHN G--------- ---------- ---------- ---------- ENSTTRP00000001762/1-512 ---QQHSSHN G--------- ---------- ---------- ---------- ENSP00000427130/1-605 ---QQHSSHT G--------- ---------- ---------- ---------- ENSBTAP00000030033/1-581 ---QQHSSHN G--------- ---------- ---------- ---------- 451 500 bmy_07825T0/1-703 EPGLGGRGLG ADWKAHWAGP GRRLPSAKPG PGATQAPVQQ AASPTNPTAI BACU003530/1-605 ---------- ---------- ---------- -----APVQQ AASPTNPTAI ENSTTRP00000001762/1-512 ---------- ---------- ---------- -----APVQQ AASPTNPTAI ENSP00000427130/1-605 ---------- ---------- ---------- -----APVQQ AASPTNPTAI ENSBTAP00000030033/1-581 ---------- ---------- ---------- -----APVQQ AASPTNPTAI 501 550 bmy_07825T0/1-703 SPDEYFDPNF SLESRNIGRP IEMSSKVQRF KATLWLSEEH PLSLGDQVMP BACU003530/1-605 SPDEYFDPNF SLESRNIGRP IEMSSKVQRF KATLWLSEEH PLSLGDQVMP ENSTTRP00000001762/1-512 SPDEYFDPNF SLESRNIGRP IEMSSKVQRF KATLWLSEEH PLSLGDQVMP ENSP00000427130/1-605 SPEEYFDPNF SLESRNIGRP IEMSSKVQRF KATLWLSEEH PLSLGDQVTP ENSBTAP00000030033/1-581 SPDEYFDPNF SLESRNIGRP IEMSSKVQRF KATLWMSEEH PLSLGDQVTP 551 600 bmy_07825T0/1-703 IIDLMAISNA HFAKLRDFIT LRLPPGFPVK IEIPLFHVLN ARITFSNLCG BACU003530/1-605 IIDLMAISNA HFAKLRDFIN LRLPPGFPVK IEIPLFHVLN ARITFSNLCG ENSTTRP00000001762/1-512 IIDLMAISNA HFAKLRDFIT LRLPPGFPVK IEIPLFHVLN ARITFSNLCG ENSP00000427130/1-605 IIDLMAISNA HFAKLRDFIT LRLPPGFPVK IEIPLFHVLN ARITFSNLCG ENSBTAP00000030033/1-581 IIDLMAISNA HFAKLRDFIT LRLPPGFPVK IEIPLFHVLN ARITFSNLCG 601 650 bmy_07825T0/1-703 CDEPLSSVWV PAPGSAIAAS ASPFPCEVDP AVFEVPDGYS VLGTERSEPL BACU003530/1-605 CDEPLSSVWV PAPGSAIAAS ASPFPCEVDP AVFEVPDGYS VLGAERSEPL ENSTTRP00000001762/1-512 CDEPLSSVWV PAPGSAIAAS ASPFPCEVDP AVFEVPDGYS VLGAERSEPL ENSP00000427130/1-605 CDEPLSSVWV PAPSSAVAAS GNPFPCEVDP TVFEVPNGYS VLGMERNEPL ENSBTAP00000030033/1-581 CDEPLSSVWV PAPGSAVATS GNPFPCEVDP AVFEVPEGYS VLGAERSEPL 651 700 bmy_07825T0/1-703 RDEDDDLLQF AIQQSLLEAG TEAEQVTVWE ALTNTRPGAH -LPQVTAYEE BACU003530/1-605 RDEDDDLLQF AIQQSLLEAS TETEQVTVWE ALTNTRPGAH -LPQVTAYEE ENSTTRP00000001762/1-512 RDEDDDLLQF AIQQSLLEAG TEAEQVTVWE ALTNTRPGAH -LPQVTAYEE ENSP00000427130/1-605 RDEDDDLLQF AIQQSLLEAG TEAEQVTVWE ALTNTRPGAR PPPQATVYEE ENSBTAP00000030033/1-581 RDEDDDLLQF AIQQSLLEAG TEAEQVTVWE ALTNTRPGVH -HAQATAYEE 701 750 bmy_07825T0/1-703 QLQLER---- ---------- ---------- ---------- ---------- BACU003530/1-605 QLQLERALQE SLQMSIEPRG LGSPHGTPPA --PPSFEEQL RLALELSSRE ENSTTRP00000001762/1-512 QLQLERALQE SLQMSTEPEG PGAPLRA--- --PPSFEEQL RLALELSARE ENSP00000427130/1-605 QLQLERALQE SLQLSTEPRG PGSPPRTPPA PGPPSFEEQL RLALELSSRE ENSBTAP00000030033/1-581 QLQLERALQE SLRMSTEPGG PGSPHRTPPT PAPPSFEEQL RLALELSSQE 751 800 bmy_07825T0/1-703 ---------- ---------- ------ BACU003530/1-605 EEERERRGRQ EEEDFQGVLQ LSLTEH ENSTTRP00000001762/1-512 QAEWERRGRR EEEDLQRTLQ RSLTEL ENSP00000427130/1-605 QEERERRGQQ EEEDLQRILQ LSLTEH ENSBTAP00000030033/1-581 QEERERLGQQ EEEDLQRILQ LSLTEH